Predicting fish diet composition using a bagged classification tree approach: a case study using yellowfin tuna (<Emphasis Type="Italic">Thunnus albacares</Emphasis>)

We provided a classification tree modeling framework for investigating complex feeding relationships and illustrated the method using stomach contents data for yellowfin tuna (Thunnus albacares) collected by longline fishing gear deployed off eastern Australia between 1992 and 2006. The non-parametric method is both exploratory and predictive, can be applied to varying size datasets and therefore is not restricted to a minimum sample size. The method uses a bootstrap approach to provide standard errors of predicted prey proportions, variable importance measures to highlight important variables and partial dependence plots to explore the relationships between explanatory variables and predicted prey composition. Our results supported previous studies of yellowfin tuna feeding ecology in the region. However, the method provided a number of novel insights. For example, significant differences were noted in the prey of yellowfin tuna sampled north of 20°S in summer where oligotrophic waters dominate. The analysis also identified that sea-surface temperature, latitude and yellowfin size were the most important variables associated with dietary differences. The methodology is appropriate for delineating ecosystem-level trophic dynamics, as it can easily incorporate large datasets comprising multiple predators to explore trophic interactions among members of a community. Broad-scale relationships among explanatory variables (environmental, biological, temporal and spatial) and prey composition elucidated by this method then serve to focus and lend validity to subsequent fine-scale analyses of important parameters using standard diet methods and chemical tracers such as stable isotopes.     

Enhancement of AhR-mediated activity of selected pollutants and their mixtures after interaction with dissolved organic matter

Dissolved organic matter (DOM) in freshwaters is present at concentrations ranging from 0.5 to 50 mg L?1, and consists of various organic compounds, including humic substances (HS). HS exert a variety of direct and indirect biological effects, including interaction with the aryl hydrocarbon receptor (AhR). AhR is a cytosolic receptor that binds various hydrophobic organic compounds (HOCs) and mediates some of their toxic effects. In vitro effects of binary mixtures of various DOM (mainly HS) with various HOCs on AhR-mediated responses were studied by use of H4IIE-luc cells. Six out of 12 DOM activated the AhR even at environmentally relevant concentrations (17 mg L?1). In simultaneous exposures of H4IIE-luc cells to DOM (17 mg L?1) and each of the model compounds, 2,3,7,8-TCDD, PCB126, PCB169, benzo[a]pyrene, benzo[a]anthracene, dibenz[a,h]anthracene, fluoranthene, a mixture of persistent organic pollutants (POPs), a mixture of polycyclic aromatic hydrocarbons (PAHs), and a mixture of all HOCs, either significant additive or facilitative effects were observed when compared to activities of single HOCs. No significant decrease of effects due to possible sorption of HOCs to DOM was observed, even in subsequent experiments when HOCs+DOM mixtures were preincubated for six days before exposure to H4IIE-luc. Thus, DOM does not seem to protect organisms against AhR-mediated toxic effects of HOCs (as usually predicted due to sorption of HOCs on DOM), but it can actually enhance their potency for AhR-mediated effects in some situations.     

Sea ice and primary production proxies in surface sediments from a High Arctic Greenland fjord: Spatial distribution and implications for palaeoenvironmental studies

In order to establish a baseline for proxy-based reconstructions for the Young Sound–Tyrolerfjord system (Northeast Greenland), we analysed the spatial distribution of primary production and sea ice proxies in surface sediments from the fjord, against monitoring data from the Greenland Ecosystem Monitoring Programme. Clear spatial gradients in organic carbon and biogenic silica contents reflected marine influence, nutrient availability and river-induced turbidity, in good agreement with in situ measurements. The sea ice proxy IP₂₅ was detected at all sites but at low concentrations, indicating that IP₂₅ records from fjords need to be carefully considered and not directly compared to marine settings. The sea ice-associated biomarker HBI III revealed an open-water signature, with highest concentrations near the mid-July ice edge. This proxy evaluation is an important step towards reliable palaeoenvironmental reconstructions that will, ultimately, contribute to better predictions for this High Arctic ecosystem in a warming climate.     

Climate-Smart Design for Ecosystem Management: A Test Application for Coral Reefs

Environmental Management - The interactive and cumulative impacts of climate change on natural resources such as coral reefs present numerous challenges for conservation planning and management....     

Ethical Discourse on the Use of Genetically Modified Crops: A Review of Academic Publications in the Fields of Ecology and Environmental Ethics

The use of genetically modified plants in agriculture (GM crops) is controversially discussed in academic publications. Important issues are whether the release of GM crops is beneficial or harmful for the environment and therefore acceptable, and whether the modification of plants is ethically permissible per se. This study provides a comprehensive overview of the moral reasoning on the use of GM crops expressed in academic publications from 1975 to 2008. Environmental ethical aspects in the publications were investigated. Overall, 113 articles from 15 ecology, environmental ethics, and multidisciplinary science journals were systematically reviewed. Three types of moral concerns were used to structure the normative statements, moral notions, and moral issues found in the articles: concerns addressing consequences of the use of GM crops, concerns addressing the act (the technique itself), and concerns addressing the virtues of an actor. Articles addressing consequences (84%) dealt with general ecological and risk concerns or discussed specific ecological issues about the use of GM crops. Articles addressing the act (57%) dealt with the value of naturalness, the value of biotic entities, and conceptual reductionism, whereas articles addressing the actor (43%) dealt with virtues related to the handling of risks and the application of GM crops. The results of this study may help to structure the academic debate and contribute to a better understanding of moral concerns that are associated with the key aspects of the ethical theories of consequentialism, deontology, and virtue ethics.     

Reproductive functions of wild fish as bioindicators of reproductive toxicants in the aquatic environment

Background, aim, and scope  

Impacts on the reproductive health of wild fish are thought to be suitable early-warning tools indicating contamination of surface waters with endocrine-disrupting compounds. Ecotoxicological assessment of these field observations depends on the availability of reliable biomarkers to enable a discrimination of natural variations of reproductive functions from anthropogenic impacts.     

Recognizing Indigenous peoples’ and local communities’ rights and agency in the post-2020 Biodiversity Agenda

The Convention on Biological Diversity is defining the goals that will frame future global biodiversity policy in a context of rapid biodiversity decline and under pressure to make transformative change. Drawing on the work of Indigenous and non-Indigenous scholars, we argue that transformative change requires the foregrounding of Indigenous peoples’ and local communities’ rights and agency in biodiversity policy. We support this argument with four key points. First, Indigenous peoples and local communities hold knowledge essential for setting realistic and effective biodiversity targets that simultaneously improve local livelihoods. Second, Indigenous peoples’ conceptualizations of nature sustain and manifest CBD’s 2050 vision of “Living in harmony with nature.” Third, Indigenous peoples’ and local communities’ participation in biodiversity policy contributes to the recognition of human and Indigenous peoples’ rights. And fourth, engagement in biodiversity policy is essential for Indigenous peoples and local communities to be able to exercise their recognized rights to territories and resources.     

Toxicity, uptake and metabolism of 4-n-nonylphenol in root cultures and intact plants under septic and aseptic conditions

4-Nonylphenol, a compound with estrogenic activity, has been shown to occur in sewage sludges and effluents of sludge treatment. This, as well as its use in the formulation of pesticides, may result in the contamination of crop plants and may therefore have an impact on the quality of food or feedstuff. The toxicity, uptake and metabolism of 4-n-nonylphenol (4-n-NP) were investigated as¹⁴C-labeled 4-n-NP in root cultures under septical and aseptical conditions and with intact plants grown in containers with soil and aseptically grown in nutrient media. 4-n-NP was toxic to all plant systems tested. The presence of microorganisms and the developmental state of the plant material appeared to have an influence on the EC₅₀ values. 4-n-NP was taken up by the roots and a metabolism to polar compounds was observed in the cases where sufficiently high uptake rates. With intact plants a transport from roots to the shoots was evident. Metabolism in roots changed quantitatively in the presence of microorganisms. The mineralization of 4-n-NP to₁₄CO₂ only occurred with microorganisms.     

PCDD/F and dioxin-like PCB in human blood and milk from German mothers

Blood samples of pregnant women aged between 19 and 42 years at the time they gave birth and milk samples from the same women following delivery were collected between September 2000 and January 2003 from 169 participants living in an industrialized area of Germany (Duisburg birth cohort study). All samples were analyzed for their content of polychlorinated dibenzo-p-dioxins and dibenzofurans (PCDD/F) as well as dioxin-like and indicator polychlorinated biphenyls (PCB). Levels of WHO-TEq were in the range of 4.34-97.3 pg/g(lipid base) (median: 26.37, arithmetic mean: 28.36) for blood, or 3.01-78.7 pg/g(lipid base) (median: 26.40, arithmetic mean: 27.27) for milk, respectively. The four congeners 12378-PeCDD, 23478-PeCDF, 33'44'5-PeCB (# 126) and 233'44'5-HxCB (# 156) contribute the main share to total WHO-TEq. The contribution of PCDD/F in relation to PCB to total WHO-TEq was 60:40% in blood and 52:48% in milk. Good correlations of the contaminant levels in lipid base between both matrices were found. The distribution between blood and milk depends on the molecular weight of the substances. Higher chlorinated PCDD/F- and PCB-congeners were found in 2-4-fold higher concentrations in blood in relation to milk and the concentrations of lower chlorinated PCB-congeners were up to 2-fold higher in milk in relation to blood. The body burden of PCDD/F and PCB increases with age and decreases over the total nursing period. Women who had lived outside highly industrialized countries showed lower concentrations of PCDD/F and PCB. In some cases, elevated levels of PCB were observed when the women had previously lived in Eastern Europe for a long time. In comparison with recent data, the decline in human PCDD/F and PCB levels observed during the nineties seems to have stopped. The individual exposures of the infants due to breastfeeding within the first 18 months were calculated to be from 4.4 to 318 ng WHO-TEq (median: 106, arithmetic mean: 118). The actual mean daily exposure of a breastfed infant can be estimated to 131 pg WHO-TEq/kg(body weight).