The scope and severity of white-nose syndrome on hibernating bats in North America

Assessing the scope and severity of threats is necessary for evaluating impacts on populations to inform conservation planning. Quantitative threat assessment often requires monitoring programs that provide reliable data over relevant spatial and temporal scales, yet such programs can be difficult to justify until there is an apparent stressor. Leveraging efforts of wildlife management agencies to record winter counts of hibernating bats, we collated data for 5 species from over 200 sites across 27 U.S. states and 2 Canadian provinces from 1995 to 2018 to determine the impact of white-nose syndrome (WNS), a deadly disease of hibernating bats. We estimated declines of winter counts of bat colonies at sites where the invasive fungus that causes WNS (Pseudogymnoascus destructans) had been detected to assess the threat impact of WNS. Three species undergoing species status assessment by the U.S. Fish and Wildlife Service (Myotis septentrionalis, Myotis lucifugus, and Perimyotis subflavus) declined by more than 90%, which warrants classifying the severity of the WNS threat as extreme based on criteria used by NatureServe. The scope of the WNS threat as defined by NatureServe criteria was large (36% of Myotis lucifugus range) to pervasive (79% of Myotis septentrionalis range) for these species. Declines for 2 other species (Myotis sodalis and Eptesicus fuscus) were less severe but still qualified as moderate to serious based on NatureServe criteria. Data-sharing across jurisdictions provided a comprehensive evaluation of scope and severity of the threat of WNS and indicated regional differences that can inform response efforts at international, national, and state or provincial jurisdictions. We assessed the threat impact of an emerging infectious disease by uniting monitoring efforts across jurisdictional boundaries and demonstrated the importance of coordinated monitoring programs, such as the North American Bat Monitoring Program (NABat), for data-driven conservation assessments and planning.     

Coupled changes in oxygen concentration and pH caused by metabolism of benthic coral reef organisms

Benthic marine primary producers affect the chemistry of their surrounding environment through metabolic processes. Photosynthesis and respiration will elevate or depress the concentration of oxygen in the diffusive boundary layer. Likewise, acid–base regulation and biomineralization/dissolution for calcifying species can alter the relative concentration of inorganic carbon species and thus pH. Here, we measured the relative ability of several common benthic primary producers from coral reef systems of the central Pacific and the Caribbean to simultaneously affect seawater oxygen concentration and pH values. Repeated measurements over a diel cycle confirmed that several primary producers substantially alter surrounding seawater chemistry over time. The majority of fleshy algae exhibited a stoichiometric ratio of oxygen to hydrogen ions not significantly different from one during daylight hours. In contrast, calcifiers exhibited significantly lower oxygen to hydrogen ion ratios that were unique for each species and were inversely correlated with known rates of calcification. These data provide the first quantitative estimates of the simultaneous influence of several species of benthic primary producers on water column oxygen concentrations and pH across different tropical reef systems. Finally, because more productive fleshy taxa have the potential to raise both oxygen and pH during the day to a greater extent than calcified species, our results suggest that some fleshy taxa may provide a buffering capacity to future ocean acidification scenarios.     

Experimental and environmental factors affect spurious detection of ecological thresholds

Threshold detection methods are increasingly popular for assessing nonlinear responses to environmental change, but their statistical performance remains poorly understood. We simulated linear change in stream benthic macroinvertebrate communities and evaluated the performance of commonly used threshold detection methods based on model fitting (piecewise quantile regression [PQR]), data partitioning (nonparametric change point analysis [NCPA]), and a hybrid approach (significant zero crossings [SiZer]). We demonstrated that false detection of ecological thresholds (type I errors) and inferences on threshold locations are influenced by sample size, rate of linear change, and frequency of observations across the environmental gradient (i.e., sample-environment distribution, SED). However, the relative importance of these factors varied among statistical methods and between inference types. False detection rates were influenced primarily by user-selected parameters for PQR (tau) and SiZer (bandwidth) and secondarily by sample size (for PQR) and SED (for SiZer). In contrast, the location of reported thresholds was influenced primarily by SED. Bootstrapped confidence intervals for NCPA threshold locations revealed strong correspondence to SED. We conclude that the choice of statistical methods for threshold detection should be matched to experimental and environmental constraints to minimize false detection rates and avoid spurious inferences regarding threshold location.     

Spawning and development in <Emphasis Type="Italic">Osedax</Emphasis> boneworms (Siboglinidae,Annelida)

We report observations on spawning and early development in bone-eating worms of the genus Osedax. Individual females of Osedax rubiplumus were observed at 1820 m depth freely spawning hundreds of oocytes, and females of an undescribed species, Osedax “orange collar”, were observed spawning in laboratory aquaria. Cytological and molecular analysis of the spawned oocytes of two Osedax species revealed no evidence for the bacterial endosymbionts that the female worms require for their nutrition, suggesting that the bacteria must be acquired later from the environment, as they are in other siboglinids. Individual O. “orange collar” females released an average of 335 (±130) eggs per day, but the number of oocytes spawned per day varied greatly, suggesting that not all the females spawned daily. Fertilization rates of the spawned oocytes varied from 0 to 100%, though most females showed nearly 100% fertilization rates. Oocytes spawned in the laboratory at 4–6°C were negatively buoyant. If fertilized, these oocytes extruded polar bodies and then after at least four hours cleaved unequally. Subsequent cleavages occurred in a spiral pattern at roughly 2-h intervals, resulting in free-swimming trochophore larvae after 24 h. These lecithotrophic trochophores swam for 9–16 days before settling with several hooked chaetae, similar to those of dwarf Osedax males. The larval life span of the Osedax species studied in the laboratory appears to be shorter than in closely related Vestimentifera. Osedax rubiplumus, on the other hand, has much larger oocytes and so may have greater dispersal potential than these other Osedax species. The high fecundity and apparently continuous reproduction of Osedax boneworms permits the opportunistic exploitation of sunken vertebrate bones. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Nutrient criteria for lakes,ponds, and reservoirs: A Bayesian TREED model approach

We develop regional-scale eutrophication models for lakes, ponds, and reservoirs to investigate the link between nutrients and chlorophyll-a. The Bayesian TREED (BTREED) model approach allows association of multiple environmental stressors with biological responses, and quantification of uncertainty sources in the empirical water quality model. Nutrient data for lakes, ponds, and reservoirs across the United States were obtained from the Environmental Protection Agency (EPA) National Nutrient Criteria Database. The nutrient data consist of measurements for both stressor variables (such as total nitrogen and total phosphorus), and response variables (such as chlorophyll-a), used in the BTREED model. Markov chain Monte Carlo (McMC) posterior exploration guides a stochastic search through a rich suite of candidate trees toward models that better fit the data. The Bayes factor provides a goodness of fit criterion for comparison of resultant models. We randomly split the data into training and test sets; the training data were used in model estimation, and the test data were used to evaluate out-of-sample predictive performance of the model. An average relative efficiency of 1.02 between the training and test data for the four highest log-likelihood models suggests good out-of-sample predictive performance. Reduced model uncertainty relative to over-parameterized alternative models makes the BTREED models useful for nutrient criteria development, providing the link between nutrient stressors and meaningful eutrophication response.     

Propagule redirection: habitat availability reduces colonization and increases recruitment in reef fishes

Increased habitat availability or quality can alter production of habitat-dependent organisms in two contrasting ways: (1) by enhancing input of new colonists to the new sites (the Field-of-Dreams Hypothesis); and (2) by drawing colonists away from existing sites (the Propagule Redirection Hypothesis), and thus reducing the deleterious effects of density. We conducted a field experiment on coral reef fishes in Moorea, French Polynesia, to quantify how differing levels of habitat availability (controlling for quality) increased and/or redirected colonizing larval fish. Focal reefs without neighboring reefs received two to four times more settlers than reefs with adjacent habitat, demonstrating that increased habitat redirected larval fish. At the scale of the entire reef array, total colonization increased 1.3-fold in response to a sixfold increase in reef area (and a 2.75-fold increase in adjusted habitat availability). Thus, propagules were both increased and redirected, a result midway between the Field-of-Dreams and Propagule Redirection Hypotheses. A recruitment model using our data and field estimates of density-dependent recruitment predicts that habitat addition increases recruitment primarily by ameliorating the negative effects of competition at existing sites rather than increasing colonization at the new sites per se. Understanding long-term implications of these effects depends upon the interplay among habitat dynamics, population connectivity, colonization dynamics, and density dependence.     

Reconstructing the movements of free-ranging demersal fish in the North Sea: a data-matching and simulation method

Demersal fish cannot be readily tracked using data loggers that provide satellite-based or light-based geolocation. Moreover, fish that are highly mobile within the water column cannot readily be located with other methods, such as the tidal location method (TLM). As an alternative, we describe a process that provides estimates of geographic location by simulating movement paths through geographic locations that match temperature and depth data recorded by data loggers. Depths and temperatures recorded by data loggers were compared with a North Sea temperature and depth database to identify all locations with matching data. A movement rate filter was then applied to eliminate spurious locations and simulations of possible movement paths through the remaining positions were used to generate estimates of the likelihood of a particular location having been occupied. The performance of the technique was assessed by reconstructing movement paths of artificial migrations and by using depth and temperature data collected at known locations in the North Sea. Estimates of the positional accuracy and error were comparable to the North Sea TLM. Reconstructions of the migrations of cod tagged and released in the North Sea were successfully achieved with the method. This method has application in defining the movements and migrations of commercial species in any sea area where databases of commonly measured environmental variables are available.     

Restoring piscivorous fish populations in the Laurentian Great Lakes causes seabird dietary change

Ecosystem change often affects the structure of aquatic communities thereby regulating how much and by what pathways energy and critical nutrients flow through food webs. The availability of energy and essential nutrients to top predators such as seabirds that rely on resources near the water's surface will be affected by changes in pelagic prey abundance. Here, we present results from analysis of a 25-year data set documenting dietary change in a predatory seabird from the Laurentian Great Lakes. We reveal significant declines in trophic position and alterations in energy and nutrient flow over time. Temporal changes in seabird diet tracked decreases in pelagic prey fish abundance. As pelagic prey abundance declined, birds consumed less aquatic prey and more terrestrial food. This pattern was consistent across all five large lake ecosystems. Declines in prey fish abundance may have primarily been the result of predation by stocked piscivorous fishes, but other lake-specific factors were likely also important. Natural resource management activities can have unintended consequences for nontarget ecosystem components. Reductions in pelagic prey abundance have reduced the capacity of the Great Lakes to support the energetic requirements of surface-feeding seabirds. In an environment characterized by increasingly limited pelagic fish resources, they are being offered a Hobsonian choice: switch to less nutritious terrestrial prey or go hungry.     

Preservation and Change in the Upland Landscape: The Public Benefits of Grazing Management

A contingent valuation survey was undertaken to estimate the public benefits of landscapechanges that could arise from reductions in grazing levels using the example of the Central Southern Uplands of Scotland. A dichotomous choice with continuous follow-up format was used to quantify the environmentalbenefit in terms of the willingness to pay of the general public and visitors. The paper discusses the merits of this format and the evidence of starting-point bias. In addition, the results are compared with the preferences of locals and interest groups as expressed through focus group sessions and subsets of the survey. A strong preference for more tree cover was evident, a landscape feature not well represented in the current landscape.     

Behaviour and distribution of the sand-beach amphipod Orchestoidea corniculata

The field distribution of Orchestoidea corniculata Stont a talitrid amphipod inhabiting the upper intertidal zone of sandy beaches, was measured by pitfall trap and subsurface core transects. Variations in the distribution of juveniles and adults were recorded. At Coal Oil Point (Goleta, California, USA), the population was concentrated on the leeward side of the Point and, with increasing distance from the Point, both the number and size of beachhoppers decreased. The amphipods burrowed in a 5 to 7 m wide band during the day, and were active over a 15 to 25 m area at night. When they emerged from their burrows, a net seaward movement of 3 m was observed for the population. Behavioural tests suggested that sand penetrability is an important factor determining the location of burrow sites. Diurnal orientation was investigated, and it was found that the amphipods oriented in a landward direction despite overcast sky conditions, beach slope, moisture gradients, or displacement to a new beach.