Unprecedented Low Levels of Genetic Variation and Inbreeding Depression in an Island Population of the Black-Footed Rock-Wallaby

Abstract: It has been argued that demographic and environmental factors will cause small, isolated populations to become extinct before genetic factors have a significant negative impact. Islands provide an ideal opportunity to test this hypothesis because they often support small, isolated populations that are highly vulnerable to extinction. To assess the potential negative impact of isolation and small population size, we compared levels of genetic variation and fitness in island and mainland populations of the black-footed rock-wallaby ( Petrogale lateralis [Marsupialia: Macropodidae]). Our results indicate that the Barrow Island population of P. lateralis has unprecedented low levels of genetic variation (  H _e = 0.053, from 10 microsatellite loci) and suffers from inbreeding depression (reduced female fecundity, skewed sex ratio, increased levels of fluctuating asymmetry). Despite a long period of isolation ( ∼ 1600 generations) and small effective population size (  N _e ∼ 15), demographic and environmental factors have not yet driven this population to extinction. Nevertheless, it has been affected significantly by genetic factors. It has lost most of its genetic variation and become highly inbred (  F _e = 0.91), and it exhibits reduced fitness. Because several other island populations of P. lateralis also exhibit exceptionally low levels of genetic variation, this phenomenon may be widespread. Inbreeding in these populations is at a level associated with high rates of extinction in populations of domestic and laboratory species. Genetic factors cannot then be excluded as contributing to the extinction proneness of small, isolated populations.     

Using historical ecology to reassess the conservation status of coniferous forests in Central Europe

Forests cover approximately one‐third of Central Europe. Oak (Quercus) and European beech (Fagus sylvatica) are considered the natural dominants at low and middle elevations, respectively. Many coniferous forests (especially of Picea abies) occur primarily at midelevations, but these are thought to have resulted from forestry plantations planted over the past 200 years. Nature conservation and forestry policy seek to promote broadleaved trees over conifers. However, there are discrepancies between conservation guidelines (included in Natura 2000) and historical and palaeoecological data with regard to the distribution of conifers. Our aim was to bring new evidence to the debate on the conservation of conifers versus broadleaved trees at midelevations in Central Europe. We created a vegetation and land‐cover model based on pollen data for a highland area of 11,300 km² in the Czech Republic and assessed tree species composition in the forests before the onset of modern forestry based on 18th‐century archival sources. Conifers dominated the study region throughout the entire Holocene (approximately 40–60% of the area). Broadleaved trees were present in a much smaller area than envisaged by current ideas of natural vegetation. Rather than casting doubt on the principles of Central European nature conservation in general, our results highlight the necessity of detailed regional investigations and the importance of historical data in challenging established notions on the natural distribution of tree species.     

The relationship between agricultural intensification and biological control: experimental tests across Europe

Agricultural intensification can affect biodiversity and related ecosystem services such as biological control, but large-scale experimental evidence is missing. We examined aphid pest populations in cereal fields under experimentally reduced densities of (1) ground-dwelling predators (-G), (2) vegetation-dwelling predators and parasitoids (-V), (3) a combination of (1) and (2) (-G-V), compared with open-fields (control), in contrasting landscapes with low vs. high levels of agricultural intensification (AI), and in five European regions. Aphid populations were 28%, 97%, and 199% higher in -G, -V, and -G-V treatments, respectively, compared to the open fields, indicating synergistic effects of both natural-enemy groups. Enhanced parasitoid: host and predator: prey ratios were related to reduced aphid population density and population growth. The relative importance of parasitoids and vegetation-dwelling predators greatly differed among European regions, and agricultural intensification affected biological control and aphid density only in some regions. This shows a changing role of species group identity in diverse enemy communities and a need to consider region-specific landscape management.     

Best management practices for nutrient and sediment retention in urban stormwater runoff

Stormwater management infrastructure is utilized in urban areas to alleviate flooding caused by decreased landscape permeability from increased impervious surface cover (ISC) construction. In this study, we examined two types of stormwater detention basins, SDB-BMPs (stormwater detention basin-best management practice), and SDB-FCs (stormwater detention basin-flood control). Both are constructed to retain peak stormwater flows for flood mitigation. However, the SDB-BMPs are also designed using basin topography and wetland vegetation to provide water quality improvement (nutrient and sediment removal and retention). The objective of this study was to compare SDB (both SDB-BMP and SDB-FC) surface soil P concentrations, P saturation, and Fe chemistry with natural riparian wetlands (RWs), using sites in Fairfax County, Virginia as a model system. The SDB-BMPs had significantly greater surface soil total P (P(t)) concentrations than the RWs and SDB-FCs (831.9 +/- 32.5 kg ha(-1), 643.3 +/- 19.1 kg ha(-1), and 652.1 +/- 18.8 kg ha(-1), respectively). The soil P sorption capacities of SDB-BMPs were similar to the RWs, and were greater than those of SDB-FCs, appearing to result in greater soil P removal and retention in SDB-BMPs compared with SDB-FCs. Increased Fe concentrations and relatively greater amounts of more crystalline forms of Fe in SDB-BMP soils suggested increased sediment deposition compared with RW and SDB-FC soils. Data suggest that SDB nutrient and sediment retention is facilitated in SDB-BMPs. When stormwater management is necessary, use of SDB-BMPs instead of SDB-FCs could foster more responsible urban development and be an appropriate mitigation action for receiving aquatic ecosystems.     

Case study of testing heavy‐particle concentrator‐aided remediation of lead‐contaminated rifle shooting range soil

Trials were conducted to optimize the parameters of a heavy‐particle concentrator (HPC) for the remediation of soil stockpiles contaminated by metallic lead at the Mount Stuart training area in Townsville, Queensland, Australia. A range of treatment methods, including orbital screen, HPC, and a combination of orbital screen and HPC were evaluated. The treatment efficiency, as well as reductions in Pb and Australian Standard Teaching Procedure values, was ranked: Orbital screen + HPC < HPC < 2nd run through HPC. The combination of orbital screening, HPC, and phosphate‐aided immobilization completely remediated the stockpiled material by reducing total lead to below the Australian National Environmental Protection Measure Health Investigation Level for Soil Contaminant (Recreational; < 600 milligrams lead per kilogram). The optimized parameters of HPC at 4 tonnes per hour of the < 40 millimeter (mm) orbital screen feed fraction were: inclination angle 4°, trommel speed 1,860 revolutions per minute (rpm), HPC belt speed 3.5 rpm, material distribution chute extension 100 mm and water flow 480 liters per minute.     

Transatlantic migration by post-breeding puffins: a strategy to exploit a temporarily abundant food resource?

The distribution of Atlantic puffins (Fratercula arctica) from Skellig Michael, south-west Ireland, was investigated using geolocation loggers between the 2010 and 2011 breeding seasons. All tracked birds travelled rapidly west into the North Atlantic at the end of the breeding season in August, with the majority undertaking transatlantic trips from Ireland to the Newfoundland-Labrador shelf. The furthest distance from the colony reached by each bird was not influenced by body mass or sex and was achieved in approximately 20 days. By October, all birds had moved back to the mid Atlantic where they remained resident until returning to the breeding colony. The most parsimonious explanation for the rapid, directed long-distance migration is that birds exploit the seasonally high abundance of prey [e.g., fish species such as capelin (Mallotus villosus) and sandlance (Ammodytes spp.)] off the Canadian coast, which is also utilised by large populations of North American seabirds at this time. Once the availability of this short-term prey resource has diminished, the tracked puffins moved back towards the north-east Atlantic. A relationship between relative abundance of puffins and zooplankton was found in all winter months, but after correcting for spatial autocorrelation, was only significant in November and January. Nevertheless, these results suggest a potential switch in diet from mainly fish during the breeding and early post-breeding periods to zooplankton over the remaining winter period. This study suggests that puffins from south-west Ireland have a long-distance migration strategy that is rare in breeding puffins from the UK and identifies a key non-breeding destination for puffins from Ireland. This has implications for the susceptibility of different breeding populations to the effects of possible climatic or oceanographic change.     

Development of an Ecologic Marine Classification in the New Zealand Region

We describe here the development of an ecosystem classification designed to underpin the conservation management of marine environments in the New Zealand region. The classification was defined using multivariate classification using explicit environmental layers chosen for their role in driving spatial variation in biologic patterns: depth, mean annual solar radiation, winter sea surface temperature, annual amplitude of sea surface temperature, spatial gradient of sea surface temperature, summer sea surface temperature anomaly, mean wave-induced orbital velocity at the seabed, tidal current velocity, and seabed slope. All variables were derived as gridded data layers at a resolution of 1 km. Variables were selected by assessing their degree of correlation with biologic distributions using separate data sets for demersal fish, benthic invertebrates, and chlorophyll-a. We developed a tuning procedure based on the Mantel test to refine the classification's discrimination of variation in biologic character. This was achieved by increasing the weighting of variables that play a dominant role and/or by transforming variables where this increased their correlation with biologic differences. We assessed the classification's ability to discriminate biologic variation using analysis of similarity. This indicated that the discrimination of biologic differences generally increased with increasing classification detail and varied for different taxonomic groups. Advantages of using a numeric approach compared with geographic-based (regionalisation) approaches include better representation of spatial patterns of variation and the ability to apply the classification at widely varying levels of detail. We expect this classification to provide a useful framework for a range of management applications, including providing frameworks for environmental monitoring and reporting and identifying representative areas for conservation.     

Reef size and isolation determine the temporal stability of coral reef fish populations

Temporal variance in species abundance, a potential driver of extinction, is linked to mean abundance through Taylor's power law, the empirical observation of a linear log-log relationship with a slope between 1 and 2 for most species. Here we test the idea that the slope of Taylor's power law can vary both among species and spatially as a function of habitat area and isolation. We used the world's most extensive database of coral reef fish communities comprising a 15-year series of fish abundances on 43 reefs of Australia's Great Barrier Reef. Greater temporal variances were observed at small and isolated reefs, and lower variances at large and connected ones. The combination of reef area and isolation was associated with an even greater effect on temporal variances, indicating strong empirical support for the idea that populations on small and isolated reefs will succumb more frequently to local extinction via higher temporal variability, resulting in lower resilience at the community level. Based on these relationships, we constructed a regional predictive map of the dynamic fragility of coral reef fish assemblages on the Great Barrier Reef.     

Transmitter attachment and release methods for short-term shark and stingray tracking on coral reefs

This study details a simple and cost-effective means of attaching acoustic transmitters to coral reef sharks and stingrays, which potentially allows for retrieval and reuse on completion of tracks. Between 2008 and 2011, galvanised timed releases were trialled in both static field tests and on blacktip reef sharks Carcharhinus melanopterus, cowtail Pastinachus atrus, and porcupine Urogymnus asperrimus rays in Coral Bay (?23°08′41″, 113°45′53″), Western Australia. The timed releases remained attached to animals for the duration required for tracking and in four out of five deployments transmitters were recovered after release from the animals. The use of modified Rototags for sharks and stainless steel darts for stingrays allowed rapid and effective attachment to animals, with limited impact on their welfare in the short term. External attachment for short-term tracking of coral reef-associated elasmobranchs should be considered as a complementary option to internal placement of transmitters in animals either by surgery or by ingestion.     

The thief process for mercury removal from flue gas

The Thief Process is a cost-effective variation to activated carbon injection (ACI) for removal of mercury from flue gas. In this scheme, partially combusted coal from the furnace of a pulverized coal power generation plant is extracted by a lance and then re-injected into the ductwork downstream of the air preheater. Recent results on a 500-lb/h pilot-scale combustion facility show similar removals of mercury for both the Thief Process and ACI. The tests conducted to date at laboratory, bench, and pilot-scales demonstrate that the Thief sorbents exhibit capacities for mercury from flue gas streams that are comparable to those exhibited by commercially available activated carbons. A patent for the process was issued in February 2003. The Thief sorbents are cheaper than commercially-available activated carbons; exhibit excellent capacities for mercury; and the overall process holds great potential for reducing the cost of mercury removal from flue gas. The Thief Process was licensed to Mobotec USA, Inc. in May of 2005.