AIC model selection and multimodel inference in behavioral ecology: some background,observations, and comparisons

We briefly outline the information-theoretic (I-T) approaches to valid inference including a review of some simple methods for making formal inference from all the hypotheses in the model set (multimodel inference). The I-T approaches can replace the usual t tests and ANOVA tables that are so inferentially limited, but still commonly used. The I-T methods are easy to compute and understand and provide formal measures of the strength of evidence for both the null and alternative hypotheses, given the data. We give an example to highlight the importance of deriving alternative hypotheses and representing these as probability models. Fifteen technical issues are addressed to clarify various points that have appeared incorrectly in the recent literature. We offer several remarks regarding the future of empirical science and data analysis under an I-T framework.     

Bioremediation of Dinitrotoluene in Aged Clay and Sandy Soils Using Pseudomonas Organisms,Spizizen Nutrient Medium and Prairie Silt Loam

This article describes the utility of Spizizen medium in effecting the release of 2,4 dinitrotoluene (DNT) from plasticized propellant in aged clay soil and of added Pseudomonas organisms in enhancing the rate of degradation of DNT in clay and sandy soils. DNT is an environmental problem because of its toxicity to mammals. It is proposed that the citrate in Spizizen medium chelates metals that form the aggregates of humin in aged clay soils, thereby releasing propellant components. Lack of awareness of DNT mobilization by citrate or other polyanions may lead to a potential underestimation of the 2,4 DNT present in aged contaminated soil and a potential increased release of DNT following exposure to solvents containing citrate or other polyanions. DNT in contaminated sandy soils was rapidly degraded when Pseudomonas and Spizizen medium were added (85% degraded in 20 days). Pseudomonas isolated/Torn soils at the Badger Plant have particular utility for the in situ degradation of 2,4 DNT in clay and sandy soils because they metabolize Spizizen medium, thrive in diverse climates, and have been selected for their ability to grow in soils contaminated with DNT. Mixture of either the contaminated clay soil or the contaminated sandy soil with uncontaminated prairie silt loam (20:80 ratio) facilitated management of the treatment process. This observation is important because of the widespread distribution, and hence low cost, of this soil type in the central United States.     

Monitoring perchlorate exposure and thyroid hormone status among raccoons inhabiting a perchlorate-contaminated site

Perchlorate is a water soluble anion that is readily accumulated in vegetation. It inhibits uptake of iodide into thyroid gland tissue, thereby reducing production of thyroid hormones. Potential raccoon food items including berries, fish, and vegetation collected at a contaminated site contained quantifiable concentrations of perchlorate as determined by ion chromatography. Therefore, we monitored resident raccoons for exposure to perchlorate by examining plasma perchlorate and thyroid hormone concentrations. Resulting analytical data failed to demonstrate perchlorate exposure among raccoons that likely consumed food items collected along perchlorate-contaminated water bodies. There were no correlations between triiodothyronine or thyroxine and thyroid stimulating hormone concentrations, but triiodothyronine concentrations in raccoon plasma were significantly higher in 2000 than in 2001 (p = 0.0081). These data suggest that natural attenuation and remedial efforts initiated in January of 2001 may have reduced perchlorate exposure among raccoons inhabiting this site from 2000 to 2001. Temporal, spatial, and analytical factors limited our ability to quantify exposure among raccoons, however, our data do not indicate that raccoons currently inhabiting this site are at risk for significant exposure to perchlorate and subsequent effects.     

Evaluating the success of functional restoration after reintroduction of a lost avian pollinator

Conservation translocation is a common method for species recovery, for which one increasingly frequent objective is restoring lost ecological functions to promote ecosystem recovery. However, few conservation translocation programs explicitly state or monitor function as an objective, limiting the ability to test assumptions, learn from past efforts, and improve management. We evaluated whether translocations of hihi (Notiomystis cincta), a threatened New Zealand passerine, achieved their implicit objective of restoring lost pollination function. Through a pollinator-exclusion experiment, we quantified, with log response ratios (lnR), the effects of birds on fruit set and seed quality in hangehange (Geniostoma ligustrifolium), a native flowering shrub. We isolated the contributions of hihi by making comparisons across sites with and without hihi. Birds improved fruit set more at sites without hihi (lnR = 1.27) than sites with hihi (lnR = 0.50), suggesting other avian pollinators compensated for and even exceeded hihi contributions to fruit set. Although birds improved seed germination only at hihi sites (lnR = 0.22–0.41), plants at sites without hihi had germination rates similar to hihi sites because they produced 26% more filled seeds, regardless of pollination condition. Therefore, although our results showed hihi improved seed quality, they also highlighted the complexity of ecological functions. When an important species is lost, ecosystems may be able to achieve similar function through different means. Our results underscore the importance of stating and monitoring the ecological benefits of conservation translocations when functional restoration is a motivation to ensure these programs are achieving their objectives.     

THE IMPORTANCE OF BEAVER TO WETLAND HABITATS AND WATERFOWL IN WYOMING1

ABSTRACT: Beaver (Castor canadensis) are habitat‐modifying keystone species, and their activities broadly influence many other plants and animals. Beaver are especially important to waterfowl in the western U.S. where riparian and wetland habitats comprise less than 2 percent of the landscape yet provide habitat for greater than 80 percent of wildlife species. Wyoming is currently ranked sixth of the 50 states in the size of its breeding waterfowl population, and beaver ponds may play a significant role in providing habitat for these birds. The objectives of this research were to: (1) identify streams in Wyoming where beaver are currently present, extirpated, or used to manage riparian habitat; (2) identify areas where beaver could be relocated to create wetlands and improve riparian habitat; (3) compare wetland surface areas between areas that have beaver with those that did not; and (4) compare waterfowl numbers in areas with and without beaver. Using a survey of 125 land managers in Wyoming, we found that beaver have been removed from 23 percent (6,497 kin) of the streams for which managers had direct knowledge (28,297 kin). The same managers estimated that there are over 3,500 km of streams where beaver could improve habitat conditions. The riparian width in streams with beaver ponds averaged 33.9 m (95 percent CI = 25.1–42.7 m) in contrast to 10.5 m (CI = 8.6–12.4 m) in streams without beaver. During waterfowl surveys we counted 7.5 ducks/km (CI = O.9–14.4 ducks/kin) of stream in areas with beaver ponds and only O.1 ducks/km (no CIs calculated) of stream in similar areas without beaver present. Beginning in 1994, we restored beaver to 14 streams throughout Wyoming in an effort to create wetlands and improve riparian habitat. Waterfowl have been quick to respond to these important habitats. We feel that beaver restoration and management can be used to improve habitat in drainages where conflicts with other land uses are minimal.     

Rainfall and soils modify plant community response to grazing in Serengeti National Park

Terrestrial plant community responses to herbivory depend on resource availability, but the separate influences of different resources are difficult to study because they often correlate across natural environmental gradients. We studied the effects of excluding ungulate herbivores on plant species richness and composition, as well as available soil nitrogen (N) and phosphorus (P), across eight grassland sites in Serengeti National Park (SNP), Tanzania. These sites varied independently in rainfall and available soil N and P. Excluding herbivores decreased plant species richness at all sites and by an average of 5.4 species across all plots. Although plant species richness was a unimodal function of rainfall in both grazed and ungrazed plots, fences caused a greater decrease in plant species richness at sites of intermediate rainfall compared to sites of high or low rainfall. In terms of the relative or proportional decreases in plant species richness, excluding herbivores caused the strongest relative decreases at lower rainfall and where exclusion of herbivores increased available soil P. Herbivore exclusion increased among-plot heterogeneity in species composition but decreased coexistence of congeneric grasses. Compositional similarity between grazed and ungrazed treatments decreased with increasing rainfall due to greater forb richness in exclosures and greater sedge richness outside exclosures and was not related to effects of excluding herbivores on soil nutrients. Our results show that plant resources, especially water and P, appear to modulate the effects of herbivores on tropical grassland plant diversity and composition. We show that herbivore effects on soil P may be an important and previously unappreciated mechanism by which herbivores influence plant diversity, at least in tropical grasslands.     

Muskox status,recent variation,and uncertain future

Ambio - Muskoxen (Ovibos moschatus) are an integral component of Arctic biodiversity. Given low genetic diversity, their ability to respond to future and rapid Arctic change is unknown, although...     

Characterization of Benthic Communities and Physical Habitat in the Stanislaus, Tuolumne, and Merced Rivers, California

The primary goal of this study was to characterize physical habitat and benthic communities (macroinvertebrates) in the Stanislaus, Tuolumne and Merced Rivers in California’s San Joaquin Valley in 2003. These rivers have been listed as impaired water bodies (303 (d) list) by the State of California due to the presence of organophosphate (OP) insecticides chlorpyrifos and diazinon, Group A pesticides (i.e., organochlorine pesticides), mercury, or unknown toxicity. Based on 10 instream and riparian physical habitat metrics, total physical habitat scores in the Stanislaus River ranged from 124 to 188 (maximum possible total score is 200). The highest total habitat score was reported at the upstream site. Tuolumne River physical habitat scores ranged from 86 to 167. Various Tuolumne River physical habitat metrics, including total habitat score, increased from downstream to upstream in this river. Merced River physical habitat scores ranged from 121 to 170 with a significant increase in various physical habitat metrics, including total habitat score, reported from downstream to upstream. Channel flow (an instream metric) and bank stability (a riparian metric) were the most important physical habitat metrics influencing the various benthic metrics for all three rivers. Abundance measures of benthic macroinvertebrates (5,100 to 5,400 individuals) were similar among the three rivers in the San Joaquin watershed. Benthic communities in all three rivers were generally dominated by: (1) Baetidae species (mayflies) which are a component of EPT taxa generally considered sensitive to environmental degradation; (2) Chironomidae (midges) which can be either tolerant or sensitive to environmental stressors depending on the species; (3) Ephemerellidae (mayflies) which are considered sensitive to pollution stress; and (4) Naididae (aquatic worms) which are generally considered tolerant to environmental stressors. The presence of 117 taxa in the Stanislaus River, 114 taxa in the Tuolumne River and 96 taxa in the Merced River implies that the benthic communities in these streams are fairly diverse but without a clear definition of benthic community expectations it is unknown if these water bodies are actually impaired.     

Development of an extraction method for perchlorate in soils

Perchlorate originates as a contaminant in the environment from its use in solid rocket fuels and munitions. The current US EPA methods for perchlorate determination via ion chromatography using conductivity detection do not include recommendations for the extraction of perchlorate from soil. This study evaluated and identified appropriate conditions for the extraction of perchlorate from clay loam, loamy sand, and sandy soils. Based on the results of this evaluation, soils should be extracted in a dry, ground (mortar and pestle) state with Milli-Q water in a 1 ratio 1 soil ratio water ratio and diluted no more than 5-fold before analysis. When sandy soils were extracted in this manner, the calculated method detection limit was 3.5 microg kg(-1). The findings of this study have aided in the establishment of a standardized extraction method for perchlorate in soil.     

Hyperspectral Characteristics of Canopy Components and Structure for Phenological Assessment of an Invasive Weed

Spectral reflectance values of four canopy components (stems, buds, opening flowers, and postflowers of yellow starthistle (Centaurea solstitialis)) were measured to describe their spectral characteristics. We then physically combined these canopy components to simulate the flowering stage indicated by accumulated flower ratios (AFR) 10%, 40%, 70%, and 90%, respectively. Spectral dissimilarity and spectral angles were calculated to quantitatively identify spectral differences among canopy components and characteristic patterns of these flowering stages. This study demonstrated the ability of hyperspectral data to characterize canopy components, and identify different flowering stages. Stems had a typical spectral profile of green vegetation, which produced a spectral dissimilarity with three reproduction organs (buds, opening flowers, and postflowers). Quantitative differences between simulated flower stages depended on spectral regions and phenological stages examined. Using full-range canopy spectra, the initial flowering stage could be separated from the early peak, peak, and late flowering stages by three spectral regions, i.e. the blue absorption (around 480 nm) and red absorption (around 650 nm) regions and NIR plateau from 730 nm to 950 nm. For airborne CASI data, only the red absorption region and NIR plateau could be used to identify the flowering stages in the field. This study also revealed that the peak flowering stage was more easily recognized than any of the other three stages.