Development and Integration of Quantitative Real-Time PCR Methods for Detection of Mitochondrial DNA and Methanobrevibacter smithii nifH Gene as Novel Microbial Source Tracking Tools

A novel microbial source tracking (MST) method based on the detection of human and non-human markers was developed and applied to track the origin of fecal pollution in water systems. Mitochondrial DNA sequences were used to develop new quantitative real-time polymerase chain reaction (qPCR) assays for dog, poultry, and gull. The targets were included as part of a toolbox including human, cow, pig, and sheep assays. A primer and probe set for the detection of the human-specific nifH gene of Methanobrevibacter smithii was also designed as an indicator of human fecal contamination. The assays were tested for specificity and applied to fecal-spiked surface waters and environmental samples collected from two river catchments impacted by sources of human and non-human fecal contamination. The MST methods described were applicable to both spiked waters and environmental samples, and using the two approaches the origin of fecal pollution could be successfully determined in mixed source fecally polluted waters.     

Mining and environmental change in Sierra Leone, West Africa: a remote sensing and hydrogeomorphological study

This paper evaluates the environmental changes in southwestern Sierra Leone, West Africa from rutile (titanium dioxide) between 1967 and 1995. Mining in peripheral parts of the world economy is a consequence of larger global economic interests. Historically, long-distance trade and export production of minerals and other natural resources primarily for the benefit of core countries are responsible for transforming the natural environment and landscapes of peripheral sectors of the world economy. Tracking environmental change in developing countries such as Sierra Leone is challenging because of financial and infrastructural constraints on the use of ground methods of evaluation and monitoring. Remote sensing data are invaluable in assessing the human dimensions of Land Use and Land Cover Change (LULCC) with implications for political ecology. Using available multi-date infrared Landsat images supplemented with field hydrological and biophysical data, we monitored the rapid temporal and spatial dynamic characteristic of mining areas in the study area with a focus on physical changes to the landscape. Reservoir construction for mining has caused flooding of alluvial lowlands, deforestation, and the creation of tailings and stockpiles over mined-out portions of the lease. Although the study was conducted at a local scale, it represents the broad, regional, past-to-present manner by which global economic interests exploit natural resources and impact the environment in distant places.     

Evaluation of Continuous Performance Monitoring Techniques for Hazardous Waste Incinerators

This paper discusses monitoring the waste destruction efficiency of hazardous waste incinerators. The particular problem is to ensure that incinerators do not release, without detection, significant quantities of waste as a result of operating fluctuations or equipment degradation. To detect these conditions, continuous, automated, and real-time source monitoring is required. Detection of degraded performance by monitoring and measuring waste compounds directly is not presently possible on a continuous basis. An alternative is to use commercially available continuous monitors to measure combustion intermediates (e.g., CO or hydrocarbons) and thereby infer waste destruction efficiency. Required, however, is a correlation between the emission of intermediates and the emission of waste. In this paper, the response of a number of these continuous monitors is compared with waste destruction efficiency measurements from a laboratory scale, liquid-spray incinerator operated on fuel oil doped with model waste compounds: benzene, chlorobenzene, acrylonitrile, and chloroform. Total hydrocarbon and CH₄ measurements are found to vary with waste emission in a nearly linear manner; however, a substantial increase in CO emission occurs before a significant amount of waste is released. These results suggest that CO may serve as an indicator of the approach of waste release, while total hydrocarbons may provide an indicator of immediate waste release.     

Relationship Between Self-reported Activity Levels and Actual Heart Rates in Teenagers

A study was designed to explore the relationship between self-reported activity levels and actual heart rate (HR) as measured by a portable heart rate monitor (Sport Tester PE3000).

Twenty-two teenagers (8 boys, 14 girls, median age of 16) from Watertown High School, Massachusetts participated in this pilot study which involved continuous monitoring of HR during normal daily activities and simultaneous completion of a time/activity diary. There were 31 successful monitoring sessions ranging from 1.9 to 17 hours with a median monitoring time of 12.6 hours. Four unsuccessful monitoring sessions were experienced due to equipment failure. Apart from participant cooperation, the single most important factor affecting the feasibility of continuous heart rate monitoring was found to be equipment design. The overall average heart rate observed was 88.4 bpm (SD = 24.3). An individual’s correlation coefficient for perceived activity level (documented in half-hour intervals) and heart rate (averaged over the half-hour intervals) varied from 0.24 to 0.89. More than half of the correlation coefficients were below 0.40. There was a significant difference (P < .0001) between average heart rate for time spent indoors (90 bpm) versus outdoors (103 bpm) even after correcting for sleeping time. It is concluded that continuous HR monitoring with simultaneous completion of a time/activity diary is feasible and is a promising source of information for studies on exposure to air pollutants.     

Adsorption and breakdown of penicillin antibiotic in the presence of titanium oxide nanoparticles in water

The fate and transport of antibiotics in natural water systems is controlled in part by interactions with nanometer (10⁻⁹ m) metal oxide particles. Experiments were performed by mixing solutions of ampicillin (AMP), a common, penicillin-class human and veterinary antibiotic, with 25 nm-TiO₂ (anatase) nanoparticles at different pH conditions. Both sorption and degradation of AMP were observed in the AMP-nanoparticle solutions. For AMP concentrations from ∼3 μM to 2.9 mM the overall AMP removal from solution can be described by linear isotherms with removal coefficients (K_r) of 3028 (±267) L kg⁻¹ at pH 2, 11,533 (±823) L kg⁻¹ at pH 4, 12,712 (±672) L kg⁻¹ at pH 6, and 1941 (±342) L kg⁻¹ at pH 8. Mass spectral analysis of AMP solutions after removal of the solid nanoparticles yielded ions that indicate the presence of peniclloic acid, penilloic acid and related de-ammoniated by-products as possible compounds resulting from the degradation of AMP at the TiO₂ surface.     

Multi-decadal changes in tundra environments and ecosystems: synthesis of the International Polar Year-Back to the Future project (IPY-BTF)

Understanding the responses of tundra systems to global change has global implications. Most tundra regions lack sustained environmental monitoring and one of the only ways to document multi-decadal change is to resample historic research sites. The International Polar Year (IPY) provided a unique opportunity for such research through the Back to the Future (BTF) project (IPY project #512). This article synthesizes the results from 13 papers within this Ambio Special Issue. Abiotic changes include glacial recession in the Altai Mountains, Russia; increased snow depth and hardness, permafrost warming, and increased growing season length in sub-arctic Sweden; drying of ponds in Greenland; increased nutrient availability in Alaskan tundra ponds, and warming at most locations studied. Biotic changes ranged from relatively minor plant community change at two sites in Greenland to moderate change in the Yukon, and to dramatic increases in shrub and tree density on Herschel Island, and in subarctic Sweden. The population of geese tripled at one site in northeast Greenland where biomass in non-grazed plots doubled. A model parameterized using results from a BTF study forecasts substantial declines in all snowbeds and increases in shrub tundra on Niwot Ridge, Colorado over the next century. In general, results support and provide improved capacities for validating experimental manipulation, remote sensing, and modeling studies.     

Influence of plant-earthworm interactions on SOM chemistry and p,p'-DDE bioaccumulation

Laboratory experiments assessed how bioaccumulation of weathered p,p′-DDE from soil and humic acid (HA) chemistry are affected by interactions between the plants Cucurbita pepo ssp. pepo and ssp. ovifera and the earthworms Eisenia fetida, Lumbricus terrestris, and Apporectodea caliginosa. Total organochlorine phytoextraction by ssp. pepo increased at least 25% in the presence of any of the earthworm species (relative to plants grown in isolation). Uptake of the compound by ssp. ovifera was unaffected by earthworms. Plants influenced earthworm bioaccumulation as well. When combined with pepo, p,p′-DDE levels in E. fetida decreased by 50%, whereas, in the presence of ovifera, bioconcentration by L. terrestris increased by more than 2-fold. Spectral analysis indicated a decrease in hydrophobicity of HA in each of the soils in which both pepo and earthworms were present. However, HA chemistry from ovifera treatments was largely unaffected by earthworms. Risk assessments of contaminated soils should account for species interactions, and SOM chemistry may be a useful indictor of pollutant bioaccumulation.     

Relationships Between Major Ownerships, Forest Aboveground Biomass Distributions, and Landscape Dynamics in the New England Region of USA

This study utilizes remote sensing derived forest aboveground biomass (AGB) estimates and ownership information obtained from the Protected Areas Database (PAD), combining landscape analyses and GIS techniques to demonstrate how different ownerships (public, regulated private, and other private) relate to the spatial distribution of AGB in New England states of the USA. “Regulated private” lands were dominated by lands in Maine covered by a Land Use Regulatory Commission. The AGB means between all pairs of the identified ownership categories were significantly different (P < 0.05). Mean AGB observed in public lands (156 Mg/ha) was 43% higher than that in regulated private lands (109 Mg/ha), or 30% higher than that of private lands as a whole. Seventy-seven percent of the regional forests (or about 9,300 km²) with AGB >200 Mg/ha were located outside the area designated in the PAD and concentrated in western MA, southern VT, southwestern NH, and northwestern CT. While relatively unfragmented and high-AGB forests (>200 Mg/ha) accounted for about 8% of total forested land, they were unevenly proportioned among the three major ownership groups across the region: 19.6% of the public land, 0.8% of the regulated private land, and 11.0% of the other private land. Mean disturbance rates (in absolute value) between 1992 and 2001 were 16, 66, and 19 percent, respectively, on public, regulated private, and other private land. This indicates that management practices from different ownerships have a strong impact on dynamic changes of landscape structures and AGB distributions. Our results may provide insight information for policy makers on issues regarding forest carbon management, conservation biology, and biodiversity studies at regional level.     

Successful application of monitored natural attenuation in a surficial aquifer

Groundwater investigations conducted since 1988 at a Tennessee Department of Environment and Conservation (TDEC) Voluntary Oversight and Assistance Program (VOAP) site located in Millington, Tennessee, have defined the lateral and vertical extent of site chemicals of concern (COCs) consisting of tetrachloroethene (PCE), trichloroethene (TCE), and associated degradation products. Results of a groundwater remedial investigation determined that aquifer conditions were favorable for anaerobic degradation of COCs through reductive dechlorination. A subsequent groundwater feasibility study determined that monitored natural attenuation (MNA) coupled with long‐term groundwater monitoring was the most effective and suitable remedial option for the site. A Record of Decision was issued by the TDEC VOAP approving MNA and long‐term groundwater monitoring as the remedial option for the site, a first for such a site in Tennessee involving chlorinated organics. A groundwater fate and transport model (the 1998 model) developed during the RI was used as the basis for the MNA remedy. Analytical data from 1998 to 2008 indicate COCs in former high‐concentration areas continue to degrade at rates consistent with or ahead of the 1998 model predictions. Evidence of reductive dechlorination is also supported by the continued presence of breakdown products—specifically, vinyl chloride and ethene (terminal endpoint of PCE breakdown through reductive dechlorination). The continued detection of breakdown products along the flow‐path wells also confirms the effectiveness of the MNA remedy at the site. Current analytical data indicate that COC plumes beneath the site are not migrating and are actually retracting. © 2010 Wiley Periodicals, Inc.