Virus Genome Quantification Does not Predict Norovirus Infectivity After Application of Food Inactivation Processing Technologies

When determining the effect of food processing on the infectivity of any contaminating virus, it is necessary to distinguish unambiguously between infectious and non-infectious viruses present. However, this can be difficult in the particular case of noroviruses (NoVs) because no reliable cell culture model is available. The aim of this study was to assess the use of molecular methods—RT real-time PCR (RT-qPCR) and enzymatic treatment (ET) coupled to RT-qPCR—to quantify the infectivity of NoV after application of various inactivating food-processing technologies. RT-qPCR and ET-RT-qPCR gave significantly different (P < 0.01) results concerning the reduction in viral genome counts by all inactivation procedures and conditions used, except for HHP treatment at 600 MPa for 5 min. These findings indicate that the ET prior to RT-qPCR has an effect on the estimation of the reduction of virus genome counts, and may eliminate genomes of affected virus particles. However, no correlation was found between the results obtained by ET-RT-qPCR and those obtained by cell culture. Therefore, the effect is presumably only partial, and not adequate to allow accurate estimation of virus inactivation. Consequently, our results indicate that the quantification of virus genomes by PCR, regardless of prior ET, is not adequate for establishing virus inactivation and/or infectivity. In addition, our results also illustrate that the general effect of virus inactivation is not directly correlated to effects on the integrity of virus genome and protein capsid. Presumably, inactivation by food processing is the consequence of effects on proteins involved in adhesion and invasion stages.     

Bird Species Assemblages as Indicators of Biological Integrity in Great Basin Rangeland

The study evaluates the potential for bird species assemblages to serve as indicators of biological integrity of rangelands in the Great Basin in much the same way that fish and invertebrate assemblages have been used as indicators in aquatic environments. Our approach was to identify metrics of the bird community using relatively simple sampling methods that reflect the degree of rangeland degradation and are consistent over a variety of vegetation types and geographic areas. We conducted the study in three range types (i.e., potential natural plant community types) in each of two widely separated areas of the Great Basin: south-eastern Idaho (sagebrush steppe range types) and west-central Utah (salt-desert shrub range types). Sites were selected in each range type to represent three levels of grazing impact, and in Idaho included sites modified for crested wheatgrass production. Birds were sampled by point counts on 9 100-m radius plots at 250-m spacing on each of 20 sites in each area during the breeding season. In sagebrush-steppe, 964 individuals in 8 species of passerine birds were used in analyses. Five metrics were significantly related to impact class, both when analyzed within range type and when analyzed with all range types combined. Species richness, relative abundance of shrub obligate species, and relative abundance of Brewer's sparrow were generally lower for the higher impact classes, whereas the reverse was true for dominance by a single species and for relative abundance of horned larks. In contrast, total number of individuals did not differ significantly as a function of impact class. In salt-desert shrub, a total of 843 birds in 4 species were included in analyses, 98% of which were horned larks. None of the metrics identified above was significantly related to impact class. Two metrics for breeding birds in sagebrush steppe (species richness and dominance) showed little overlap between values for the extremes of impact class, and thus they have potential as indicators of biological integrity. However, the sensitivity of these metrics appears to be greatest at the high impact end of the spectrum, which suggests they may have limited utility in distinguishing between sites having light and moderate impact.     

The Integration of Environmental Sustainability Considerations into EU Development Policy: A Case Study of the LEADER Initiative in the West of Ireland

In peripheral parts of Europe such as the West of Ireland, where environment-development tensions may be particularly sensitive, environmental sustainability principles need to be integrated into all policy and programme areas, as the Fifth Environmental Action programme requires. This paper examines the small but significant LEADER rural development initiative to assess how much its operation integrates sustainability considerations. While LEADER-supported projects are often environmentally benign, there is little evidence of proactive application in LEADER group strategies of sustainability criteria which are other than weak. Economic imperatives dominate LEADER programmes, and many actors are sanguine about potential environmental problems arising from development.     

Adaptive peaks and alternative foraging tactics in brook charr: evidence of short-term divergent selection for sitting-and-waiting and actively searching

Some recently emerged brook charr (Salvelinus fontinalis) inhabiting still-water pools along the sides of streams are sedentary and eat crustaceans from the lower portion of the water column. Others are more active and eat insects from the upper portion of the water column. We provide evidence that this divergent foraging behavior reflects short-term divergent selection brought about by intraspecific competition in the presence of alternative food sources. Rates of encounters and interactions between individuals were density dependent, and encounter and interaction events were closely timed with prey capture attempts. In addition, aggressive fish made more foraging attempts per minute than nonaggressive fish. Aggressive fish were also either inactive or very active, while nonaggressive fish exhibited intermediate levels of activity. Growth rate potential, an important component of fitness during the early life stages of brook charr, was assessed using tissue concentrations of RNA and found to be highest for sedentary fish and for active fish making frequent foraging attempts, and lower for fish exhibiting intermediate levels of activity. Our findings support contentions that individual behavior plays an important role during initial steps in the evolution of resource polymorphisms. Received: 27 July 1998 / Accepted after revision: 16 November 1998     

Imperfect female choice and male mating skew on leks of different sizes

We present a model of error-prone female choice on leks, and investigate the effects of different degrees of error on the distribution of mating success among males present at leks of different sizes. At higher levels of error, the best male is predicted to gain a smaller share of matings, while low-ranking males gain a larger share. Males who are of high rank but not the most desirable on the lek do best at intermediate levels of error, since the top-ranked male does not then claim all the matings, but assessment is still sufficiently accurate for females to discriminate between high-ranking and low-ranking competitors. The effects of error are shown to be more pronounced on larger leks, due to smaller expected differences in mating value between males of adjacent ranks. This interaction between lek size and error suggests that observed negative relationships between lek size and mating skew need not be attributed solely to intrasexual competition, as previously suggested, but could also be a result of imperfect choice. Received: 20 February 1998 / Accepted after revision: 25 October 1998     

Plethodontid Salamander Response to Silvicultural Practices in Missouri Ozark Forests

Abstract: There is little information on the effects of tree harvest on salamander populations in the midwestern United States. We present data on plethodontid salamander densities in replicated stands of three forest age classes in the southeastern Ozarks of Missouri. Forest age classes consisted of regeneration-cut sites <5 years old, second-growth sites 70–80 years old, and old-growth sites> 120 years old. Salamander abundance on 21, 144-m² plots was determined by area- and time-constrained searches. We also compared age-class habitat characteristics, including downed woody debris, canopy cover, ground area cover, herbaceous vegetation, and woody vegetation. Salamander density was lowest in newly regenerated forests and highest in forests> 120 years old. Comparisons of recently regenerated forests with mature forests> 70 years old indicated that terrestrial salamanders were reduced to very low numbers when mature forests had been intensively harvested. This reduction may result from a decrease in microhabitat availability. Forest age-class comparisons further indicated that salamander abundance slowly increased over time after forests had regenerated. Management decisions that take into account plethodontid salamander abundance and their response to forest structural diversity are important components in sustaining ecosystem integrity while maximizing economic yield.     

Materials,fuels, upgrading,economy, and life cycle assessment of the pyrolysis of algal and lignocellulosic biomass: a review

Climate change issues are calling for advanced methods to produce materials and fuels in a carbon–neutral and circular way. For instance, biomass pyrolysis has been intensely investigated during the last years. Here we review the pyrolysis of algal and lignocellulosic biomass with focus on pyrolysis products and mechanisms, oil upgrading, combining pyrolysis and anaerobic digestion, economy, and life cycle assessment. Products include oil, gas, and biochar. Upgrading techniques comprise hot vapor filtration, solvent addition, emulsification, esterification and transesterification, hydrotreatment, steam reforming, and the use of supercritical fluids. We examined the economic viability in terms of profitability, internal rate of return, return on investment, carbon removal service, product pricing, and net present value. We also reviewed 20 recent studies of life cycle assessment. We found that the pyrolysis method highly influenced product yield, ranging from 9.07 to 40.59% for oil, from 10.1 to 41.25% for biochar, and from 11.93 to 28.16% for syngas. Feedstock type, pyrolytic temperature, heating rate, and reaction retention time were the main factors controlling the distribution of pyrolysis products. Pyrolysis mechanisms include bond breaking, cracking, polymerization and re-polymerization, and fragmentation. Biochar from residual forestry could sequester 2.74 tons of carbon dioxide equivalent per ton biochar when applied to the soil and has thus the potential to remove 0.2–2.75 gigatons of atmospheric carbon dioxide annually. The generation of biochar and bio-oil from the pyrolysis process is estimated to be economically feasible.

     

Coupled electrochemical methods for nitrogen and phosphorus recovery from wastewater: a review

Environmental Chemistry Letters - Declining mineral resources, high fertilizer production cost and widespread eutrophication are calling for the recovery of nitrogen and phosphorus from wastewaters...     

Sulfonated graphene nanomaterials for membrane antifouling,pollutant removal,and production of chemicals from biomass: a review

Water pollution and the unsustainable use of fossil fuel derivatives require advanced catalytic methods to clean waters and to produce fine chemicals from modern biomass. Classical homogeneous catalysts such as sulfuric, phosphoric, and hydrochloric acid are highly corrosive and non-recyclable, whereas heterogeneous catalysts appear promising for lignocellulosic waste depolymerization, pollutant degradation, and membrane antifouling. Here, we review the use of sulfonated graphene and sulfonated graphene oxide nanomaterials for improving membranes, pollutant adsorption and degradation, depolymerization of lignocellulosic waste, liquefaction of biomass, and production of fine chemicals. We also discuss the economy of oil production from biomass. Sulfonated graphene and sulfonated graphene oxide display an unusual large theoretical specific surface area of 2630 m²/g, allowing the reactants to easily enter the internal surface of graphene nanosheets and to reach active acid sites. Sulfonated graphene oxide is hydrophobic and has hydrophilic groups, such as hydroxyl, carboxyl, and epoxy, thus creating cavities on the graphene nanosheet’s surface. The adsorption capacity approached 2.3–2.4 mmol per gram for naphthalene and 1-naphthol. Concerning membranes, we observe an improvement of hydrophilicity, salt rejection, water flux, antifouling properties, and pollutant removal. The nanomaterials can be reused several times without losing catalytic activity due to the high stability originating from the stable carbon–sulfur bond between graphene and the sulfonic group.