Using Aerial Video to Train the Supervised Classification of Landsat Tm Imagery for Coral Reef Habitats Mapping

Management of coral reef resources is a challenging task, in many cases, because of the scarcity or inexistence of accurate sources of information and maps. Remote sensing is a not intrusive, but powerful tool, which has been successfully used for the assessment and mapping of natural resources in coral reef areas. In this study we utilized GIS to combine Landsat TM imagery, aerial photography, aerial video and a digital bathymetric model, to assess and to map submerged habitats for Alacranes reef, Yucatán, México. Our main goal was testing the potential of aerial video as the source of data to produce training areas for the supervised classification of Landsat TM imagery. Submerged habitats were ecologically characterized by using a hierarchical classification of field data. Habitats were identified on an overlaid image, consisting of the three types of remote sensing products and the bathymetric model. Pixels representing those habitats were selected as training areas by using GIS tools. Training areas were used to classify the Landsat TM bands 1, 2 and 3 and the bathymetric model by using a maximum likelihood algorithm. The resulting thematic map was compared against field data classification to improve habitats definition. Contextual editing and reclassification were used to obtain the final thematic map with an overall accuracy of 77%. Analysis of aerial video by a specialist in coral reef ecology was found to be a suitable source of information to produce training areas for the supervised classification of Landsat TM imagery in coral reefs at a coarse scale.     

Delayed recovery of giant kelp near its southern range limit in the North Pacific following El Niño

The northern distribution limit of giant kelp, Macrocystis pyrifera (Agardh), along the Pacific coast of North America is relatively stable near Point Año Nuevo, California, but its southern limit has varied over hundreds of kilometers along the Baja California peninsula during the past 20 years. The factors that drive this variability in the southern limit were examined by: (1) quantifying the abundances of M. pyrifera and the subsurface stipitate kelp, Eisenia arborea (Areschoug), near M. pyriferas then southern limit at Punta San Roque (27°15N; 114°42W) on ten occasions between August 1997 and June 2002 (prior to and following the 1997/1998 El Niño Southern Oscillation); (2) initiating a field manipulation at Punta San Roque in June 2000 to examine competition between these two kelp species; and (3) surveying 20 additional sites near Punta San Hipólito (27°01N; 114°00W) in June 2002 to determine whether M. pyrifera populations had recovered to their pre-1982/1983 El Niño southern range limit after ~20 years of absence. These observations and the experimental results suggest that M. pyrifera is removed from its southern limit by the high temperatures and large waves associated with El Niños, while E. arborea is able to survive and recruit in high densities and thereby delay or even prevent M. pyriferas recovery. An inverse relationship was observed between these two species over the 5-year study. The field experiment showed that at both 4 months and 1 year after areas occupied by E. arborea were cleared, substantial recruitment of M. pyrifera occurred, while recruitment was negligible in uncleared areas. This study suggests that the southern range limit of M. pyrifera is determined by increased mortality and recruitment failure following the warm temperatures and low nutrient conditions associated with El Niños, limited substrate availability, and by competition with the more persistent populations of E. arborea.Communicated by J.P. Grassle, New Brunswick     

Reproductive cycle of two commercial species of sea cucumber (Echinodermata: Holothuroidea) from Caribbean Panama

The reproductive status of the holothuroid species Isostichopus badionotus (Selenka, 1867) and Holothuria mexicana (Ludwig, 1875) was studied over 16 months in Bocas del Toro (Panama), from November 1999 to February 2001. Sexual reproduction was evaluated by the gonad index method, and by histology of gonad development. In addition, population structure was assessed based on sex ratio, minimum reproductive size, and length and weight distributions of males and females. The sex ratio in both species was 1:1, with a unimodal population distribution composed mainly of mature individuals. The minimum reproductive length and weight were 13-20 cm and 150 g, respectively, for both species, although reproductive individuals 10 cm in length were also found. A consistently higher gonad index was observed in H. mexicana, due to a high proportion of mature females and males and high gonad indices in most monthly samples. Gametogenesis and spawning patterns seemed to occur throughout the year, with periods of enhanced activity. Two periods of maximum reproductive activity were tentatively identified: July-November for I. badionotus and February-July for H. mexicana, but neither species had a single, sharply defined annual spawning event. Further work on these exploited holothuroids should examine the relationships between reproduction and environmental factors and between reproductive status and recruitment.     

Heavy metals and organic carbon in sediments from the Tuy River basin,Venezuela

The Tuy River basin, located in north-central Venezuela with an annual average temperature of 27°C and precipitation of 140 cm, was selected to conduct a geochemical study of bottom sediments, with the object of establishing the natural and human influences in the abundance and distribution of Fe, Mn, Cr, Co, Cu, Ni, Pb, Zn and organic carbon. The basin is lithologically divided into two sub-basins, north and south. The north sub-basin drains a iow-grade metasedimentary terrain with a population density of 800 persons km^–2 and approximateiy 600 industrial sites, while the south sub-basin in underlain by metavolcanic and ultramafic rocks, with a population density of less than 10 persons km^–2.Stream bottom sediment samples (150) were collected during the years of 1979–1986 in 16 unpolluted sites and 13 polluted sites. The sediments were air dried at room temperature and sieved through a 120 stainless steel mesh (125 m). Samples of grain size smaller than 125 m were analysed, the heavy metals being determined by atomic absorption spectrometry and the organic carbon (Corg) by dry combustion.The higher concentrations of heavy metals and organic carbon found in the pristine areas were in the south sub-basin, especially in those areas with higher annual precipitation and tropical forest. This indicated that the metavolcanic and ultramafic rocks yield higher concentrations of heavy metals than the metasedimentary rocks. It was also noted that the higher concentrations of Cr and Ni are associated with the ultramafic rocks. The results obtained from the sediment samples collected in the polluted sites showed that the elements Pb, Zn and Corg are enriched up to 4 times as a result of ail the human activities taking place in the basin. Organic carbon is an excellent indicator of domestic wastewater, Pb and Zn are good indicators of the automotive traffic and industrial effluents. The concentrations of each heavy metal did not show any significant correlation with grain size fractions; however, the concentration of organic carbon did show a negative correlation with grain size. The lithological, climatic and vegetation influence in the abundance of heavy metals and organic carbon in stream sediments clearly indicates the necessity of establishing background levels for the area under study when carrying out studies in environmental geochemistry.     

Accumulation of mesozooplankton in a wake area as a causative mechanism of the “island-mass effect”

Mesozooplankton biomass (as displacement volume and protein content) and electron-transport system (ETS) activity have been studied in the coastal waters around the Canary Islands. Increases in biomass and ETS activity, on a unit volume basis, were observed in the wakes of the islands. The biomass values obtained in the leeward area for Gran Canaria Island were up to ten times higher than those observed for typical oceanic waters around this archipelago. Sampling was performed in May 1986 at the end of the characteristic vertical mixing period in these waters. Relatively strong winds were recorded prior to sampling. Specific ETS activity was higher at the windward stations on the island shelf. This correlates with the observation in a recent study of increased primary production on the shelf area, where turbulence produced by the northerly trade winds has a marked effect. The persistence of this turbulence during a prolonged wind-pulse results in an accumulation of organisms in the wake of the islands due to current dynamics. This process is proposed as being an important causative mechanism of the island-mass effect. Different biomass values were recorded between circular and oblong islands. The latter are oriented towards the current and the northerly trade winds, and display significantly lower biomass values than the former.     

Lévy walk patterns in the foraging movements of spider monkeys (<Emphasis Type="Italic">Ateles geoffroyi</Emphasis>)

Scale invariant patterns have been found in different biological systems, in many cases resembling what physicists have found in other, nonbiological systems. Here we describe the foraging patterns of free-ranging spider monkeys (Ateles geoffroyi) in the forest of the Yucatan Peninsula, Mexico and find that these patterns closely resemble what physicists know as Lévy walks. First, the length of a trajectorys constituent steps, or continuous moves in the same direction, is best described by a power-law distribution in which the frequency of ever larger steps decreases as a negative power function of their length. The rate of this decrease is very close to that predicted by a previous analytical Lévy walk model to be an optimal strategy to search for scarce resources distributed at random. Second, the frequency distribution of the duration of stops or waiting times also approximates to a power-law function. Finally, the mean square displacement during the monkeys first foraging trip increases more rapidly than would be expected from a random walk with constant step length, but within the range predicted for Lévy walks. In view of these results, we analyze the different exponents characterizing the trajectories described by females and males, and by monkeys on their own and when part of a subgroup. We discuss the origin of these patterns and their implications for the foraging ecology of spider monkeys.Communicated by D. Watts     

Environmental and genetic influences on mating strategies along a replicated food availability gradient in guppies (Poecilia reticulata)

Food availability is expected to influence the relative cost of different mating tactics, but little attention has been paid to this potential source of adaptive geographic variation in behavior. Associations between the frequency of different mating tactics and resource availability could arise because tactic use responds directly to food intake (phenotypic plasticity), because populations exposed to different average levels of food availability have diverged genetically in tactic use, or both. Different populations of guppies (Poecilia reticulata) in Trinidad experience different average levels of food availability. We combined field observations with laboratory “common garden” and diet experiments to examine how this environmental gradient has influenced the evolution of male mating tactics. Three independent components of variation in male behavior were found in the field: courtship versus foraging, dominance interactions, and interference competition versus searching for mates. Compared with low-food-availability sites, males at high-food-availability sites devoted more effort to interference competition. This difference disappeared in the common garden experiment, which suggests that it was caused by phenotypic plasticity and not genetic divergence. In the diet experiment, interference competition was more frequent and intense among males raised on the greater of two food levels, but this was only true for fish descended from sites with low food availability. Thus, the association between interference competition and food availability in the field can be attributed to a genetically variable norm of reaction. Genetically variable norms of reaction with respect to food intake were found for the other two behavioral components as well and are discussed in relation to the patterns observed in the field. Our results indicate that food availability gradients are an important, albeit complex, source of geographic variation in male mating strategies.     

Ozone exposure among Mexico City outdoor workers

In researching health effects of air pollution, pollutant levels from fixed-site monitors are commonly assigned to the subjects. However, these concentrations may not reflect the exposure these individuals actually experience. A previous study of ozone (O3) exposure and lung function among shoe-cleaners working in central Mexico City used fixed-site measurements from a monitoring station near the outdoor work sites as surrogates for personal exposure. The present study assesses the degree to which these estimates represented individual exposures. In 1996, personal O3 exposures of 39 shoe-cleaners working outdoors were measured using an active integrated personal sampler. Using mixed models, we assessed the relationship between measured personal O3 exposure and ambient O3 measurements from the fixed-site monitoring station. Ambient concentrations were approximately 50 parts per billion higher, on average, than personal exposures. The association between personal and ambient O3 was highly significant (mixed model slope p < 0.0001). The personal/ambient ratio was not constant, so use of the outdoor monitor would not be appropriate to rank O3 exposure and evaluate health effects between workers. However, the strong within-worker longitudinal association validates previous findings associating day-to-day changes in fixed-site O3 levels with adverse health effects among these shoe-cleaners and suggests fixed-site O3 monitors may adequately estimate exposure for other repeated-measure health studies of outdoor workers.     

Antifungal and anti-aflatoxigenic activity of Heliopsis longipes roots and affinin/spilanthol against Aspergillus parasiticus by downregulating the expression of alfD and aflR genes of the aflatoxins biosynthetic pathway

Abstract

In the present study, ethanolic extract from Heliopsis longipes roots and affinin/spilanthol against Aspergillus parasiticus growth and aflatoxins production were studied in relation to the expression of aflD and aflR, two key genes of aflatoxins biosynthetic pathway. Phytochemical analysis of the ethanolic extract by GC-EIMS identified affinin/spilanthol (7.84?±?0.27?mg g^?1) as the most abundant compounds in H. longipes roots. The antifungal and anti-aflatoxigenic assays showed that affinin/spilanthol at 300?µg mL^?1 produced the higher inhibition of radial growth (95%), as well as, the higher aflatoxins production inhibition (61%) in comparison to H. longipes roots (87% and 48%, respectively). qRT-PCR revealed that the expression of aflD and aflR genes showed a higher downregulation in affinin/spilanthol at 300?µg mL^?1. The expression ratio of alfD was suppressed by affinin/spilanthol in 79% and aflR in 84%, while, a lower expression ratio suppressed by H. longipes was obtained, alfD (55%) and aflR (59%). Affinin/spilanthol possesses higher antifungal and anti-aflatoxigenic activity against A. parasiticus rather than H. longipes roots, and this anti-aflaxotigenic activity occurring via downregulation of the aflD and aflR genes. Thus, H. longipes roots and affinin/spilanthol can be considered potent antifungal agents against aflatoxigenic fungus, especially, affinin/spilanthol.     

Content of aliphatic hydrocarbons in limpets as a new way for classification of species using artificial neural networks

It is demonstrated that biological species like limpets can be classified according to their level of n-alkanes when artificial neural networks are applied. Marine intertidal and subtidal limpets of the Canary Islands (Spain), Patella piperata, Patella candei crenata and Patella ulyssiponensis aspera were selected as bioindicator organisms. Samples were collected at four stations on the coasts of Fuerteventura. Concentration of n-alkanes in the soft tissues of the limpets has been determined by gas chromatography. Data were treated with artificial neural networks (ANNs) and it was found that using suitable architecture of a supervised artificial neural network, the limpets can be successfully distinguished (classified) up to 98%.