Landscape context and scale differentially impact coffee leaf rust, coffee berry borer, and coffee root-knot nematodes

Crop pest and disease incidences at plot scale vary as a result of landscape effects. Two main effects can be distinguished. First, landscape context provides habitats of variable quality for pests, pathogens, and beneficial and vector organisms. Second, the movements of these organisms are dependent on the connectivity status of the landscape. Most of the studies focus on indirect effects of landscape context on pest abundance through their predators and parasitoids, and only a few on direct effects on pests and pathogens. Here we studied three coffee pests and pathogens, with limited or no pressure from host-specific natural enemies, and with widely varying life histories, to test their relationships with landscape context: a fungus, Hemileia vastatrix, causal agent of coffee leaf rust; an insect, the coffee berry borer, Hypothenemus hampei (Coleoptera: Curculionidae); and root-knot nematodes, Meloidogyne spp. Their incidence was assessed in 29 coffee plots from Turrialba, Costa Rica. In addition, we characterized the landscape context around these coffee plots in 12 nested circular sectors ranging from 50 to 1500 m in radius. We then performed correlation analysis between proportions of different land uses at different scales and coffee pest and disease incidences. We obtained significant positive correlations, peaking at the 150 m radius, between coffee berry borer abundance and proportion of coffee in the landscape. We also found significant positive correlations between coffee leaf rust incidence and proportion of pasture, peaking at the 200 m radius. Even after accounting for plot level predictors of coffee leaf rust and coffee berry borer through covariance analysis, the significance of landscape structure was maintained. We hypothesized that connected coffee plots favored coffee berry borer movements and improved its survival. We also hypothesized that wind turbulence, produced by low-wind-resistance land uses such as pasture, favored removal of coffee leaf rust spore clusters from host surfaces, resulting in increased epidemics. In contrast, root-knot nematode population density was not correlated to landscape context, possibly because nematodes are almost immobile in the soil. We propose fragmenting coffee plots with forest corridors to control coffee berry borer movements between coffee plots without favoring coffee leaf rust dispersal.     

不同硝/铵比值对小麦幼苗根系释放氢氧根的影响

为研发酸化土壤的生物修复技术,采用水培试验和自动电位滴定装置研究酸性条件下氮素形态对小麦幼苗根系释放氢氧根及培养液pH变化的影响。结果表明,小麦幼苗在初始pH值为4.0,n(NO3-)∶n(NH4+)比值(以下简称硝/铵比)分别为15∶1、3∶1和1∶1的营养液中培养6 d后营养液pH升高,且增幅随硝/铵比的增加而增大,小麦对硝态氮的吸收量和氢氧根释放量呈相同的变化趋势,说明小麦对硝态氮的吸收偏好导致根系释放氢氧根,进而使得培养液pH升高。小麦幼苗在硝/铵比为3∶1,初始pH值分别为4.0、4.5和5.0的营养液中培养6d后,培养液pH和氢氧根释放量的增幅随初始pH的升高而降低,说明低pH条件有利于小麦幼苗对硝态氮的吸收,可促进小麦根系释放更多的氢氧根。10 h的恒定pH试验结果表明,恒定pH条件下小麦根系释放的氢氧根数量大于非恒定pH条件,且硝态氮比例越大,差值越大。因此,可以根据小麦在酸性条件下对硝态氮的吸收偏好建立酸化土壤的生物修复方法,即调节硝态氮含量以加大小麦根系的氢氧根释放量,进而提高土壤pH。     

Design solutions to coastal human-wildlife conflicts

Coastal areas can be a challenge for conservation due to multiple competing land uses including development, tourism, and extractive resource use. These multiple land uses often lead to human-wildlife conflicts. Here we propose that collaboration with industrial designers and architects has the potential to generate innovative and effective solutions to coastal human-wildlife conflicts. Many products for modifying animal behavior are already used by conservationists, such as barriers, corridors, and model predators. We propose that their effectiveness, quality, harmonization with local values, and integration with the designed human environment can be improved through collaboration with designers and architects. We illustrate this approach with a case study. We engaged in an industrial design- conservation collaboration focused on the design of multiple product proposals that would support a range of human-sea lion interactions in public parks and the fish market in Valdivia, Chile. The sea lions in Valdivia are a tourist attraction but also potentially dangerous. We produced images of seven proposed products of varying scales, facilitating a range of different sea lion- human interactions. Such collaborations can be useful for developing products that reduce human-wildlife conflicts and align conservation and management with local values. We urge researchers to publish conservation design proposals as well as tests of existing conservation products?? functionality, in order to improve conservation design practice around the world.     

Towards the development of an operational tool for oil spills management in the Algarve coast

Portugal is strongly vulnerable to sea hazards due to intense vessel traffic and sea conditions. The southwest region off the Iberian Peninsula lies in the main route from the Mediterranean and Southern Hemisphere to the Northern Europe, causing a ship concentration in a narrow band off Cape S?o Vicente. Tankers represent a significant part of the vessel traffic and the occurrence of oil spills cannot be disregarded. Cape S?o Vicente region is part of a Natural Park with 110 Km of coastline, integrated in the European Natura 2000 network and its socio-economic context is closely related with sea resources exploitation, particularly fishing and tourism. Recognizing the importance of accurate information systems for the decision making process in an oil spill situation, this work presents the development of an integrated tool to support the process in the Algarve coast. The system relies in a regional operational mathematical model based on the MOHID modelling system. The system core is composed by three models (3D hydrodynamics, wave and Lagrangian transport) all linked in the same system and exchanging information in real time. Oil advection and weathering processes are coupled to the Lagragian transport model. The overall operational system includes external operational data products as inputs, to ensure a successful validation of the results. The system is linked to stakeholders and response authorities using a geographic referenced database based on Mapserver technology that will include relevant information for oil spill management.     

Heterozygosity‐Fitness Correlations and Inbreeding Depression in Two Critically Endangered Mammals

The relation among inbreeding, heterozygosity, and fitness has been studied primarily among outbred populations, and little is known about these phenomena in endangered populations. Most researchers conclude that the relation between coefficient of inbreeding estimated from pedigrees and fitness traits (inbreeding‐fitness correlations) better reflects inbreeding depression than the relation between marker heterozygosity and fitness traits (heterozygosity‐fitness correlations). However, it has been suggested recently that heterozygosity‐fitness correlations should only be expected when inbreeding generates extensive identity disequilibrium (correlations in heterozygosity and homozygosity across loci throughout the genome). We tested this hypothesis in Mohor gazelle (Gazella dama mhorr) and Iberian lynx (Lynx pardinus). For Mohor gazelle, we calculated the inbreeding coefficient and measured heterozygosity at 17 microsatellite loci. For Iberian lynx, we measured heterozygosity at 36 microsatellite loci. In both species we estimated semen quality, a phenotypic trait directly related to fitness that is controlled by many loci and is affected by inbreeding depression. Both species showed evidence of extensive identity disequilibrium, and in both species heterozygosity was associated with semen quality. In the Iberian lynx the low proportion of normal sperm associated with low levels of heterozygosity was so extreme that it is likely to limit the fertility of males. In Mohor gazelle, although heterozygosity was associated with semen quality, inbreeding coefficient was not. This result suggests that when coefficient of inbreeding is calculated on the basis of a genealogy that begins after a long history of inbreeding, the coefficient of inbreeding fails to capture previous demographic information because it is a poor estimator of accumulated individual inbreeding. We conclude that among highly endangered species with extensive identity disequilibrium, examination of heterozygosity‐fitness correlations may be an effective way to detect inbreeding depression, whereas inbreeding‐fitness correlations may be poor indicators of inbreeding depression if the pedigree does not accurately reflect the history of inbreeding. Correlaciones Heterocigosidad‐ Adaptabilidad y Depresión Endogámica en Dos Especies de Mamíferos Críticamente en Peligro     

Territorial User Rights for Fisheries as Ancillary Instruments for Marine Coastal Conservation in Chile

Territorial user rights for fisheries have been advocated as a way to achieve sustainable resource management. However, few researchers have empirically assessed their potential as ancillary marine conservation instruments by comparing them to no‐take marine protected areas. In kelp (Lessonia trabeculata) forests of central Chile, we compared species richness, density, and biomass of macroinvertebrates and reef fishes among territorial‐user‐right areas with low‐level and high‐level enforcement, no‐take marine protected areas, and open‐access areas in 42 100‐m subtidal transects. We also assessed structural complexity of the kelp forest and substratum composition. Multivariate randomized permutation tests indicated macroinvertebrate and reef fish communities associated with the different access regimes differed significantly. Substratum composition and structural complexity of kelp forest did not differ among access regimes. Univariate analyses showed species richness, biomass, and density of macroinvertebrates and reef fishes were greater in highly enforced territorial‐user‐right areas and no‐take marine protected areas than in open‐access areas. Densities of macroinvertebrates and reef fishes of economic importance were not significantly different between highly enforced territorial‐user‐right and no‐take marine protected areas. Densities of economically important macroinvertebrates in areas with low‐level enforcement were significantly lower than those in areas with high‐level enforcement and no‐take marine protected areas but were significantly higher than in areas with open access. Territorial‐user‐right areas could be important ancillary conservation instruments if they are well enforced. Derechos de Usuario Territoriales para Pesquerías como Instrumentos Accesorios para la Conservación Marina Costera en Chile     

Recurrent disease outbreaks in corneous demosponges of the genus Ircinia: epidemic incidence and defense mechanisms

During 2008 and 2009, an epidemic affected sponges of the genus Ircinia in the Western Mediterranean. Investigations at a site on the European coast (6o43′08.80′′N; 3o43′52.20′′W) and another on the African coast (35o10′51.00′′N; 2o25′33.00′′W) revealed healthier African populations. The disease started with small pustules on the sponge surface, which subsequently coalesced forming larger, extensive lesions. An ultrastructural study suggested that a twisted rod is the etiological agent. It infected the sponges from the outside, initially killing the cells below the ectosome and then penetrating deeper into the body. The sponges responded to the bacterial progression by secreting concentric barriers of collagen and concentrating phagocytic cells at the diseased zones. This primitive immune system successfully resisted the disease in many instances, although mortality reached 27% in the studied populations. Epidemic outbreaks recur each year in September through November, arguably favored by abnormally high seawater temperatures in August.     

Alimentary niche partitioning in the Galapagos sea lion, Zalophus wollebaeki

Sea lions are generally considered opportunistic feeders. However, studies from different areas suggest their diet consists mostly of four to five types of prey. Previous studies in Galapagos sea lions have identified at least three feeding strategies for this species, suggesting diversification of their diet. Diet diversification is favored in organisms with relatively high trophic position and subject to high intra-specific and low inter-specific competition. Zalophus wollebaeki meet these criteria as the only pinniped on San Cristobal Island, where three sea lion rookeries are located within 11 km: a distance considerably shorter than their 41 km foraging range. To measure the degree of diet diversification, we used scats and stable isotope analyses. A total of 270 scat samples from lactating females and 142 fur samples from sea lion pups were collected during the breeding season 2006. The scat analysis identified distinct diets among rookeries, with minimal trophic overlap (Cλ = 0.19), a trophic level TL = 4.5 (secondary–tertiary carnivore), and trophic breadth of a specialist predator (B _i  = 0.37). The mean δ¹⁵N and δ¹³C values were 13.07 ± 0.52 and −16.34 ± 0.37, respectively. No significant difference was found in the δ¹⁵N values from the sea lion rookeries, but differences were found inter- and intra-population in δ¹³C values for pups from different groups (ANOVA P < 0.05). Our results indicate that diet diversification is present in the Galapagos sea lion and may play important role to the survival of the species in a habitat where pinniped populations are limited.     

Habituation to low-risk predators improves body condition in lizards

Habituation to nonlethal predation stimuli may provide benefits for animals living in areas with frequent encounters with low-risk predators. On the other hand, individuals can be very consistent in their antipredator responses, with shy individuals showing greater degree of responsiveness than bold individuals. However, the link between habituation or boldness and individual benefits has not been thoroughly investigated. We established whether and how two behavioral components associated with antipredator responses (habituation and boldness, and their interaction) would influence body condition, which is a parameter related to fitness. We conducted an outdoor semi-natural experiment with Iberian wall lizards (Podarcis hispanica). Individual boldness was consistent across contexts, but we did not find any effect of boldness or the interaction between boldness and habituation on body condition. However, those individuals that habituated more readily to a frequent predatory stimulus were able to increase their body condition more relative to lizards that habituated less. This finding highlights the importance of individual differences in behavioral plasticity, which could influence traits related to fitness. Habituation can provide benefits for individuals exposed to low-risk predators; however, individuals more prone to habituation could also experience mortality costs by wrongly habituating to a dangerous predator.