Genetic Analyses to Establish Captive Breeding Priorities for Endangered Snake River Sockeye Salmon

The plight of the Snake River sockeye salmon presents a challenging genetic puzzle for conservation biologists. Although the Snake River sockeye has been declared endangered, assessment of captive breeding strategies are complicated because a healthy non-migratory strain of O. nerka (kokanee) resides in Redfish Lake, Idaho—the same lake the anadromous fish return to for spawning. The migration of 1-year-old fish (outmigrants) from the lake each year and the observation of non-migratory fish spawning in areas previously used by the sockeye further complicate the issue. We estimated the relatedness of these strains by direct examination of their genetic similarity. Mixed DNA fingerprint analyses suggested that the outmigrants were more closely related to the anadromous sockeye than to the kokanee. Closer analysis using a probe, One-HO.8, to examine allele frequencies at a single locus revealed polymorphism in a number of O. nerka populations. Within the Redfish Lake populations this probe detected an allele present at 0.21 frequency in the kokanee (n = 43), 0.01 (n = 324) in the outmigrants, and absent among 13 anadromous fish. These results support a close genetic relationship of the outmigrants to the anadromous sockeye and the probable utility of the outmigrants in a captive breeding program to restore the anadromous strain.     

Does chorionic villus sampling compromise fetal umbilical blood flow?

A possible association of limb reduction defects with chorionic villus sampling (CVS) may be related to compromised umbilical blood flow from the trauma of the procedure. We hypothesized that because CVS may disrupt or compromise umbilical blood flow to the fetus, either by vasoconstriction, bradycardia, or emboli, we would detect these changes using Doppler velocimetry. A cohort of 21 consecutive consenting patients undergoing first-trimester elective CVS for prenatal diagnosis were entered into a prospective longitudinal study. Colour flow Doppler velocimetry was performed on fetal umbilical arterial blood flow immediately before and after CVS to measure the pulsatility index, fetal heart rate, per cent flow time, and maximum flow velocity. Measurements were obtained from three consecutive cardiac cycles in three different umbilical segments and averaged. Potentially confounding variables also recorded included gestational age, method of CVS, number of passes, number of aspirations, placental location, tissue sample size, and operator. Umbilical velocimetry values before and after CVS were compared using the paired t-test and showed no statistically significant differences. No differences were found when data were analysed by gestational age, sample size, method, number of aspirations, placental location, or operator. We were unable to detect any significant change in fetal umbilical arterial blood flow velocimetry or heart rate after performing CVS. Umbilical blood flow does not appear to be routinely compromised by CVS.     

First-trimester biochemical screening for fetal chromosome abnormalities and neural tube defects

Alpha-fetoprotein (AFP), unconjugated oestriol (UE3), intact human chorionic gonado-trophin (intHCG), and the free β subunit of chorionic gonadotrophin (FβHCG) were investigated in a series of 21 chromosomally abnormal and 14 open neural tube defect pregnancies ascertained from a series of 14 000 prospectively collected maternal serum samples at 6–14 weeks' gestation. In 16 cases of Down's syndrome, significant reductions were found for AFP (0.65 multiples of the normal median) and UE3 (0.67 MOM). IntHCG levels were unaltered (0.97 MOM) but a significant increase was found for FβHCG (1.96 MOM). Significant correlations were found for AFP and UE3 in the controls and for int HCG and FβHCG in both the control and the Down's syndrome pregnancies. In a group of five trisomy 18 pregnancies, median MOMs were for AFP 0. 71 , for UE3 0. 34 , for intHCG 0. 27 , and for FβHCG 0.15. None of 13 pregnancies with open neural tube defects at 8-13 weeks gestation had elevated maternal serum AFP levels, whereas matched second-trimester samples from the same pregnancies at 16-18 weeks gestation all had significantly elevated AFP levels. Thus, biochemical screening for chromosome abnormalities may be practicable in the first trimester using free β human chorionic gonadotrophin in combination with AFP and maternal age. However, a separate screening protocol using AFP at 15-18 weeks gestation would still be required for effective detection of neural tube defects.     

The ozone formation potential of 1-bromo-propane

1-Bromo-propane (1-BP) is a replacement for high-end chlorofluorocarbon (HCFC) solvents. Its reaction rate constant with the OH radical is, on a weight basis, significantly less than that of ethane. However, the overall smog formation chemistry of 1-BP appears to be very unusual compared with typical volatile organic compounds (VOCs) and relatively complex because of the presence of bromine. In smog chamber experiments, 1-BP initially shows a faster ozone build-up than what would be expected from ethane, but the secondary products containing bromine tend to destroy ozone such that 1-BP can have a net overall negative reactivity. Alternative sets of reactions are offered to explain this unusual behavior. Follow-up studies are suggested to resolve the chemistry. Using one set of bromine-related reactions in a photochemical grid model shows that 1-BP would be less reactive toward peak ozone formation than ethane with a trend toward even lower ozone impacts in the future.     

Transport of anthracene and benz(a)anthracene through iron-quartz and three aquifer materials in laboratory columns

In groundwater systems, dissolved natural organic matter (NOM) can influence the mobility of organic contaminants by altering the contaminant behavior in water and solid phases. The transport of anthracene and benz(a)anthracene (B(a)A) was studied in the presence and absence of NOM and/or soil organic matter (SOM) in column experiments. The results show that sorption are related to the properties of polycyclic aromatic hydrocarbons (PAHs), NOM and SOM. In the Fe-quartz media, the amount of NOM (20 mg/l) in solution had a little effect on increasing the apparent solubility of anthracene and countering increased anthracene sorption. In the natural (Bemidji) soil, Suwannee river fulvic acid (SRFA, 20 mg/l) and Suwannee river humic acid (SRHA) in water did not compete with SOM for anthracene, indicating that SOM has higher partition efficiency for anthracene. It was also observed that slow diffusion through an organic phase apparently caused most of the observed tailing in column breakthrough curves (BTCs). Even though the fOC of washed Bemidji sediment was very low, the transport of B(a)A was retarded significantly, however, and the transport of B(a)A was shown to be facilitated by dissolved NOM.     

Sources of polychlorinated biphenyl blank contamination and their impact on fingerprinting

Abstract

The development of high-resolution mass spectrometry methods for the measurement of polychlorinated biphenyls (PCBs) in environmental samples has dramatically reduced detection limits, leading to problems obtaining clean blanks. When PCBs are detected in samples at concentrations similar to the blanks, blank contamination must be addressed before fingerprinting and source apportionment through positive matrix factorization (PMF) can be successful. We tested a variety of blank correction methods using data from a study of water column concentrations of PCBs in the Spokane River, where concentrations of Σ₂₀₉PCBs in whole water samples averaged 171?pg/L without blank correction and Σ₂₀₉PCBs in the blanks averaged 88?pg/L. The results suggest that subtracting blank masses from sample masses can lead to erroneous results. Instead, censoring at one times the batch-specific blank level is a better approach. The sources of PCBs in field and method blanks were investigated by examining their congener profiles via PMF. The results suggest that commercial PCB formulations (in the US, Aroclors) continue to be the primary source of PCBs in blanks forty years after PCB production and use were banned in the United States. Other sources of PCBs to blanks include PCB 11 from pigments; PCBs 44?+?47?+?65, 45?+?51, and 68 arising from polymers cured using bis(2,4-dichlorobenzoyl) peroxide; and PCBs 1, 2, 3, 4, 8, 15 and others arising from silicone products derived from phenylsiloxanes, such as silicone-based adhesives.     

Resistance of nutrient cycling systems to perturbations of the flow rates

The resistance of a nutrient cycling system to a disturbance that alters the flow rates, measured by the displacement of the nutrient levels while the disturbance continues, is as important an aspect of stability as the rate of return to equilibrium after the disturbance ends. Two important characteristics of the resistance of a system are the ultimate displacement that would occur if the disturbance lasted indefinitely, and the rate at which the system approaches the ultimate displacement.The mathematical theory is worked out for linear systems and applied to a group of eight nutrient cycling models. The relative resistance of individual compartments of different systems depends heavily on the period of interest, because of the wide range of magnitudes of the eigenvalues, which determine the response times. However, when measuring the change in total nutrients in a system with small exterior flows compared with the amount of internal cycling, only the critical root is significant in determining the response rate.     

Gyrinid searching tactics: empirical observations and a tactical model

Summary Data on Gyrinus picipes were collected to examine the influence of prey distribution and capture on search path configuration. All paths were analyzed before and after prey capture. Parameters measured were turning angles, step lengths, and step direction. Three indices of search efficiency were calculated: linear displacement, thoroughness, and straightness. Prey distribution had little impact on search configuration. However, prey capture caused significant reductions in step length, linear displacement, and straightness. Thoroughnnes and turning angle increased significantly after prey capture.A simulation model was developed to analyze influences of search parameters on search efficiency. Search paths, simulated using empirically derived parameters, did not differ from actual search paths indicating that the model accurately describes gyrinid search paths and may be used in these analyses. Actual search paths were compared to a simulated Brownian (random) search. Search paths before prey capture were significantly different from random, but Brownian search can describe search paths after prey capture. Comparisons of simulations using various input parameters indicate that step length has the greatest effect on search paths. Turning angles and direction are important before prey capture but not after. Offprint requests to: D.L. Winkelman at his current address