Purification and Properties of Extracellular Poly(3-hydroxybutyrate) Depolymerase Produced by <Emphasis Type="Italic">Aspergillus fumigatus</Emphasis> 202

An extracellular poly(3-hydroxybutyrate) (PHB) depolymerase produced by a thermotolerant fungal soil isolate, Aspergillus fumigatus 202, was purified and characterized. Maximum PHB depolymerase production was obtained at the end of 48 h with initial medium pH 7.0 and 45 °C in Bushnell Haas Minerals medium containing PHB as sole source of carbon. The PHB depolymerase was purified using size exclusion chromatography to a fold purification of 20.62 and 61.62% yield. SDS-PAGE and isoelectric focusing revealed the molecular weight and pI of the purified enzyme as 63,744 Da and 4.2, respectively. N-terminal amino acid sequence of purified enzyme was HAXDAYLVK. This non-glycosylated enzyme was most active at pH 9.0 and 45 °C. Purified enzyme was inactivated by N-bromosuccinimide and dithiothreitol suggesting the involvement of tryptophan residues and disulfide bonds at its active site. Nonionic detergents like Tween 20, Tween 80 and Triton X-100 inhibited the enzyme activity. Ions like Ca⁺² and Mg⁺² (5 mM) increased the enzyme activity 1.5 times. Fe⁺² effectively inhibited the enzyme activity to 88% whereas Hg⁺² completely inhibited the enzyme.     

Effects of acetaminophen in <Emphasis Type="Italic">Brassica juncea</Emphasis> L. Czern.: investigation of uptake,translocation, detoxification,and the induced defense pathways

Purpose  

Besides classical organic pollutants and pesticides, pharmaceuticals and their residues have nowadays become recognized as relevant environmental contaminants. The risks of these chemicals for aquatic ecosystems are well known, but information about the pharmaca-plant interactions and metabolic pathways is scarce. Therefore, we investigate the process of uptake of acetaminophen (N-Acetyl-4-aminophenol) by Brassica juncea, drug-induced defense responses and detoxification mechanisms in different plant parts.     

How life history contributes to stress response in the Manila clam <Emphasis Type="Italic">Ruditapes philippinarum</Emphasis>

Introduction  

Within the last decade, numerous studies have investigated the role of environmental history on tolerance to stress of many organisms. This study aims to assess if Manila clams Ruditapes philippinarum may react differently to cadmium exposure and trematode parasite infection (Himasthla elongata) depending on their origin and environmental history in Arcachon Bay (France).     

Dealing with disjunct concentration measurements in eddy covariance applications: A comparison of available approaches

Using proton transfer reaction mass spectrometry equipped with a quadrupol mass analyser to quantify the biosphere-atmosphere exchange of volatile organic compounds (VOC), concentrations of different VOC are measured sequentially. Depending on how many VOC species are targeted and their respective integration times, each VOC is measured at repeat rates on the order of a few seconds. This represents an order of magnitude longer sample interval compared to the standard eddy covariance (EC) method (5–20 Hz sampling rates). Here we simulate the effect of disjunct sampling on EC flux estimates by decreasing the time resolution of CO₂ and H₂O concentrations measured at 20 Hz above a temperate mountain grassland in the Austrian Alps. Fluxes for one month are calculated with the standard EC method and compared to fluxes calculated based on the disjunct data (1, 3 and 5 s sampling rates) using the following approaches: i) imputation of missing concentrations based on the nearest neighbouring samples (iDEC_nn), ii) imputation by linear interpolation (iDEC_li), and iii) virtual disjunct EC (vDEC), i.e. flux calculation based solely on the disjunct concentrations. It is shown that the two imputation methods result in additional low-pass filtering, longer lag times (as determined with the maximum cross-correlation method) and a flux loss of 3–30% as compared to the standard EC method. A novel procedure, based on a transfer function approach, which specifically corrects for the effect of data treatment, was developed, resulting in improved correspondence (to within 2%). The vDEC method yields fluxes which approximate the true (20 Hz) fluxes to within 3–7% and it is this approach we recommend because it involves no additional empirical corrections. The only drawback of the vDEC method is the noisy nature of the cross-correlations, which poses problems with lag determination – practical approaches to overcome this limitation are discussed.     

Drought frequency in the Volta Basin of West Africa

According to various reports, climate change is responsible for the change in rainfall amount and pattern accompanied by the various degrees of extreme events in Sahelian West Africa in recent years. Other reports also suggest that there has been a “recovery” of the rainy season (Nicholson 2005). In this study, temporal characteristics of meteorological droughts in the Volta basin, a semi-arid region in West Africa, are investigated in order to provide a guide for sustainable water resource management. For this purpose, drought intensity, areal extent and recurrence frequency is analysed using the standardised precipitation index (SPI) for a time series between 1961 and 2005 from 52 meteorology stations across the Volta basin. Using this analysis the severity of the historical droughts of 1961, 1970, 1983, 1992 and 2001 that occurred in the region are assessed and their intensity, areal extent and return periods are obtained. The drought intensity is lower than −2.0 over nearly 75% of the region, meaning that a major part of the region was under extreme drought conditions during this year. The drought of 1983/1984 has a probability of occurrence of up to 0.1 from records spanning 44 years. The areal extent of extreme drought conditions is about 90% during this drought period.     

Towards institutional analysis of sustainability science: a quantitative examination of the patterns of research collaboration

This paper examines quantitatively the patterns of collaboration over geographical boundaries in the emerging field of sustainability science by empirically analyzing the bibliometric data of scientific articles. The results indicate that an increasing number of countries are engaged in research on sustainability, with the proportion of articles published through international collaboration rising as well. The number of countries engaged in international collaboration on sustainability research has been increasing, and the diversity of countries engaged in research collaboration beyond national borders is also increasing. The geographical patterns of collaboration on sustainability show that research collaboration tends to be conducted between countries which are geographically located closely, suggesting that communication and information exchange might be limited within the regional clusters. The focused fields of research activities on sustainability are significantly different between countries, as each country has its focused fields of research related to sustainability. The specialization of research activities is also observed in international collaboration. While these patterns of international collaboration within regional clusters focusing on specific fields could be effective in promoting the creation, transmission, and sharing of knowledge on sustainability utilizing the already existing regional networks, they could pose a serious obstacle to collecting, exchanging, and integrating diverse types of knowledge, especially when it is necessary to deal with problems involving large-scale complex interactions with long-term implications, such as climate change. It would be of critical importance to establish inter-regional linkages by devising appropriate institutional arrangements for global research collaboration on sustainability science.     

High and low value fish chains in the Mekong Delta: challenges for livelihoods and governance

This paper investigates the structure, function and wealth distribution within the Pangasius hypophthalmus and Henicorhynchus spp./Labiobarbus spp. value chains in the Mekong Delta of Vietnam. The analysis is driven by key questions relating to the form and function of value chains, their contribution to the livelihoods of farmers and fishers, the effectiveness of government policy and the potential for value chain governance mechanisms, such as contracts and certification, to steer towards sustainable production. The results indicate that actors in the high value Pangasius hypopthalmus export chain have a higher potential income, but face considerably higher economic vulnerability from global markets. Alternatively, Henichorhychus/Labiobarbus spp. fishers are severely constrained in their ability to negotiate higher prices for their fish but appear to be less vulnerable to economic and environmental change. The paper concludes that for value chain governance to improve the livelihoods of fishers and farmers in both high and low value chains, new arrangements are needed that better accommodate customary institutions and informal market relations.     

Do EU pesticide standards promote environmentally-friendly production of fresh export vegetables in developing countries? The evidence from Kenyan green bean industry

Developed countries are major markets for developing country fresh produce. Demand by developed country consumers for spotless produce has encouraged developing country consumers to rely increasingly on pesticides in producing fresh export vegetables. However developed country pesticide standards enacted in response to reports of increased farmer and farm worker pesticide poisoning and the food safety scandals of the 1980s and 1990s require changes in the way growers use pesticides. The EU has especially developed stringent food safety standards relating to, among other things, pesticide usage. Under EU pesticide standards (EU-PS) farmers are trained by their buyers on safe use of pesticides and then closely monitored under contract. This paper looks at the impact of these standards on developing country farmers’ use of alternative pest management practices, pesticide protective clothing and the actual usage of pesticides. It finds that compliance with EU-PS increases the use of alternative pest management practices and protective clothing. However, EU-PS has mixed effect on the quantity of pesticides used. The paper also finds that farmer’s education and access to information play an important role in the use of alternative pest management practices. The paper concludes that EU-PS encourage the use of alternative pest management practices and pesticide protective gear in production of fresh export vegetables. The findings imply that EU-PS promote environmentally-friendly methods of production of fresh export vegetables in developing countries.     

Increasing the sustainability of a resource development: Aboriginal engagement and negotiated agreements

While the role Aboriginal people play in environmental governance programs are often underpinned by the Crown, Aboriginal peoples are ratifying negotiated agreements with mining proponents to ensure their issues and concerns are addressed. This paper examines Aboriginal participation in mine development to show how more inclusive social and environmental development models can support a more sustainable development. Through two complementary processes, negotiated agreements and environmental impact assessment, Aboriginal peoples are maximizing their benefits and minimizing the adverse impacts of a project to create a more sustainable resource development. Case study analysis of the Galore Creek Project in northwestern British Columbia, Canada, illustrates how environmental impact assessment and negotiated agreements can co-exist to positively contribute to a successful mineral development, and hence operationalize sustainability within this context.