Conservation Genetics at the Species Boundary

Abstract: Conservation genetics has expanded its purview such that molecular techniques are now used routinely to prioritize populations for listing and protection and infer their historical relationships in addition to addressing more traditional questions of heterozygosity and inbreeding depression. Failure to specify whether molecular data are being used for diagnosis-related questions or for population viability questions, however, can lead either to misinterpretation of character data as adaptive information or to misinterpretation of frequency or distance data as diagnostic or historical information. Each of these misinterpretations will confound conservation programs. The character-based approach to delimiting phylogenetic species is both operationally and logically superior to "diagnostic" methods that involve distance- or frequency-based routines, which are unstable over time. Tree-based criteria for the diagnosis of conservation "units" are also inappropriate because they can depend on patterns inferred without reference to diagnostic characters. Intraspecific studies, conservation-related or otherwise, that adopt terminology and methods designed to infer nested hierarchic relationships confuse diagnosis with historical inferences by treating diagnoses as outcomes rather than as precursors to phylogeny reconstruction. A character-based diagnostic approach recognizes the analytical dichotomy between species hierarchies and population statistics and provides a framework for the understanding of each. No species concept, however, should be viewed as an absolute criterion for protecting populations, but as part of a framework from within which identification of protection and management goals can be achieved effectively and defensibly.     

Spatial and temporal variations of mercury levels in Okefenokee invertebrates: southeast Georgia

Accumulation of mercury in wetland ecosystems has raised concerns about impacts on wetland food webs. This study measured concentrations of mercury in invertebrates of the Okefenokee Swamp in Georgia, focusing on levels in amphipods, odonates, and crayfish. We collected and analyzed total mercury levels in these invertebrates from 32 sampling stations across commonly occurring sub-habitats. Sampling was conducted in December, May, and August over a two-year period. The highest levels of mercury were detected in amphipods, with total mercury levels often in excess of 20 ppm. Bioaccumulation pathways of mercury in invertebrates of the Okefenokee are probably complex; despite being larger and higher in the food chain, levels in odonates and crayfish were much lower than in amphipods. Mercury levels in invertebrates varied temporally with the highest levels detected in May. There was a lack of spatial variation in mercury levels which is consistent with aerial deposition of mercury.     

Effect of two major N-nitroso hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) metabolites on earthworm reproductive success

Soil and topical tests were employed to investigate the effect of two N-nitroso metabolites of RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine) on earthworm reproduction. The lowest observed effect concentration (LOEC) for cocoon production and hatching was 50mg/kg for both hexahydro-1-nitroso-3,5-dinitro-1,3,5-triazine (MNX) and hexahydro-1,3,5-trinitroso-1,3,5-triazine (TNX) in soil. MNX and TNX also significantly affected cocoon hatching in soil (p<0.001) and in topical tests (p=0.001). The LOECs for cocoon hatching were 1 and 10mg/kg for MNX and TNX in soil, respectively, and 10mg/L in the topical test. Greater than 100mg/kg MNX and TNX completely inhibited cocoon hatching. In soil, the EC20 values for MNX were 8.7 and 8.8mg/kg for cocoon and juvenile production, respectively, compared to 9.2 and 9.1mg/kg for TNX, respectively. The EC20 values for the total number of cocoon hatchlings were 3.1 and 4.7mg/kg for MNX and TNX, respectively, in soil and 4.5 and 3.1mg/L in the topical test. Both MNX and TNX inhibited cocoon production and hatching, suggesting that they may have a negative affect on soil ecosystems at contaminated sites.     

Multiple regression models: a methodology for evaluating trihalomethane concentrations in drinking water from raw water characteristics

The presence of trihalomethanes (THMs) in drinking water has attracted the attention of both researchers and professionals, because of the harmful effects of these substances on human health. A multiple regression model was developed to estimate THM concentrations in finished drinking water, using data from the Menidi Treatment Plant of Athens. A number of routinely measured characteristics--including chlorine dose, chlorophyll a, temperature, pH and bromide--of raw water, were used to generate a reliable methodology for predicting both total THM and individual species concentrations. Seasonality effects were also considered during the analysis. In general, these models were found to give acceptable fits, estimating accurately lows and highs over the annual cycle.     

Comparison of quartz sand, anthracite, shale and biological ceramsite for adsorptive removal of phosphorus from aqueous solution

The choice of substrates with high phosphorus adsorption capacity is vital for sustainable phosphorus removal from waste water in constructed wetlands. In this study, four substrates were used： quartz sand, anthracite, shale and biological ceramsite. These substrate samples were characterized by X- ray diffractometry and scanning electron microscopy studies for their mineral components （chemical components） and surface characteristics. The dynamic experimental results revealed the following ranking order for total phosphorus （TP） removal efficiency： anthracite 〉 biological ceramsite 〉 shale 〉 quartz sand. The adsorptive removal capacities for TP using anthracite, biological ceramsite, shale and quartz sand were 85.87, 81.44, 59.65, and 55.98 mg/kg, respectively. Phosphorus desorption was also studied to analyze the substrates＇ adsorption efficiency in wastewater treatment as well as the substrates＇ ability to be reused for treatment. It was noted that the removal performance for the different forms of phosphorus was dependent on the nature of the substrate and the adsorption mechanism. A comparative analysis showed that the removal of particulate phosphorus was much easier using shale. Whereas anthracite had the highest soluble reactive phosphorus （SRP） adsorptive capacity, biological ceramsite had the highest dissolved organic phosphorus （DOP） removal capacity. Phosphorus removal by shale and biological ceramsite was mainly through chemical adsorption, precipitation or biological adsorption. On the other hand, phosphorus removal through physical adsorption （electrostatic attraction or ion exchange） was dominant in anthracite and quartz sand.     

离子交换树脂静态吸附二甲胺的研究

通过静态吸附实验,研究了二甲胺在ZGSPC106型细颗粒树脂上的吸附行为,从热力学和动力学角度对吸附过程进行了分析,并用红外光谱的方法探讨了树脂吸附二甲胺的机理.结果表明,Langmuir等温方程能够很好的拟合吸附平衡数据,热力学参数表明该吸附可自发进行,且为熵增加的吸热过程,293K温度下树脂的静态饱和吸附容量为138.89mg/g(干树脂);吸附动力学符合准二级动力学模型,颗粒扩散是树脂吸附二甲胺速率的主要控制步骤.     

Efficacy of extracting indices from large‐scale acoustic recordings to monitor biodiversity

Passive acoustic monitoring could be a powerful way to assess biodiversity across large spatial and temporal scales. However, extracting meaningful information from recordings can be prohibitively time consuming. Acoustic indices (i.e., a mathematical summary of acoustic energy) offer a relatively rapid method for processing acoustic data and are increasingly used to characterize biological communities. We examined the relationship between acoustic indices and the diversity and abundance of biological sounds in recordings. We reviewed the acoustic‐index literature and found that over 60 indices have been applied to a range of objectives with varying success. We used 36 of the most indicative indices to develop a predictive model of the diversity of animal sounds in recordings. Acoustic data were collected at 43 sites in temperate terrestrial and tropical marine habitats across the continental United States. For terrestrial recordings, random‐forest models with a suite of acoustic indices as covariates predicted Shannon diversity, richness, and total number of biological sounds with high accuracy (R² ≥ 0.94, mean squared error [MSE] ≤170.2). Among the indices assessed, roughness, acoustic activity, and acoustic richness contributed most to the predictive ability of models. Performance of index models was negatively affected by insect, weather, and anthropogenic sounds. For marine recordings, random‐forest models poorly predicted Shannon diversity, richness, and total number of biological sounds (R² ≤ 0.40, MSE ≥ 195). Our results suggest that using a combination of relevant acoustic indices in a flexible model can accurately predict the diversity of biological sounds in temperate terrestrial acoustic recordings. Thus, acoustic approaches could be an important contribution to biodiversity monitoring in some habitats.     

Perceived barriers to and drivers of community participation in protected‐area governance

Protected areas (PAs) are a frequently used conservation strategy, yet their socioeconomic impacts on local communities remain contentious. A shift toward increased participation by local communities in PA governance seeks to deliver benefits for human well‐being and biodiversity. Although participation is considered critical to the success of PAs, few researchers have investigated individuals’ decisions to participate and what this means for how local people experience the costs and benefits of conservation. We explored who participates in PA governance associations and why; the perceived benefits and costs to participation; and how costs and benefits are distributed within and between communities. Methods included 3 focus groups, 37 interviews, and 217 questionnaire surveys conducted in 3 communities and other stakeholders (e.g., employees of a nongovernmental organization and government officials) in PA governance in Madagascar. Our study design was grounded in the theory of planned behavior (TPB), the most commonly applied behavior model in social psychology. Participation in PA governance was limited by miscommunication and lack of knowledge about who could get involved and how. Respondents perceived limited benefits and high costs and uneven distribution of these within and between communities. Men, poorer households, and people in remote villages reported the highest costs. Our findings illustrate challenges related to comanagement of PAs: understanding the heterogeneous nature of communities; ensuring all households are represented in governance participation; understanding differences in the meaning of forest protection; and targeting interventions to reach households most in need to avoid elite capture.     

Treatability studies as a remedial option screening tool for contaminated soils

As the limitations of site remedial technologies become more apparent and greater experience in their field implementation and effectiveness is gained, increased emphasis is placed on development of a structured technology selection process. Ideally, this selection process should yield the most cost-effective technology, which will accomplish cleanup goals in the shortest time frame. Although laboratory treatability studies comprise an essential component of this process, very little has been written about the methodology of designing, executing, and assessing the value of their results. This article presents practical considerations for environmental professionals who use treatability results in technology selection or others who execute such studies.     

When is a Life Too Costly to Save? The Evidence from U.S. Environmental Regulations

Under certain environmental statutes the EPA is required to balance costs and benefits in setting standards, whereas under others this is prohibited. This paper examines EPA regulatory decisions made under three statues, two of which require balancing and one of which does not. Using discrete choice models, we find that costs and benefits are significant explanatory variables for all three sets of decisions. This suggests that balancing occurred in each case; however, the value (implicit in these decisions) of avoiding a cancer case varies widely. We also find that a 1987 court ruling effectively curtailed whatever balancing occurred under the statute that prohibited it.