Microbial RNA and DNA synthesis in marine sediments

A technique for measuring rates of RNA and DNA synthesis in sedimentary microbial communities has been adapted from methods developed for marine and freshwater microplankton research. The procedure measures the uptake, incorporation and turnover of exogenous [2, ³H]-adenine by benthic microbial populations. With minor modification, it is applicable to a wide range of sediment types. Measurement of nucleic acid synthesis rates are reported from selected benthic marine environments, including coral reef sediments (Kaneohe Bay, Oahu, Hawaii), intertidal beach sands (Oahu and southern California) and California borderland basin sediment (San Pedro Basin), and comparisons are made to selected water-column microbial communities. Biomass-specific rates of nucleic acid synthesis in sediment microbial communities were comparable to those observed in water-column assemblages (i.e., 0.02 to 2.0 pmol deoxyadenine incorporated into DNA [ng ATP]^-1 h^-1 and 0.2 to 8.9 pmol adenine incorporated into RNA [ng ATP]^-1 h^-1). DNA synthesis rates were used to calculate carbon production estimates ranging from 2 g C cm^-3 h^-1 in San Pedro Basin sediment (880 m water depth) to 807 g C cm^-3 h^-1 in coral reef sediment from the Kaneohe Bay. Microbial community specific growth rate, (d^-1), estimated from DNA synthesis rates in surface sediments ranged from 0.1 in San Pedro Basin to 4.2 in Scripps Beach (La Jolla, California) intertidal sand.     

Temporal scales of landscape change following storms on a human-altered coast,New Jersey,USA

Cycles of storm destruction and rebuilding of human facilities are as much a part of a predictable cycle of shoreline change as destruction and re-establishment of landforms and wildlife habitat by natural processes. An evaluation of the human-induced and natural geomorphic responses to three storms in two vulnerable developed areas in New Jersey reveals that storms can have limited effect in re-establishing a natural coastal resource base of lasting significance. Reconstruction of coastal landscapes by human action may be more rapid than natural restoration, decreasing the likelihood for geomorphic features to develop based on natural processes. Reliance on storm processes to create new natural habitat in locations where there is human investment in buildings and support infrastructure is not realistic unless a proactive stance is taken to include naturally-functioning characteristics of the coastal system in reconstruction efforts. By striving to control construction of shorefront buildings to reduce their potential for damage, managers may be taking attention away from the separate but critical issue of ensuring that post-storm reconstruction effort include the potential for replacing loss of natural geomorphic features and wildlife habitat.     

The outcome of in-vitro contests between larvae of the endoparasitoid<Emphasis Type="Italic"> Venturia canescens</Emphasis> depends on both their relative and absolute ages

In a laboratory colony of the asexual solitary endoparasitoid Venturia canescens Grav. (Hymenoptera: Ichneumonidae), two genetically and phenotypically distinct lines (RP and RM) appear to coexist sympatrically, with the reproductive success of the RM-line being greater under con-specific superparasitism but lower under self superparasitism. To investigate the basis of the RM-lines advantage under con-specific superparasitism, we examined the outcome of inter-larval physical combat under in-vitro conditions. The results showed that the outcome depended on both the relative and absolute ages of the contestants, and that the competitive abilities of the two lines were not symmetric. In contests involving a larva and an egg, the unhatched wasp lost. In contests involving two larvae, at least one of which was newly hatched, the RP-larva tended to lose. Finally, if both larvae were at least 8–10 h post-hatching when the contest occurred, then the larger larva tended to lose, with the probability increasing with the difference in length between the two larvae. Thus, the higher reproductive success of the RM-line under competing superparasitism with the RP-line is due to a physiological difference between the newly hatched larvae of the two lines, which results in an advantage to the RM-larva independent of the order or time interval between ovipositions.Communicated by P. Heeb     

Denitrification in nitrate-rich streams: application of N2:Ar and 15N-tracer methods in intact cores.

Rates of benthic denitrification were measured using two techniques, membrane inlet mass spectrometry (MIMS) and isotope ratio mass spectrometry (IRMS), applied to sediment cores from two NO3(-)-rich streams draining agricultural land in the upper Mississippi River Basin. Denitrification was estimated simultaneously from measurements of N2:Ar (MIMS) and 15N[N2] (IRMS) after the addition of low-level 15NO3- tracer (15N:N = 0.03-0.08) in stream water overlying intact sediment cores. Denitrification rates ranged from about 0 to 4400 micromol N x m(-2) x h(-1) in Sugar Creek and from 0 to 1300 micromol N x m(-2) x h(-1) in Iroquois River, the latter of which possesses greater streamflow discharge and a more homogeneous streambed and water column. Within the uncertainties of the two techniques, there is good agreement between the MIMS and IRMS results, which indicates that the production of N2 by the coupled process of nitrification/denitrification was relatively unimportant and surface-water NO3- was the dominant source of NO3- for benthic denitrification in these streams. Variation in stream NO3- concentration (from about 20 micromol/L during low discharge to 1000 micromol/L during high discharge) was a significant control of benthic denitrification rates, judging from the more abundant MIMS data. The interpretation that NO3- concentration directly affects denitrification rate was corroborated by increased rates of denitrification in cores amended with NO3-. Denitrification in Sugar Creek removed < or = 11% per day of the instream NO3- in late spring and removed roughly 15-20% in late summer. The fraction of NO3- removed in Iroquois River was less than that of Sugar Creek. Although benthic denitrification rates were relatively high during periods of high stream flow, when NO3 concentrations were also high, the increase in benthic denitrification could not compensate for the much larger increase in stream NO3- fluxes during high flow. Consequently, fractional NO3- losses were relatively low during high flow.     

Gastroliths in<Emphasis Type="Italic"> Yanornis</Emphasis>: an indication of the earliest radical diet-switching and gizzard plasticity in the lineage leading to living birds?

Yanornis martini is an Early Cretaceous basal ornithurine bird. Its fish-eating diet was previously recognized from a discrete mass of disarticulated fish remains discovered in its abdominal region. A new complete and articulated specimen of Yanornis martini preserves abundant in-situ gastroliths such as have been associated with a herbivorous diet. We suggest that the occurrence of gastroliths in this specimen, fish remains in a second, and the lack of gastroliths in three others, is consistent with diet-switching in Yanornis martini. Incompatibility of the preserved data with explanations of the grit as an artifact of preservation or result of accidental ingestion is discussed. This discovery indicates the earliest presence of intermittent diet change (and associated gizzard plasticity) observed in extant birds seasonally and in response to changes in available food sources.     

Diphenylamine and derivatives in the environment: a review

Diphenylamine (DPA) is a compound from the third European Union (EU) list of priority pollutants. It was assigned by the EU to Germany to assess and control its environmental risks. DPA and derivatives are most commonly used as stabilizers in nitrocellulose-containing explosives and propellants, in the perfumery, and as antioxidants in the rubber and elastomer industry. DPA is also widely used to prevent post-harvest deterioration of apple and pear crops. DPA is a parent compound of many derivatives, which are used for the production of dyes, pharmaceuticals, photography chemicals and further small-scale applications. Diphenylamines are still produced worldwide by the chemical industries. First reports showed that DPA was found in soil and groundwater. Some ecotoxicological studies demonstrated the potential hazard of various diphenylamines to the aquatic environment and to bacteria and animals. Studies on the biodegradability of DPA and its derivatives are very sparse. Therefore, further investigation is required to determine the complete dimension of the potential environmental hazard and to introduce possible (bio)remediation techniques for sites that are contaminated with this class of compounds. This is the first detailed review on DPA and some derivatives summarizing their environmental relevance as it is published in the literature so far and this review will recommend conducting further research in the future.