Assessing national livestock populations for the production of methane emission inventories

In an effort to accurately assess national methane (CH₄) production levels, many African countries are producing inventories of their national livestock populations. Conducting accurate livestock surveys is an expensive and time-consuming process, but is necessary because the most readily available data on livestock production are often incomplete or unsatisfactory. This paper looks at practical approaches to collecting data on livestock production and on the reproductive parameters for livestock, with special reference to African pastoralist populations, and makes qualified recommendations as to how inventory teams might be able to produce more accurate assessments of their total livestock populations. The methodology used during Nigeria's National Livestock Census (1990–92) serves as a basis for a discussion of the issues.     

Accelerated fractionation of heavy metals in contaminated soils and sediments using rotating coiled columns

A new approach to performing an accelerated sequential extraction of trace elements from solid samples has been proposed. It has been shown that rotating coiled columns (RCC) earlier used in counter-current chromatography can be successfully applied to the dynamic leaching of heavy metals from soils and sediments. A solid sample was retained in the rotating column as the stationary phase under the action of centrifugal forces while different eluents (aqueous solutions of complexing reagents, mineral salts and acids) were continuously pumped through. The procedure developed is time saving and requires only 4-5 h instead of the several days needed for traditional sequential extraction (TSE), complete automation being possible. Losses of solid sample are minimal. In most cases the recoveries of readily bioavailable and leachable forms of Pb, Zn, and Cd are higher, if a dynamic extraction in RCC is used. Since naturally occurring processes are always dynamic, continuous extraction in RCC may help to estimate the contents of leachable forms and their potential risk for the environment more correctly than batch TSE. The Kersten-Foerstner and McLaren-Crawford leaching schemes have been compared, the former has been found to be preferable.     

Molecular approaches to microbiological monitoring: fecal source detection

Molecular methods are useful both to monitor natural communities of bacteria, and to track specific bacterial markers in complex environments. Length-heterogeneity polymerase chain reaction (LH-PCR) and terminal restriction fragment length polymorphism (T-RFLP) of 16S rDNAs discriminate among 16S rRNA genes based on length polymorphisms of their PCR products. With these methods, we developed an alternative indicator that distinguishes the source of fecal pollution in water. We amplify 16S rRNA gene fragments from the fecal anaerobic genus Bacteroides with specific primers. Because Bacteroides normally resides in gut habitats, its presence in water indicates fecal pollution. Molecular detection circumvents the complexities of growing anaerobic bacteria. We identified Bacteroides LH-PCR and T-RFLP ribosomal DNA markers unique to either ruminant or human feces. The same unique fecal markers were recovered from polluted natural waters. We cloned and sequenced the unique markers; marker sequences were used to design specific PCR primers that reliably distinguish human from ruminant sources of fecal contamination. Primers for more species are under development. This approach is more sensitive than fecal coliform assays, is comparable in complexity to standard food safety and public health diagnostic tests, and lends itself to automation and high-throughput. Thus molecular genetic markers for fecal anaerobic bacteria hold promise for monitoring bacterial pollution and water quality.     

Geostatistical analysis as applied to two environmental radiometric time series

This article details the results of an investigation into the application of geostatistical data analysis to two environmentalradiometric time series. The data series employed consist of ⁹⁹Tc values for seaweed (Fucus vesiculosus) and seawater samples taken as part of a marine monitoring program conducted on the coast of northern Norway by the Norwegian Radiation Protection Authority. Geostatistical methods were selected in order to provide information on values of the variables at unsampled times and to investigate the temporalcorrelation exhibited by the data sets. This information is ofuse in the optimisation of future sampling schemes and for providing information on the temporal behaviour of the variablesin question that may not be obtained during a cursory analysis.The results indicate a high degree of temporal correlation withinthe data sets, the correlation for the seawater and seaweed databeing modelled with an exponential and linear function,respectively. The semi-variogram for the seawater data indicatesa temporal range of correlation of approximately 395 days with noapparent random component to the overall variance structure and was described best by an exponential function. The temporal structure of the seaweed data was best modelled by a linear function with a small nugget component. Evidence of drift was present in both semi-variograms. Interpolation of the data setsusing the fitted models and a simple kriging procedure were compared, using a cross-validation procedure, with simple linearinterpolation. Results of this exercise indicate that, for theseawater data, the kriging procedure outperformed the simpleinterpolation with respect to error distribution andcorrelation of estimates with actual values. Using theunbounded linear model with the seaweed data produced estimatesthat were only marginally better than those produced by thesimple interpolation.     

Copper, Copper Mining Effluents and Grazing as Potential Determinants of Algal Abundance and Diversity in Northern Chile

We experimentally tested threealternative hypotheses to explain the low algaldiversity and abundance in an intertidal zonereceiving the effluents of the copper mine El Salvadorin northern Chile. Our results demonstrated thatalgae were able to grow at the levels of dissolvedcopper detected in coastal waters of the area. Duringthe assays, growth and regeneration in several red,green and brown adult algae and juvenile Lessonia nigrescens were normal at copper levels of150 g L^-1 or, in some cases, higher. Wealso found that the coastal sea water mixed with theeffluent was not lethal to algae, although in somecases minor effects on growth were detected. Theseresults indicate that today's low algal diversity andabundance can not be explained by the current copperlevels in the area nor by the effect of the effluent.Exclusion of grazers, however, resulted in a fastcolonization by various algal species. This, togetherwith atypically high grazer density at the areas underthe influence of the effluent, strongly suggests thatherbivory, a factor not directly related to the miningoperation, is likely to be responsible for the lowalgal diversity and abundance in the studied locality.     

A comparison of Lowry,Bradford and Smith protein assays using different protein standards and protein isolated from the marine diatom Thalassiosira pseudonana

Two spectrophotometric assays for protein commonly used in marine research (Coomassie stain, Bradford; alkaline copper, Lowry) and a more recent assay which has not been applied in this field (bicinchoninic acid, Smith) were compared for homogenates of the marine diatom Thalassiosira pseudonona using bovine serum albumin (BSA) as a standard. When homogenates were prepared by precipitating protein with trichloroacetic acid (TCA) and redissolving in 1 N NaOH, the protein content estimated by the Lowry and Smith assays agreed closely, but was consistently 20% higher than that indicated by the Bradford assay. To determine if this difference was due to the choice of a protein standard, protein from T. pseudonana was purified and compared to BSA, bovine gamma-globulin (BGG), and casein. The reactivity of the purified protein (expressed as the slope of the absorbance vs protein concentration curve) did not differ between cultures grown at high or low irradiance. For the Smith and Bradford assays the reactivity of BSA was not significantly different from algal protein, but for the Lowry assay, algal protein was significantly higher in reactivity than BSA. BGG was not significantly different in reactivity from algal protein for the Lowry and Smith assays, but BGG gave significantly lower absorbances than algal protein in the Bradford assay. These results suggest that BSA is a suitable standard for algal protein in the Bradford assays, while BGG is preferable for the Lowry assay. Either protein standard could be used for the Smith assay. Differences in purified algal protein reactivity compared to BSA could not account for the differences among the assays, nor could interference by chlorophyll a. Precipitating protein with TCA prior to analyses gave lower protein than direct analyses of homogenates for the Lowry and Smith assays, but no differences were found for the Bradford assay. As a result, the Lowry and Smith assays indicated up to 60% greater protein than the Bradford if TCA precipitation was not performed. This may be due to removal of free amino acids and small peptides which are less reactive in the Bradford assay. The 20% higher protein found in the Lowry or Smith vs Bradford assays may be due to different assay sensitivity to small peptides or other compounds which are precipitated along with proteins by TCA. Although the Smith assay is substantially simpler to perform than the Lowry, there appear to be no quantitative differences in the results. It remains unclear which spectrophotometric assay is most accurate, but the Bradford assay is faster and simpler, and is less likely to be affected by non-protein compounds found in marine phytoplankton.     

西印度洋地区海草生态系统

海草是海洋被子植物,广泛分布在温带和热带的海岸带水域,是地球上水生生态系统中最具生产力的生物之一.     

Liquid crystallinity of levan/water/starch solutions

Transmitted light measurements performed with a UV-visible spectrophotometer were used to characterize how starch affects the position of boundaries on the phase diagram for dilute aqueous solutions of levan (a branched polymer of fructose). Data were collected in the range 15 to 70°C; the minimum concentrations required for separation of a nematic phase and the minimum concentration required for a fully nematic solution were identified within this range. While hard interactions (repulsion between rod-like molecular segments) dictate the formation of a liquid crystalline phase at and above ambient temperature in the absence of starch, soft interactions become more significant as solutions are cooled toward ambient when starch is present. Small amounts of starch might be used as a filler to modify the mechanical properties (while retaining the process-related benefits) of levan films cast from liquid crystalline solution.     

Faunal loss from bushmeat hunting: empirical evidence and policy implications in Bioko Island

Bushmeat market data can be used to detect hunting sustainability by using proxies such as decline in sale volume and price increases over time. Here, we explore these proxies for the Malabo market in Bioko Island, Equatorial Guinea, the main bushmeat sale centre for the island. We gathered data during two sample phases (we call these ‘early’ and ‘later’) between March 1996 and October 1998, to test for evidence of faunal depletion during that period. Mammals (ungulates, rodents and primates) made up most of the bushmeat sold. Our analyses confirmed significant and sudden, rather than continuous, declines between phases, in total and individual animal group carcass volumes. Market species composition differed between phases; diversity indices and evenness increased in the later phase of the study. Price was related to species body mass and carcass condition (whether the carcass was smoked or fresh). Most species prices were higher in the later phase of the study. A total of 33 sites contributed bushmeat to the market, with over half of the recorded volume emerging from five sites in the south of the island. Bushmeat volume supplied from different regions of the island varied significantly between phases, and fewer sites contributed animals to the market during the later phase of the study. Proportionately more primates, ungulates but fewer rodents, appeared in the southern samples, compared with the northern. We suggest that in just over 2 years, hunting incursions, especially into the south of the island, may have resulted in drastic faunal losses. Subsequent data, collected by other authors, also indicate that the hunting spurt in the mid- and late-1990s may have irreversibly imperilled the island's mammalian fauna, since numbers of these animals entering the market have not increased since our study period. Although the Equato-Guinean authorities have recently initiated mechanisms to better protect the country's wildlife, through various legal and funding instruments, we suggest that these initiatives are likely to fail, if the social and environmental linkages are not fully understood to guide immediate restoration of such a unique African faunal assemblage.