Nucleic Acid Amplification-Based Methods for Detection of Enteric Viruses: Definition of Controls and Interpretation of Results

The most effective methods for virus detection in food and environmental samples are those based on nucleic acid amplification. Complex methods must be applied by the analyst in order to control for false negative results of virus detection assays in those samples that may be contaminated by virus concentrations above the detection level. The verification of analytical results is a necessity and this depends on using an appropriate suite of controls to monitor the efficacy of the critical steps in the method and allow correct result interpretations to be made. We describe the suite of controls necessary for analysing food and environmental samples for the presence of enteric viruses by nucleic acid amplification-based methods. To exclude false negative and positive interpretations of results, the inclusion of this suite of controls will be essential when considering incorporating monitoring of viruses in food or environmental safety management plans.     

Genetically modified organisms in agriculture: can regulations work?

Genetically modified (GM) crops have been recognised to be economically beneficial to subsistence farmers and have been projected as essential tools for addressing challenges in hunger, environmental sustainability and international development. Yet the uncertainty of their effects on human health and the undesirable ecological consequences of these organisms have raised concerns on the rapid pace of their production. Regulating the release of these organisms is a critical environmental issue. The Cartagena protocol on bio-safety, the principle legal arrangement for the regulation of these organisms, has ratifications from only 157 countries and has proven to be a weak regulator. Countries like India and Brazil have seen the proliferation of unapproved stealth GM varieties which make regulation even more difficult. In this paper, we explore the debate surrounding the introduction of GM organisms and analyse the effectiveness of existing legal regimes to regulate their use.     

Tackling wicked problems and tricky transitions: change and continuity in Cape Town's environmental policy landscape

This paper offers a reflection on 15 years of policy change in the City of Cape Town aimed at fostering sustainability from the perspective of a City practitioner. The persistent continuation of unsustainable outcomes, despite ongoing policy reforms, is understood as a combination of the emergence of wicked problems, within a changing local government mandate, in the absence of a transformation of institutional structures, tools and approaches. While the approach to policy reform in Cape Town has focussed on reducing substantive uncertainty through its knowledge-based approach, we show that in the context of an expanding local government mandate, sustainability becomes an aspect of many departments’ directive resulting in strategic uncertainty. The untransformed traditional line-function-based structure of local government in turn works against integration between departments (fundamental for addressing non-linear wicked problems), thus promoting institutional uncertainty. In addressing this combination of strategic and institutional uncertainty, our findings indicate that integration has to happen in the policy stage in order for sustainability principles to be implemented in relevant departments; that implementation requires resourcing across the institution, and ought to be included in departments’ targets; and that competing and conflicting rationalities underpin the policy–practice gap. It is suggested that a first step in breaking down the strategic and institutional uncertainties would be to foster shared values through creating deliberative spaces within the City in which debate, discussion and learning can occur.     

An Assessment of Changes in Kunzea ericoides var. microflora and Other Hydrothermal Vegetation at the Wairakei–Tauhara Geothermal Field, New Zealand

Hydrothermal ecosystems are of high conservation and scientific value, but they are sensitive to external perturbations that result from development. This study examines the composition of vegetation at four plots at the Wairakei-Tauhara geothermal field, New Zealand, using the Scott height-frequency method, ground temperatures at 0.1- and 1-m depth, soil pH, and photographic surveys. It highlights the response of plant communities, in particular that of Kunzea ericoides var. microflora, in terms of composition, structure, and biomass index values, measures changes in ground temperature, as well as provides baseline data against which to compare future changes. It was found that optimal growing conditions for K. ericoides var. microflora are at temperatures above background conditions with a slightly acidic pH. Plots with cooler, less acidic conditions support more diverse plant communities, which also promote the establishment of invasive species. This suggests that the largest threats to thermotolerant vegetation in New Zealand, including K. ericoides var. microflora, are further decreases in ground temperature because the establishment of invasive species may result in thermolerant vegetation being out-competed in hydrothermal ecosystems. Recognising and understanding the ecological diversity and dynamics of hydrothermal ecosystems, as well as acknowledging the competing interests between development and conservation, is key to the management and protection of these areas.     

When the going gets tough: Employee reactions to large-scale organizational change and the role of employee Machiavellianism

Large-scale, long-term change initiatives take time to unfold, which can be a source of uncertainty and strain. Investigating the initial 19 months of a large-scale change, we argue that during these stages, employees' change-related beliefs become more negative over time, which negatively affects their work engagement and, ultimately, increases their turnover intentions. Furthermore, we investigate the impact of a trait, Machiavellianism, on change reactions and propose that employees high in Machiavellianism react more negatively during change processes as they are especially susceptible to uncertainty and stress. We test our (cross-level) moderated mediation model in a three-wave longitudinal study among employees undergoing a large-scale change (T1: n = 1,602; T2: n = 1,113; T3: n = 759). We find that employees' beliefs about the impact and value of the change are indeed negatively related to change duration and that decreases in these perceptions come with a decline in engagement and increases in turnover intentions. Moreover, employees high in Machiavellianism react more strongly to a deterioration in change-related beliefs, showing stronger reductions in engagement and stronger increases in turnover intentions than employees low in Machiavellianism. Our study offers explanations for the negative effects of large-scale changes including an explanatory factor for disparate employee reactions to change over time.     

Trophic specialisation of metazoan meiofauna at the Håkon Mosby Mud Volcano: fatty acid biomarker isotope evidence

We report the results of a detailed investigation on the trophoecology of two dominant meiofaunal species at the Håkon Mosby Mud Volcano (HMMV), a deep-sea cold methane-venting seep. Analyses of fatty acids (FAs) and their stable carbon isotopes were used to determine the importance of chemosynthetic nutritional pathways for the dominant copepod species (morphologically very similar to Tisbe wilsoni) inhabiting the volcano’s centre and the abundant nematode Halomonhystera disjuncta from the surrounding microbial mats. The strong dominance of bacterial biomarkers (16:1ω7c, 18:1ω7c and 16:1ω8c) coupled with their individual light carbon isotopes signatures (δ¹³C ranging from ?52 to ?81‰) and the lack of symbiotic relationships with prokaryotes (as revealed by molecular analyses and fluorescent in situ hybridisation) indicated that chemosynthetically derived carbon constitutes the main diet of both species. However, the copepod showed a stronger reliance on the utilisation of methanotrophic bacteria and contained polyunsaturated FAs of bacterial origin (20:5ω3 and 22:6ω3 with isotope signatures δ¹³C < ?80‰). Instead, the FA profiles of H. disjuncta suggested that sulphide-oxidising bacteria constituted the main diet of this nematode. Therefore, HMMV can be regarded as a persistent deep-sea cold seep, allowing a chemosynthesis-based trophic specialisation by the dominant meiofaunal species inhabiting its sediments. The present investigation, through the determination of the fatty acid profiles, provides the first evidence for trophic specialisation of meiofauna associated with sub-habitats within a cold seep.     

Simulation of Urban-Scale Air Pollution Patterns in Luxembourg: Contributing Sources and Emission Scenarios

The aim of this study is to investigate the air pollution situation in an urban area in southwestern Luxembourg and to simulate annual NO₂ and PM₁₀ concentrations in response to changes in meteorological conditions and emissions using a Gaussian dispersion model. Simulations are carried out for the years 1998–2006. Emission scenarios related to road transport and nonindustrial combustion are performed in order to predict changes of air pollution levels. Road transport is by far the most important local emission source in the study area. Scenarios with more stringent emission standards for vehicles, less traffic, and fewer heavy-duty vehicles lead to reductions of NO_x and primary PM₁₀ emissions. As a result, the annual NO₂ concentrations are decreasing in most parts of the study area and are below the European annual limit value of 40 μg?m^?3. In contrast, a scenario with increased use of wood pellets for domestic heating shows an increase in urban PM₁₀ concentration. The year-to-year variability of meteorological conditions accounts for the same magnitude of absolute NO₂ and PM₁₀ concentration changes as the emission scenarios. The comparison with measurements located in the study area shows that the model is able to predict urban-scale annual average air pollution. The proposed application results show that the model can be appropriate for policy-driven air quality management and planning queries.     

Growth and social behavior in a cichlid fish are affected by social rearing environment and kinship

Living in groups is a widespread phenomenon in many animal taxa. The reduction of predation risk is thought to be an important cause for the formation of groups. Consequently, grouping behavior is particularly pronounced during vulnerable life stages, i.e., as juveniles. However, group living does not only provide benefits but also imposes costs on group members, e.g., increased competition for food. Thus, benefits of grouping behavior might not be evident when predation risk is absent. The adaptive significance of living and also developing in a group independent from predation risk has received relatively little attention although this might have important implications on the evolution and maintenance of group living. The first aim of the present study was to examine whether the social environment affects juvenile performance in the cichlid fish Pelvicachromis taeniatus and, secondly, whether kinship affects social behavior. Kin selection theory predicts benefits from grouping with kin. Here, we demonstrate that juveniles reared in a group grow on average faster compared to juveniles reared in isolation under standardized laboratory conditions without predation risk. Furthermore, we found significant differences in social behavior between juveniles reared in a group and reared in isolation. Fish reared in isolation were significantly more aggressive and less willing to shoal than group-reared fish. As expected, genetic relatedness influenced social behavior in group-reared fish as well: dyads of juveniles consisting of kin showed increased group cohesiveness compared to non-kin dyads. We discuss the potential benefits of group living in general and living with kin in particular.