Characterization of marker chromosomes by microdissection and fluorescence in situ hybridization

We characterized by microdissection and fluorescence in situ hybridization (FISH) two marker chromosomes: (1) a de novo, acrocentric marker chromosome detected in 88 per cent of the amniotic fluid cells of one of two physically and developmentally normal twins; and (2) a metacentric marker chromosome present in a phenotypically normal female. Analysis of FISH probes developed from the marker chromosomes indicated that the marker chromosomes in cases 1 and 2 were del(14)(q11) and a derivative chromosome from a Robertsonian translocation, respectively. Microdissection in combination with FISH may prove to be a valuable technique in determining the chromosomal origin of de novo marker chromosomes and unbalanced structural rearrangements detected during prenatal diagnosis.     

QUALITY OF HYDROMETEOROLOGICAL DATA IN COLD REGIONS1

ABSTRACT: Many users of hydrometeorological records are not aware of the number of inconsistencies and biases that occur in hydrometeorological records. Examples are presented illustrating how the exposures of sites for measurement of precipitation, wind, snow on the ground, and evaporation determine to a large extent how useful the records are for estimating areal conditions. For areas where precipitation in the form of snow produces a significant portion of the runoff, a smaller number of quality records may be more valuable for modeling than a much larger number of records of lower quality. Information is presented to show that the overall value of an operational hydrometeorological network is dependent upon how consistent and representative of average conditions the collected records are, especially for mountainous areas in cold regions.     

Source characterization of ambient fine particles at multiple sites in the Seattle area

To identify major PM_2.5 (particulate matter ≤2.5 μm in aerodynamic diameter) sources with a particular emphasis on the ship engine emissions from a major port, integrated 24 h PM_2.5 speciation data collected between 2000 and 2005 at five United State Environmental Protection Agency's Speciation Trends Network monitoring sites in Seattle, WA were analyzed. Seven to ten PM_2.5 sources were identified through the application of positive matrix factorization (PMF). Secondary particles (12–26% for secondary nitrate; 17–20% for secondary sulfate) and gasoline vehicle emissions (13–31%) made the largest contributions to the PM_2.5 mass concentrations at all of the monitoring sites except for the residential Lake Forest site, where wood smoke contributed the most PM_2.5 mass (31%). Other identified sources include diesel vehicle emissions, airborne soil, residual oil combustion, sea salt, aged sea salt, metal processing, and cement kiln. Residual oil combustion sources identified at multiple monitoring sites point clearly to the Port of Seattle suggesting ship emissions as the source of oil combustion particles. In addition, the relationship between sulfate concentrations and the oil combustion emissions indicated contributions of ship emissions to the local sulfate concentrations. The analysis of spatial variability of PM_2.5 sources shows that the spatial distributions of several PM_2.5 sources were heterogeneous within a given air shed.     

Sources of Fine Particulate Species in Ambient Air over Lake Champlain Basin,VT

Abstract

This study is a part of an ongoing investigation of the types and locations of emission sources that contribute fine particulate air contaminants to Underhill, VT. The air quality monitoring data used for this study are from the Interagency Monitoring of Protected Visual Environments network for the period of 2001–2003 for the Underhill site. The main source-receptor modeling techniques used are the positive matrix factorization (PMF) and potential source contribution function (PSCF). This new study is intended as a comparison to a previous study of the 1988–1995 Underhill data that successfully revealed a total of 11 types of emission sources with significant contributions to this rural site. This new study has identified a total of nine sources: nitrate-rich secondary aerosol, wood smoke, East Coast oil combustion, automobile emission, metal working, soil/dust, sulfur-rich aerosol type I, sulfur-rich aerosol type II, and sea salt/road salt. Furthermore, the mass contributions from the PMF identified sources that correspond with sampling days with either good or poor visibility were analyzed to seek possible correlations. It has been shown that sulfur-rich aerosol type I, nitrate aerosol, and automobile emission are the most important contributors to visibility degradation. Soil/dust and sea salt/road salt also have an added effect.     

ESTIMATED STREAM FLOW REQUIREMENTS FOR FISHES OF THE WASHITA RIVER BELOW FOSS RESERVOIR,WESTERN OKLAHOMA1

Velocity and depth preference curves for juvenile and adult red shiners (Notropis lutrensis) were developed for each season of the year. The incremental methodology, developed by the U.S. Fish and Wildlife Service for quantifying the amount of physical habitat available for fish, was applied as a basis for recommending minimum stream flows for life stages of red shiners and channel catfish (Ictalurus punctatus) in the Washita River below Foss Reservoir. The minimum stream flow required to support populations of red shiners and channel catfish was estimated to be 0.60 m³/s during all months except April and May, during which flushing flows of 3.0 m³/s were recommended. Under drought conditions a contingency flow of 0.18 m³/s was recommended for August through March, a flushing flow of 2.4 m³/s for April and May, and a flow of 0.30 m³/s for channel catfish spawning in June and July. Standing crop of adult red shiners per weighted usable area averaged 2.73 g/m² (27 kg/ha) for two sites on the Washita River. A positive relation between standing crop and weighted usable area was suggested. Use of the incremental methodology on the study reach below Foss Reservoir required 96 person-hours of labor, excluding training, travel, and developing preference curves, and a total cost of $1,762, of which $1,200 was for the purchase of equipment.     

Water Management Applications for Satellite Precipitation Products: Synthesis and Recommendations

This article is an assessment of the current state of the art and relative utility of satellite precipitation products (SPPs) for hydrologic applications to support water management decisions. We present a review of SPPs, their accuracy in diverse settings including the influence of geography, topography, and weather systems, as well as the pros and cons of their use for different water management applications. At the end of this broad synthesizing effort, recommendations are proposed for: (1) SPP developers to improve the quality, usability, and relevance of precipitation products; and (2) SPP users to improve the reliability of their predictions and hydrologic applications to better support water management.     

Source identification of atlanta aerosol by positive matrix factorization

Data characterizing daily integrated particulate matter (PM) samples collected at the Jefferson Street monitoring site in Atlanta, GA, were analyzed through the application of a bilinear positive matrix factorization (PMF) model. A total of 662 samples and 26 variables were used for fine particle (particles < or = 2.5 microm in aerodynamic diameter) samples (PM2.5), and 685 samples and 15 variables were used for coarse particle (particles between 2.5 and 10 microm in aerodynamic diameter) samples (PM10-2.5). Measured PM mass concentrations and compositional data were used as independent variables. To obtain the quantitative contributions for each source, the factors were normalized using PMF-apportioned mass concentrations. For fine particle data, eight sources were identified: SO4(2-) -rich secondary aerosol (56%), motor vehicle (22%), wood smoke (11%), NO(3-) -rich secondary aerosol (7%), mixed source of cement kiln and organic carbon (OC) (2%), airborne soil (1%), metal recycling facility (0.5%), and mixed source of bus station and metal processing (0.3%). The SO4(2-) -rich and NO(3-) -rich secondary aerosols were associated with NH(4+). The SO4(2-) -rich secondary aerosols also included OC. For the coarse particle data, five sources contributed to the observed mass: airborne soil (60%), NO(3-)-rich secondary aerosol (16%), SO4(2-) -rich secondary aerosol (12%), cement kiln (11%), and metal recycling facility (1%). Conditional probability functions were computed using surface wind data and identified mass contributions from each source. The results of this analysis agreed well with the locations of known local point sources.     

Improving source apportionment of fine particles in the eastern United States utilizing temperature-resolved carbon fractions

The objectives of this study were to examine the use of carbon fractions to identify particulate matter (PM) sources, especially traffic-related carbonaceous particle sources, and to estimate their contributions to the particle mass concentrations. In recent studies, positive matrix factorization (PMF) was applied to ambient fine PM (PM2.5) compositional data sets of 24-hr integrated samples including eight individual carbon fractions collected at three monitoring sites in the eastern United States: Atlanta, GA, Washington, DC, and Brigantine, NJ. Particulate carbon was analyzed using the Interagency Monitoring of Protected Visual Environments/Thermal Optical Reflectance method that divides carbon into four organic carbons (OC): pyrolized OC and three elemental carbon (EC) fractions. In contrast to earlier PMF studies that included only the total OC and EC concentrations, gasoline emissions could be distinguished from diesel emissions based on the differences in the abundances of the carbon fractions between the two sources. The compositional profiles for these two major source types show similarities among the three sites. Temperature-resolved carbon fractions also enhanced separations of carbon-rich secondary sulfate aerosols. Potential source contribution function analyses show the potential source areas and pathways of sulfate-rich secondary aerosols, especially the regional influences of the biogenic, as well as anthropogenic secondary aerosol. This study indicates that temperature-resolved carbon fractions can be used to enhance the source apportionment of ambient PM2.5.