University of Benin water supply system: Microbiological and physico-chemical assessments

The microbiological and physico-chemical characteristics of the drinking water supplied by the Central Borehole at the University of Benin, Ugbowo Campus were investigated. The investigation entailed assessment of the pH, turbidity, total suspended solids, total dissolved solids, dissolved oxygen, temperature, salinity, conductivity, nitrate, nitrite, phosphate, sulphate, chloride, N-nitroso compounds, cadmium, chromium, nickel, lead, zinc, manganese, iron, coliform count, BOD₅ and COD of the water at the Central Borehole and at ten residential quarters. The assessment indicated that the water was fit for drinking and other domestic applications. Results were also compared with WHO, EU and Nigeria FEPA standards. The results showed that the pH values of the water (5.01–5.86) and total coliform count (1–2/100 ml) expressed as MPN were outside the limits set by the WHO, EU and FEPA. The data also showed that the other water quality parameters assessed were within WHO, EU and FEPA permissible limits. The results of ANOVA showed that significant changes occurred during distribution.     

Metal contamination of surface water,sediment and <Emphasis Type="Italic">Tympanotonus fuscatus</Emphasis> var. <Emphasis Type="Italic">radula</Emphasis> of Iko River and environmental impact due to Utapete gas flare station,Nigeria

Inter-seasonal studies on the trace metal load of surface water, sediment and Tympanotonus fuscatus var. radula of Iko River were conducted between 2003 and 2004. The impact of anthropogenic activities especially industrial effluent, petroleum related wastes, gas flare and episodic oil spills on the ecosystem are remarkable. Trace metals analyzed included cadmium (Cd), chromium (Cr), copper (Cu), iron (Fe), lead (Pb), manganese (Mn), nickel (Ni), vanadium (V) and zinc (Zn). Sediment particle size analysis revealed that they were characteristically psammitic and were predominantly of medium to fine grained sand (>73%), less of silt (<15%) and clay (<10%). These results correlated with low levels of trace elements such as Pb (0.03 ± 0.02 mg kg⁻¹), Cr (0.22 ± 0.12 mg kg⁻¹), Cd (0.05 ± 0.03 mg kg⁻¹), Cu (0.04 ± 0.02 mg kg⁻¹) and Mn (0.23 ± 0.22 mg kg⁻¹) in the sediment samples. This observation is consistent with the scarcity of clayey materials known to be good scavengers for metallic and organic contaminants. Sediments indicated enhanced concentration of Fe, Ni and V, while other metal levels were relatively low. The concentrations of all the metals except Pb in surface water were within the permissible levels, suggesting that the petroleum contaminants had minimal effect on the state of pollution by trace metals in Iko River. Notably, the pollutant concentrations in the sediments were markedly higher than the corresponding concentrations in surface water and T. fuscatus tissues, and decreased with distance from point sources of pollution.     

A study on the orbit of air temperature movement

In this paper, we describe an air temperature movement by mapping its time series to the polar coordinates: the value of the time series is plotted on the radial coordinate and the time on the angular coordinate. In this way, both the yearly and daily air temperature movements from five different locations of China are used to demonstrate that, in an intuitionistic view, air temperature movement is neither random nor chaotic, but has its own orbit. We then propose an elliptic orbit model for the air temperature movement. Our proposed model provides quite good results when it is applied to the evaluation of yearly air temperature movements in eight locations in various parts of the world, and the evaluation of daily air temperature movements in five locations in Hunan Province of China on December 17, 2005. Results show that our approach provides a concise and helpful model for air temperature analysis.     

A Tool for Classification and Regression Using Random Forest Methodology: Applications to Landslide Susceptibility Mapping and Soil Thickness Modeling

Classification and regression problems are a central issue in geosciences. In this paper, we present Classification and Regression Treebagger (ClaReT), a tool for classification and regression based on the random forest (RF) technique. ClaReT is developed in Matlab and has a simple graphic user interface (GUI) that simplifies the model implementation process, allows the standardization of the method, and makes the classification and regression process reproducible. This tool performs automatically the feature selection based on a quantitative criterion and allows testing a large number of explanatory variables. First, it ranks and displays the parameter importance; then, it selects the optimal configuration of explanatory variables; finally, it performs the classification or regression for an entire dataset. It can also provide an evaluation of the results in terms of misclassification error or root mean squared error. We tested the applicability of ClaReT in two case studies. In the first one, we used ClaReT in classification mode to identify the better subset of landslide conditioning variables (LCVs) and to obtain a landslide susceptibility map (LSM) of the Arno river basin (Italy). In the second case study, we used ClaReT in regression mode to produce a soil thickness map of the Terzona catchment, a small sub-basin of the Arno river basin. In both cases, we performed a validation of the results and a comparison with other state-of-the-art techniques. We found that ClaReT produced better results, with a more straightforward and easy application and could be used as a valuable tool to assess the importance of the variables involved in the modeling.     

Seabird use of discards from a nearshore shrimp fishery in the South Atlantic Bight,USA

Shrimp trawling is common throughout the southeastern and Gulf of Mexico coasts of the USA and is the primary contributor to fisheries discards in these regions. Tens of thousands of nearshore seabirds nest near shrimp trawling grounds in the USA, but to date, there has been no assessment of the relationship between seabirds and shrimp trawlers. We examined the taxonomic composition of bycatch, rate at which seabirds scavenged bycatch, and energy density of discarded bycatch in a nearshore commercial shrimp fishery. Bycatch was primarily comprised of demersal fish that are not typically accessible to the plunge-diving and surface-feeding seabirds that occur in the area. Hence, seabird diets in the region appear to be broadened taxonomically by the availability of discards. Results from discard experiments indicated that 70% of the nearly 5,500 items discarded by hand were scavenged by seabirds and that the fate of a discarded item was most strongly predicted by its taxonomic order. Laughing gulls scavenged the greatest proportion of discards, although brown pelicans were the only species to scavenge more discards than predicted based upon their abundance. Because this is the first such study in the region, it is difficult to ascertain the extent or intensity of the impact that discards have on nearshore seabirds. Nonetheless, our results suggest that it will be difficult for managers to clearly understand fluctuations in local seabird population dynamics without first understanding the extent to which these species rely upon discards. This may be especially problematic in situations where seabird populations are recovering following natural or anthropogenic stressors.     

Relative proportions of <Emphasis Type="Italic">E. coli</Emphasis> and <Emphasis Type="Italic">Enterococcus spp.</Emphasis> may be a good indicator of potential health risks associated with the use of roof harvested rainwater stored in tanks

A total of 285 water samples were collected from 71 roof harvested rainwater tanks from four villages in different provinces over a two-year (2013–2014) period during the early (October to December) and late (January to March) rainy season. Water quality was evaluated based on Escherichia coli, faecal coliforms and Enterococcus spp. prevalence using the IDEXX Quanti-Tray quantification system. Real-Time PCR was used to analyse a subset of 168 samples for the presence of Shigella spp., Salmonella spp. and E. coli virulence genes (stx1, stx2 and eaeA). Escherichia coli were detected in 44.1% of the samples, Enterococcus spp. in 57.9% and faecal coliforms in 95.7%. The most prevalent E. coli concentrations in harvested rainwater were observed in 29.1% of samples and 22.5% for Enterococcus spp. and, were within 1–10 cfu/100 ml and 10–100 cfu/100 ml, respectively, whereas those for faecal coliforms (36.6%) were within 100–1000 cfu/100 ml. On average 16.8% of the samples had neither E. coli nor Enterococcus spp. detected, while 33.9% had only Enterococcus spp. and 23.7% had only E. coli. E. coli and Enterococcus spp. were detected together in 25.5% of the samples. Evaluation of samples for potential pathogenic bacteria showed all tested samples to be negative for the Shigella spp. ipaH gene, while five tested positive for Salmonella ipaB gene. None of the samples tested positive for the stx1 and stx2 genes, and only two tested positive for the eaeA gene. These findings are potentially useful in the development of a simplified risk assessment strategy based on the concentrations of indicator bacteria.     

Epiphytic Algae and Lichen Cover in Boreal Forests—A Long-Term Study Along a N and S Deposition Gradient in Sweden

The aim was to describe spatiotemporal patterns of colonization of spruce branches by algae and lichens and the relationship with decreasing deposition of N and S. Coverage was estimated annually over 10 years for four Swedish Integrated Monitoring catchments with varying deposition levels. Initial hypotheses were that algal coverage would be positively correlated with deposition and that lichen coverage would be negatively correlated with S and positively with N deposition. Data were analyzed using regression, ANOVA, and partial least square regression. The results showed a temporal decrease in the coverage of algae but an increase in colonization rates, while lichens showed less uniform patterns. Within catchments, algae and lichen coverages were positively correlated with mainly S deposition. Across catchments, coverage of algae increased, while the coverage of lichens decreased with increasing N and S deposition. Colonization rates of both algae and lichens showed weak correlations with both spatial and temporal trends in N and S deposition. Thus, while N and S deposition had an effect on the colonization and coverage of algae and lichens, other factors are also important.     

Nitrogen dynamics in managed boreal forests: Recent advances and future research directions

Nitrogen (N) availability plays multiple roles in the boreal landscape, as a limiting nutrient to forest growth, determinant of terrestrial biodiversity, and agent of eutrophication in aquatic ecosystems. We review existing research on forest N dynamics in northern landscapes and address the effects of management and environmental change on internal cycling and export. Current research foci include resolving the nutritional importance of different N forms to trees and establishing how tree–mycorrhizal relationships influence N limitation. In addition, understanding how forest responses to external N inputs are mediated by above- and belowground ecosystem compartments remains an important challenge. Finally, forestry generates a mosaic of successional patches in managed forest landscapes, with differing levels of N input, biological demand, and hydrological loss. The balance among these processes influences the temporal patterns of stream water chemistry and the long-term viability of forest growth. Ultimately, managing forests to keep pace with increasing demands for biomass production, while minimizing environmental degradation, will require multi-scale and interdisciplinary perspectives on landscape N dynamics.     

Power matters in closing the phenotyping gap

Much of our understanding of physiology and metabolism is derived from investigating mouse mutants and transgenic mice, and open-access platforms for standardized mouse phenotyping such as the German Mouse Clinic (GMC) are currently viewed as one powerful tool for identifying novel gene-function relationships. Phenotyping or phenotypic screening involves the comparison of wild-type control mice with their mutant or transgenic littermates. In our study, we explored the extent to which standardized phenotyping will succeed in detecting biologically relevant phenotypic differences in mice generated and provided by different collaborators. We analyzed quantitative metabolic data (body mass, energy intake, and energy metabolized) collected at the GMC under the current workflow, and used them for statistical power considerations. Our results demonstrate that there is substantial variability in these parameters among lines of wild-type C57BL/6 (B6) mice from different sources. Given this variable background noise in mice that serve as controls, subtle phenotypes in mutant or transgenic littermates may be overlooked. Furthermore, a phenotype observed in one cohort of a mutant line may not be reproducible (to the same extent) in mice coming from a different environment or supplier. In the light of these constraints, we encourage researchers to incorporate information on intrastrain variability into future study planning, or to perform advanced hierarchical analyses. Both will ultimately improve the detectability of novel phenotypes by phenotypic screening. Carola W. Meyer and Ralf Elvert contributed equally to this work.     

Assessing strategies to mitigate phosphorus leaching from drained clay soils

Assessing mitigation of phosphorus (P) leaching from subsurface drainage systems is challenging due to high spatial and temporal variation in leaching. Mean measured total P leaching from a clayey soil in an eight-year study period (four replicates per treatment) was (kg ha^?1 year^?1): 1.21 from shallow autumn tillage (ShT), 0.84 from unfertilised fallow (UF), 0.81 from conventional autumn ploughing (CT) and 0.57 from structure liming (SL–CT). Treatment was not significant using Richards–Baker flow index or a distance factor as covariate (p = 0.084 and 0.057). A tendency for lower leaching was obtained comparing SL-CT with ShT (p _adjusted = 0.060 and 0.009 respectively). A combination of measures adapted to drainage conditions and clay content in different parts of the field is proposed since P leaching was approximately halved from an adjacent field (4.3 ha) in a three-year post-period compared with a three-year pre-period for structure liming the entire field and drainage system renovation plus structure lime drain backfilling.