Behavior of a hammerhead ribozyme in aqueous solution at medium to high temperatures

The “RNA world” hypothesis proposes that—early in the evolution of life—RNA molecules played important roles both in information storage and in enzymatic functions. However, this hypothesis seems to be inconsistent with the concept that life may have emerged under hydrothermal conditions since RNA molecules are considered to be labile under such extreme conditions. Presently, the possibility that the last common ancestor of the present organisms was a hyperthermophilic organism which is important to support the hypothesis of the hydrothermal origin of life has been subject of strong discussions. Consequently, it is of importance to study the behavior of RNA molecules under hydrothermal conditions from the viewpoints of stability, catalytic functions, and storage of genetic information of RNA molecules and determination of the upper limit of temperature where life could have emerged. In the present work, self-cleavage of a natural hammerhead ribozyme was examined at temperatures 10–200?°C. Self-cleavage was investigated in the presence of Mg²⁺, which facilitates and accelerates this reaction. Self-cleavage of the hammerhead ribozyme was clearly observed at temperatures up to 60?°C, but at higher temperatures self-cleavage occurs together with hydrolysis and with increasing temperature hydrolysis becomes dominant. The influence of the amount of Mg²⁺ on the reaction rate was also investigated. In addition, we discovered that the reaction proceeds in the presence of high concentrations of monovalent cations (Na⁺ or K⁺), although very slowly. Furthermore, at high temperatures (above 60?°C), monovalent cations protect the ribozyme against degradation.     

Expansion of Calamagrostis villosa in sub-alpine Nardus stricta grassland: Cessation of cutting management or high nitrogen deposition?

Calamagrostis villosa has recently expanded in Nardus stricta-dominated sub-alpine grassland of the Giant Mountains (Krkono?e/Karkonosze, the Czech Republic). To investigate whether this expansion has been promoted by high nitrogen deposition or by the cessation of agricultural management, grassland plots dominated by C. villosa were manipulated with four treatments: control (Con), fertilised (Fer), cut (Cut) and cut–fertilised (Cut–Fer). NH₄NO₃ was used at the rate of 30 kg N ha^?1 and fertilisation and cutting were performed once a year after data collection in late July between 2000 and 2006.Plant species composition (analysed by RDA) was significantly influenced by cutting but not by fertilisation. Cutting reduced the cover, biomass, sward height and tiller density of C. villosa. Seedlings of N. stricta and panicles of C. villosa were recorded only in plots with cutting management.To investigate the effect of treatments on the spread of C. villosa, grassland sods dominated by N. stricta were transplanted into the experimental plots. Six years later, the density and cover of C. villosa spreading into the N. stricta sods were highest in Fer treatment.C. villosa was recognised as a defoliation-sensitive species and this sensitivity cannot be overcome by an increase in N supply. Recent expansion of C. villosa in the sub-alpine grassland can by explained by a long-term succession after the cessation of agricultural management and an increase in the N availability in recent decades.     

Entwicklung eines Sedimentbiotests mit der ZwergdeckelschneckePotamopyrgus antipodarum (Gastropoda: Prosobranchia)

Currently, only few organismic biotest systems are available for the assessment of effects on reproduction, which consider an exposure toward whole sediments. A well-suited test organism is the parthenogenetic mudsnailPotamopyrgus antipodarum. This ovoviviparous prosobranch snail lives in the upper layers of freshwater and brackish sediments. The number of (unshelled) embryos turned out to be a very sensitive parameter for the indication of sediment components affecting reproduction. Additionally, this endpoint allows to signal possible estrogenic sediment compounds. With this 28-day bioassay, laboratory tests on the effects of various chemicals onP. antipodarum were performed, e.g. triphenyltin and bisphenol A, in relevant environmental concentration ranges. Furthermore, the suitability of our test system for the investigation of complex and multiple level ranged contaminations was examined by means of various natural sediments from the Neiße and Odra rivers.     

Ecotoxicology of alpine streams in the West Carpathians—Alpine Bullhead (Cottus poecilopus) and high mountain flash flood effects

Environmental Science and Pollution Research - Flash floods represent a serious threat to wildlife, water biota, and human life in pre-alpine regions, particularly in recent historical memory. The...