Research progress in microbial cytochrome P450 and xenobiotic metabolism北大核心CSCD

Cytochrome P450 (CYP450s) is a type of heme-mercaptide protein superfamily, which is distributed widely in animals, plants, and microorganisms. CYP450s can oxidize and degrade many exogenous compounds such as drugs, herbicides, pesticides, some persistent organic pollutants, and so on. Based on recent researches, this paper reviews the nomenclature, classification, structure, and catalytic mechanism of P450 enzymes, and summarizes the research progresses in the metabolism and biodegradation of xenobiotics using P450 enzymes from microorganisms. The nomenclature and classification of the P450 gene superfamily mainly rely on the similarities of amino acid sequences. Although the structures of P450 are conserved, their recognition sites towards to the substrates are variable. This is also the structural basis for the catalytic diversities of P450 enzymes. Few P450 enzymes from bacteria and fungi can metabolize and degrade xenobiotics such as polycyclic aromatic hydrocarbons, herbicides, and so on. However, these P450 enzymes are less likely be used in practical applications because of their low catalytic activities. In the future, more P450 enzymes with high degradable efficiencies towards xenobiotics are needed to be obtained using multiple omics tools or modifying the existing P450 enzymes, to achieve the bioremediation of the environment. © 2018 Science Press. All rights reserved.     

Part I : <Emphasis Type="Italic">a priori</Emphasis> study of erosion and deposition with large eddy simulation of turbulent flow over multiple 2D sandy Gaussian hills

The micro-scale prediction of sand trapping or take-off over hilly terrains is a crucial issue in semi-arid regions for soil depletion. In this context, large eddy simulations around one or several hills are performed in order to provide statistical parameters to characterize the flow at micro-scales and provide data for mesoscale modelling. We focus on the determination of recirculation zones since they play an important role in solid particle erosion or entrapment. A new wall modeling adapted from Huang et al. (J Turbul 17:1–24, 2016) for rough boundary layers is found to improve the prediction of the recirculation zone length downstream of an isolated hill and is used for all the numerical cases presented here. A geometrical parameterization of the recirculation zones is proposed. When the recirculation region is assumed to have an ellipsoidal shape, the total surface of the recirculation can be obtained from this new parameterization and easily extrapolated to more general dune configurations. Numerical results are compared with experiments performed in our laboratory (Simoëns et al. in Procedia IUTAM 17:110–118, 2015) and good agreement is achieved. We explore general aerodynamic cases deduced from the urban canopy scheme of Oke (Energy Build 11:103–113, 1988). In this scheme the momentum and mass exchange between the upper layer and the space between hills is sorted according to the streamwise hill spacing within three basic cases of skimming, wake or isolated flow. The study of the recirculation zones, the mean velocity and Reynolds stress profiles around an isolated or two consecutive hills with different distances shows that the double hill configuration with 3H separation behaves as much as a whole to the upcoming flow. The vortex formed between the crests does not strongly affect the overall evolution of the outer flow. By an a priori prediction of the preferential zones of erosion and accumulation of fictive particles, it is shown that isolated dunes present more deposition and less erosion than two-hill configurations. The results presented in this study will be discussed in the presence of Lagrangian transport of sand particles above 2D Gaussian hills in future work.     

Rapid dephosphorylation of glyphosate by Cu-catalyzed sulfite oxidation involving sulfate and hydroxyl radicals

Environmental Chemistry Letters - Glyphosate is a broad-spectrum toxic herbicide that has entered the environment. Advanced oxidation processes efficiently remove various persistent organic...     

稻米来源镉对生长期猪的生长特性及不同脏器组织镉蓄积的影响

环境中的镉污染对动植物及人类都带来了极大的危害。目前,多数镉毒理研究关注其无机状态,而来源于稻米的有机态镉的毒害作用报道较少。为评估稻米来源镉对生长期猪的毒性作用,选用初始体重为30 kg左右的健康生长猪28头,随机分为体重无明显差异的2组,即对照组与稻米来源镉组(试验组),研究稻米来源镉对生长期猪(生长及育肥全阶段)的生长特性及不同脏器组织镉蓄积的影响。结果表明,在生长及育肥阶段,试验组与对照组相比:1)生长特性无显著差异(P0.05);2)育肥期组织游离氨基酸含量,除肌肉中的赖氨酸显著降低外(P0.05),血浆、肝脏、肾脏及肌肉中其他游离氨基酸水平均无显著差异(P0.05);3)心脏、肝脏、脾脏、肾脏、肺脏、胃、小肠、大肠、骨骼中镉蓄积量显著增高(P0.05),而肌肉、血液中无显著差异(P0.05),脂肪、皮中未检出镉。日粮使用大比例镉超标稻米后镉在各脏器和组织中的蓄积规律为肾脏肝脏小肠脾肺大肠胃血液骨头心腿肌背肌脂肪、皮。由此可见,镉超标稻米对生长期猪的生长特性未产生显著的影响,稻米来源镉主要蓄积于肝脏和肾脏,而主流食用组织肌肉和血液中镉的蓄积量较少。     

洱海流域湖泊湖滨带福寿螺时空分布

福寿螺是世界100种恶性入侵物种中唯一的水生螺,已对大理及周边地区造成了不可估量的经济损失和生态安全问题。为探究洱海流域湖泊湖滨带福寿螺时空分布及与水环境因子、季节之间的关系,探索福寿螺在大理地区的入侵机制,为大理地区高效防治福寿螺提供建设性建议,并为福寿螺时空分布格局的相关研究积累资料,于2016年冬季和2017年夏季在大理洱海及其上游水源地海西海、西湖、茈碧湖、绿玉池,以及罗时江湿地进行系统抽样,利用统计软件分析福寿螺分布与水质关系,结合GIS,分析福寿螺的时空分布以及潜在入侵危害。结果表明,从空间尺度上,洱海流域福寿螺有进一步扩散的趋势;从时间尺度上,福寿螺的密度随季节性水位的改变而变化;洱海流域的福寿螺分布和水质因子之间基本无相关性。     

基于多时相遥感数据的典型区生态格局变化分析

利用1985、2000、2013年遥感影像提取的土地覆盖数据,通过景观格局指数、动态度计算、转移矩阵等,分析1985—2013年我国典型地区各类型生态系统景观格局及其动态变化特征、生态系统相互转化时空变化特征等,揭示1985—2013年生态环境格局变化的特点和规律:一级分类生态系统综合变化率,赣江、闽江、白龙江和岷江上游流域分别为4.7%、3.9%、3.3%和1.7%,生态系统变化强度1985—2000年较缓,2000—2013年更剧烈。1985—2013年典型区生态系统的主要转化方向具有持续性和双向性特征,岷江、白龙江和赣江上游流域退耕还林还草政策效果明显,出现较高比例的耕地转为森林和草地;面积占67.4%生态系统类型变化与耕地生态系统和人工表面生态系统变化有关;生态系统变化具有明显的区域差异,生态变化主要表现为沿主要河流谷地的线状延伸,主要城镇居民点附近生态系统类型变化较为突出,人类活动是典型地区生态系统类型格局变化的主要驱动力;典型区尤其是敏感区应加大退耕还林还草政策,减少人类经济活动,降低洪水泥石流灾害发生的概率和程度。     

基于YanMeng台风风场的输电线路极值风速推算方法

极值风速作为输电线路抗风设计的重要参数,对结构的强度和年限标准意义重大。为克服采用观测资料直接推算极值风速的缺陷,给出了一种沿海地区输电线路极值风速推算的数值方法,即以台风风场物理方程为基础,利用历史台风进行反演,验证风场模型的适应性,随后结合台风年鉴,采用模拟圆和Monte Carlo抽样模拟进行研究点最大风速序列计算,并根据极值III型Weibull分布进行极值风速的推算。最后以海口市为例,对该极值风速推算方法进行详细阐述,推算了海口市近100a内重现期的极值风速,并与观测统计值进行对比,研究发现本文模拟效果较好,可以作为沿海地区输电线路抗风设计的理论参照。     

格栅加筋废弃钢渣的强度特性试验研究

提出了格栅加筋废弃钢渣的土工回填新技术,通过三轴固结排水试验研究格栅加筋废弃钢渣的抗剪强度特性。以玄武岩纤维格栅和江苏永钢废弃钢渣为例,分析在不同相对密实度、格栅加筋层数和围压下的格栅加筋废弃钢渣的应力应变特性,将格栅加筋废弃钢渣的抗剪强度特性与传统土、特殊土的抗剪强度特性以及前人研究的格栅或格室加筋特殊土的抗剪强度特性进行了比较。结果表明:各工况下的格栅加筋钢渣的黏聚力强度都远大于传统土类,且内摩擦强度也较高,达到砂类的摩擦强度;各工况下的格栅加筋钢渣的黏聚力强度弱于黄土与膨胀土,但其内摩擦强度则高于膨胀土与黄土。表明格栅加筋钢渣在较多工况下比传统土、特殊土以及格栅或格室加筋特殊土拥有更高的抗剪强度特性,可替换砂土应用于软基处理或加筋回填工程中。     

硫氧同位素解析典型岩溶地下河流域硫酸盐季节变化特征和来源

全球约1/4的饮用水源为岩溶水,但岩溶含水层极易遭受人类活动污染.以八步地下河为例,利用硫酸盐（SO₄^2-）浓度、硫氧同位素（δ³⁴S-SO₄和δ¹⁸O-SO₄）和水中氧同位素（δ¹⁸O-H₂O）研究岩溶小流域SO₄^2-的丰、枯水期两个季节变化特征和来源.结果表明：①受酸性矿坑水（acid mine drainage,AMD）直接影响的采样点SO₄^2-浓度较高（≥250 mg·L^-1）,枯水期>丰水期,其他采样点浓度季节变化相对较弱且浓度低.②地表水丰水期δ³⁴S-SO₄与δ¹⁸O-SO₄平均值分别为-10.5‰和4.7‰,枯水期为-11.5‰和1.3‰;地下水丰水期δ³⁴S-SO₄与δ¹⁸O-SO₄平均值分别为-2.9‰和7.1‰,枯水期为-3.2‰和6.2‰.地表水和地下水中δ³⁴S-SO₄与δ¹⁸O-SO₄值都存在丰水期偏重、枯水期偏轻的特征.③丰、枯水期流域内地表水和地下水中各采样点δ³⁴S-SO₄值变化不明显,表明在特定的采样点SO₄^2-的来源相对稳定.④地表水和地下水中SO₄^2-主要来源于雨水、硫化物和石膏,地下河出口各来源丰水期所占的比例分别为13%、40%和47%,枯水期为18%、39%和43%.     

真菌生物滤池净化苯乙烯废气的研究

采用接种Aspergillus candidus和Penicillium frequentans的真菌生物滤池处理苯乙烯废气,考察苯乙烯在生物滤池中的净化效果和物质转化特性。苯乙烯的进气质量浓度为200～800 mg/m3,气体流量分别为0.28,0.38和0.48 m3/h,对应的气体停留时间分别为60,45和35 s。试验结果表明:苯乙烯在真菌生物滤池中有较好的处理效果,最大去除能力达66.78 g/(m3.h),真菌生物滤池中二氧化碳的产生量和苯乙烯去除量呈线性关系。微生物分析结果表明,接种的Aspergillus candidus和Penicillium frequentans在反应器内能够长期保持优势地位。