Application of fluorescence in situ hybridization technique to detect simazine-degrading bacteria in soil samples

We propose a new approach to evaluate the natural attenuation capacity of soil by using fluorescence in situ hybridization (FISH). A specific oligonucleotide probe AtzB1 was designed based on the sequence data of the atzB gene involved in the hydrolytic deamination of s-triazines; this gene, located in a multiple copy plasmid was detected by the optimized FISH protocol. Two agricultural soils (Lodi and Henares) with a history of simazine treatments, and two natural soils (Soto and Monza), without previous exposure to simazine, were studied. AtzB1 probe-target cells were found only in the agricultural soils and, in a greater percentage, in the Lodi soil, compared to the Henares one. Moreover, the greatest percentage of AtzB1 probe-target cells in Lodi was accompanied by a greater mineralization rate, compared to the Henares soil. The FISH method used in this study was suitable for the detection of simazine-degrading bacteria and could be a useful indicator of the potential of soil bioremediation.     

Application of Brassica napus hairy root cultures for phenol removal from aqueous solutions

Phenolic compounds present in the drainage from several industries are harmful pollutants and represent a potential danger to human health. In this work we have studied the removal of phenol from water using Brassica napus hairy roots as a source of enzymes, such as peroxidases, which were able to oxidise phenol. These hairy roots were investigated for their tolerance to highly toxic concentrations of phenol and for the involvement of their peroxidase isoenzymes in the removal of phenol. Roots grew normally in medium containing phenol in concentrations not exceeding 100 mg l(-1), without the addition of H(2)O(2). However, roots were able to remove phenol concentrations up to 500 mg l(-1), in the presence of H(2)O(2), reaching high removal efficiency, within 1h of treatment and over a wide range of pH (4-9). Hairy roots could be re-used, at least, for three to four consecutive cycles. Peroxidase activity gradually decreased to approximately 20% of the control, at the fifth cycle. Basic and near neutral isoenzymes (BNP) decreased along time of recycling while acidic isoenzymes (AP) remained without changes. Although both group of isoenzymes would be involved in phenol removal, AP showed higher affinity and catalytic efficiency for phenol as substrate than BNP. In addition, AP retained more activity than BNP after phenol treatment. Thus, AP appears to be a promising isoenzyme for phenol removal and for application in continuous treatments. Furthermore, enzyme isolation might not be necessary and the entire hairy roots, might constitute less expensive enzymatic systems for decontamination processes.     

Mercury Pollution in the Surface Environment of a Volcanic Area

The mercury content has been determined in samples of fumarolic gases, phreatic waters, soil and vegetation collected at Vulcano, Aeolian Islands, Italy. Volcanic activity is demonstrated as a source of natural mercury pollution whose extent has been evaluated here by studying the contribution of different components of the surface environment. The possible influences for living organisms are examined.     

Study of the organic matter evolution during municipal solid waste composting aimed at identifying suitable parameters for the evaluation of compost maturity

In this work the composting process of municipal solid wastes was studied in order to characterize the transformations of organic matter, particularly humic acid (HA). A composting process, lasting three months, was monitored by chemical methods; the following parameters were measured: water-soluble carbon concentration (WSC) and humic substances content (humic and fulvic acid (FA)). The effects of humification on the molecular structure of humic acid (HA) were also evaluated by Fourier transform infrared (FT-IR) and (13)C NMR spectroscopy. WSC concentration rapidly increased reaching a maximum at day-14 of the composting process and then declined. The humic and fulvic acid content (HA and FA, respectively) slightly increased during the process. The FT-IR and (13)C NMR spectra of HA indicate a high rate of change in structure during composting. The groups containing aromatic and carboxylic C increased, while polysaccharides and other aliphatic structures degraded during composting, resulting in HA structures of higher aromaticity. Therefore, spectrometric measurements could provide information significantly correlated to conventional chemical parameters of compost maturity.     

Benthic invertebrates structure in wetlands of a tributary of the middle Parana River (Argentina) affected by hydrologic and anthropogenic disturbances

The present study was aimed at analyzing chromium concentrations in water column and bottom sediments in the main channel of Northern Salado River (tributary of Middle Parana River) and its floodplain. The main changes caused by human activities and hydrological disturbances on benthic invertebrate structure were also analyzed. Sediment concentrations of the reference area varied between 44.2 and 97.1 microg Crg(-1) (dw), and in the impacted zone, between 85.5 and 209 microg Cr g(-1) (dw) reaching the highest values in the wetland floodplain. Alfa, beta and gamma diversities in the reference section have been 33, 9 and 66 species, and in the disturbed section, they have been 37, 8.33 and 74 species, respectively The species dominant in the disturbed habitats were characterized by a small body size and short life cycles, as the species of olig chaetes Naidinae. The extreme flooding produced a rejuvenation of the area with the consequent physical re-structuration produced by flooding, showing: a marked decrease in chromium levels in sediments and in organic matter content, which allowed the colonization of insects (Ephemeroptera and Trichoptera).     

A novel survey of raptor collections in Europe and their potential to provide samples for pan-European contaminant monitoring

Environmental Science and Pollution Research - This paper provides a novel survey of current collections of frozen raptor carcasses and tissue samples in natural history museums (NHMs),...     

River Channel Geometry and Rating Curve Estimation Using Height above the Nearest Drainage

River channel geometry is an important input to hydraulic and hydrologic models. Traditional approaches to quantify river geometry have involved surveyed river cross sections, which cannot be extended to ungaged basins. In this paper, we describe a method for developing a synthetic rating curve to relate flow to water level in a stream reach based on reach‐averaged channel geometry properties developed using the Height above Nearest Drainage (HAND) method. HAND uses a digital elevation model (DEM) of the terrain and computes the elevation difference between each land surface cell and the stream bed cell to which it drains. Taking increments in water level in the stream, HAND defines the inundation zone and a water depth grid within this zone, and the channel characteristics are defined from this water depth grid. We apply our method to the Blanco River (Texas) and the Tar River (North Carolina) using 10‐m terrain data from the United States Geological Survey (USGS) 3D Elevation Program (3DEP) dataset. We evaluate the method's performance by comparing the reach‐average stage‐river geometry relationships and rating curves to those from calibrated Hydrologic Engineering Center's River Analysis System (HEC‐RAS) models and USGS gage observations. The results demonstrate that after some adjustment, the river geometry information and rating curves derived from HAND using national‐coverage datasets are comparable to those obtained from hydraulic models or gage measurements. We evaluate the inundation extent and show our approach is able to capture the majority of the Federal Emergency Management Agency (FEMA) 100‐year floodplain.     

Treatment of industrial landfill leachate by means of evaporation and reverse osmosis

In this paper a process for the treatment of landfill leachate involving evaporation and reverse osmosis was proposed. Experimental tests were performed on an industrial landfill leachate. The leachate was subjected to evaporation so as to obtain a distillate containing a small amount of organic material and a substantial amount of inorganic substances (consisting primarily of metals and ammonium salts). The distillate of the evaporation treatment was then subjected to reverse osmosis. The reverie osmosis tests were performed using two different membranes: the AD membrane (thin two-ply film of polyamide) and the SC membrane (thin three-ply film of polyamide). Tests carried out at different values of pH showed a reduction of organic content of about 88% when AD membranes were used and about 80% with SC membranes independently of pH. As regards ammonium, comparable reductions of over 97% were registered for both types of membrane in the optimal conditions of pH = 6.4 (97.1% for AD membranes and 97.7% for SC).     

Bioaccessibility of metals in soils: comparison between chemical extractions and in vitro tests

It is well-known that the total metal content in soils is not a good indicator of their harmful effects, leading to an overestimation of risks. Toxicological and environmental hazards depend on the chemical species and on its bioavailability to target organisms. Because a good estimation of bioavailability is difficult, a good compromise is to assess bioaccessibility, defined as the maximum amount of a pollutant which is potentially absorbable by a target organism. This study presents a comparison of different strategies to measure metal bioaccessibility in soils. Three procedures were applied to real soil samples with different levels of metal contamination: pseudo-total metal attack, selective sequential extractions and in vitro tests (deliberately developed to simulate human or mammals digestion). Considering the first step of the selective extraction procedure, which can provide the bioaccessible fraction for deposit-feeder organisms, data obtained for each metal were lower than those obtained from in vitro tests. Therefore, it is possible to highlight that this extraction tends to underestimate metal bioaccessibility in soils for humans, while in vitro tests certainly will overestimate bioaccessibility for organisms as invertebrates. If the sum of first and second step of sequential procedure is considered, results are quite similar to those obtained from in vitro tests, but this kind of procedure would require two days of work rather than a few hours required to perform an in vitro test. Results highlight the diversity among the differently defined bioaccessible fractions and the need to apply the most suitable procedure depending on the target organism.