Characterisation and identification of carbofuran-utilising bacteria isolated from agricultural soil

A total of 96 bacterial cultures were isolated from soil. Seventeen bacterial isolates were selected following their cultivation on solid media containing 100 mg · L^?1 carbofuran as the sole source of carbon and nitrogen. Of the 17 isolates, 10F, 11M, 17N, 23B and 26M were specifically chosen because of their relatively higher growth efficiency and genetic diversity based on Box-polymerase chain reaction analysis. These bacterial cultures had 16S rRNA gene sequences that were most similar to Acinetobacter baumannii (10F), Agrobacterium tumefaciens (11M), Ochrobactrum anthropi (17N), Escherichia coli (23B) and Agrobacterium tumefaciens (26M) with 97, 95, 93, 95 and 94% similarity in their 16S rDNA gene sequence, respectively. Degradation rates of carbofuran in soil inoculated with these isolates were 1.9, 1.5, 1.6, 1.7 and 1.6 times, respectively, faster in comparison with uninoculated soil after 10 days of incubation. The maximum degradation rates of carbofuran (45 and 91%) were detected in soil inoculated with A. baumannii (10F) after 10 and 20 days’ incubation, respectively. These data indicate that these isolates may have the potential for use in bioremediation of pesticide contaminated soil.     

Temporal variation of the concentration and biochemical composition of seston within the Humboldt Current System off northern Chile (21°S)

Seasonal differences in the concentration and biochemical composition of seston have been assessed for the first time in the Humboldt Current System off northern Chile (21°S). The study comprised four seasonal surveys in the Bay of Chipana, including the summer and winter of 2006 and 2007, when El Niño 2006 and La Niña 2007 developed. Protein, lipid, carbohydrate and biogenic silica contents were measured in samples collected at four selected depths. The highest protein, lipid and carbohydrate concentrations were found at the fluorescence maximum (between 10 and 15 m depth), whereas the highest biogenic silica concentration was found 1 m above the seabed. When El Niño started developing, every variable showed low values throughout the water column; however, the lowest values were found when La Niña conditions dominated, together with low oxygen concentrations. Samples collected within the oxygen minimum zone (65 m depth) showed the lowest values for the water column and the lowest seasonal variations. After the evident decline coincident with El Niño 2006, the abundance and biochemical quality (high protein and lipid contents) of seston recovered earlier in the surface layer (upper 15 m) than at other depths.     

Extreme events and environmental changes: Tracing sedimentary processes in Central Vietnam coastal lagoons

Sediment cores, obtained in 2004–2005 and in 2008 from seven coastal lagoons of Central Vietnam (Lang Co, Nuoc Man, Nuoc Ngot, Thi Nai, O Loan, Thuy Trieu and Dam Nai), were analysed to assess changes in ²¹⁰Pb, porosity, grain size, and depth distributions of selected major and trace elements (Al, As, Ni, and Zn). The aim was to trace sedimentary processes in areas periodically subject to extreme events. The occurrence of lateral sedimentary inhomogeneities has been hypothesised to explain the differences observed at depth for some tracer profiles, whereas topmost levels present evidence that accounts for the loss of a sediment layer (from 2.0 to 7.5 cm thick) between the two samplings. These losses might be attributed to major typhoons that impacted the coasts of Central Vietnam during the study period.     

Behaviour of pendimethalin and oxyfluorfen in peanut field soil: effects on soil biological and biochemical activities

A field experiment was conducted to study the dissipation kinetics of herbicides pendimethalin and oxyfluorfen in black soil of peanut field at half recommended rate (HRE), recommended rate and double recommended rate as well as to assess their effects on soil microbial parameters and enzymatic activities. In addition, their role in the transformations and availability of some plant nutrients like nitrogen transformation (through ammonification and nitrification processes) and availability of phosphorous were also studied. Incorporation of these herbicides was found to stimulate the activity of soil microbial biomass carbon, fluorescein diacetate hydrolysing activity, alkaline phosphatase and ammonification rates, while dehydrogenase activity, acid phosphatase, nitrification rate and available phosphorous was adversely affected. However, urease remains almost unchanged except for little stimulation at later stages. Dissipation of pendimethalin and oxy?uorfen followed first-order reaction kinetics with half-life (T_1/2) of 13.7–20.1 and 21.5–27.4 days, respectively. Residues of both herbicides persisted up to 60 days in the soil at all the doses except 45 days for pendimethalin at HRE.     

Effect of cypermethrin on breeding performances of a freshwater fish,Labeo rohita (Hamilton)

Abstract

Concentrations of the related elements calcium, strontium, barium, and lead were determined in soil extract, consumer stomach contents, and consumers in lead polluted and unpolluted areas. Discrimination against the nonessential metals relative to the nutritious metal calcium, as the metals were transferred through a trophic pathway was determined. Discrimination of metals varied systematically as a function of degree of nonessential element similarity to calcium. The existence of systematic trends of discrimination may facilitate the assessment of natural levels of some toxic elements (e.g. lead) in organisms.     

Transport of Sewage Sludge in a Mixed Water Column

Abstract

Sewage sludge from four publicly-owned treatment works was sampled and characterized in terms of parameters affecting transport at the 106-mile deep ocean disposal site as part of the US Environmental Protection Agency's site monitoring programme. Samples from treatment plants in Passaic Valley, Rahway, and Elizabeth, New Jersey and New York City were characterized in terms of dynamic size distribution, suspended solids and density. the transport characteristics of sludge particles were measured using a 2 metre computer-interfaced laboratory settling column. Experiments were conducted at constant salinity (35 ppt) while varying hydrodynamic mixing, sludge type and concentration using a modified factorial experimental design. Hydrodynamic power dissipation was varied so that the vertical dispersion and rms fluid shear rate ranged between 0-6 cm²S^?1 and 0-30s^?1 respectively. Results indicate that at least 80% of suspended sludge particles will eventually settle under mixed conditions. the average settling velocities ranged between 0.05-4.05 × 10^-3 cm ^s-1. Shear rates above 15 s^?1 inhibited sludge settling due to aggregate breakup and boundary effects, but at a lower shear rate, differential settling and fluid shear were the dominant transport mechanisms. Sludge dilution (1/500-1/5000) had a limited effect on the settling rate. Results from this study can be used to calibrate particle transport models to determine the fate of sludge disposed at an ocean disposal site.     

Organic and Inorganic Characterization of Marine Colloids

Abstract

Isolates of the organic matter in the particulate, colloidal and dissolved states were obtained by tangential flow ultrafiltration through 0.40 μm polycarbonate and ～ 1 nm (1000 NMWL?) regenerated cellulose membranes and by solid-liquid reverse phase extraction techniques. the material was analyzed qualitatively by mass spectroscopy, proton nuclear magnetic resonance, Fourier transform infrared spectroscopy, high performance liquid chromatography with fluorescence detection of labelled primary amines and amino acids, and inductively coupled plasma/mass spectroscopy. All three states are characterized by similar organic chemistries. the marine colloidal state in coastal waters off the Californian coast contains primarily carbohydrates, fatty acids, minor amounts of proteinaceous compounds and electropositive elements including aluminium and iron. Aromatic molecules and olefinic functional groups are in low concentration. the colloidal state differs qualitatively from the particulate and dissolved states. Yet all three could be derived, with degradation, from algal or macroalgal surface components.     

Permeability of Roads to Movement of Scrubland Lizards and Small Mammals

A primary objective of road ecology is to understand and predict how roads affect connectivity of wildlife populations. Road avoidance behavior can fragment populations, whereas lack of road avoidance can result in high mortality due to wildlife‐vehicle collisions. Many small animal species focus their activities to particular microhabitats within their larger habitat. We sought to assess how different types of roads affect the movement of small vertebrates and to explore whether responses to roads may be predictable on the basis of animal life history or microhabitat preferences preferences. We tracked the movements of fluorescently marked animals at 24 sites distributed among 3 road types: low‐use dirt, low‐use secondary paved, and rural 2‐lane highway. Most data we collected were on the San Diego pocket mouse (Chaetodipus fallax), cactus mouse (Peromyscus eremicus), western fence lizard (Sceloporus occidentalis), orange‐throated whiptail (Aspidoscelis hyperythra), Dulzura kangaroo rat (Dipodomys simulans) (dirt, secondary paved), and deer mouse (Peromyscus maniculatus) (highway only). San Diego pocket mice and cactus mice moved onto dirt roads but not onto a low‐use paved road of similar width or onto the highway, indicating they avoid paved road substrate. Both lizard species moved onto the dirt and secondary paved roads but avoided the rural 2‐lane rural highway, indicating they may avoid noise, vibration, or visual disturbance from a steady flow of traffic. Kangaroo rats did not avoid the dirt or secondary paved roads. Overall, dirt and secondary roads were more permeable to species that prefer to forage or bask in open areas of their habitat, rather than under the cover of rocks or shrubs. However, all study species avoided the rural 2‐lane highway. Our results suggest that microhabitat use preferences and road substrate help predict species responses to low‐use roads, but roads with heavy traffic may deter movement of a much wider range of small animal species.     

A new method for high-resolution bivalve growth rate studies in hydrothermal environments

The age and shell growth rate of deep-sea hydrothermal bivalves were investigated for the first time using in situ chemical staining combined with high-resolution micro-increment analysis. A staining chamber developed for this purpose was applied to a patch of Bathymodiolus thermophilus mussels at 2,500 m depth at the 9°47′N vent field on the East Pacific Rise (EPR) in May 2010. This approach minimizes disturbance of the mussels in their habitat. Bathymodiolus thermophilus grows according to a circalunidian rhythm, with one increment formed each day, and displays tide-related growth rate variability. Based on the von Bertalanffy growth rate model, the largest shell collected (SL = 20.5 cm) would be 10.0 year old, with a growth rate of 4.2–1.1 cm year^?1 as the shell ages. This fast growth rate is consistent with the instability of the environment in this section of the EPR and observed recolonization rates and could reflect a specific adaptation of this species.