Predicting the distributions of marine organisms at the global scale

We present and evaluate AquaMaps, a presence-only species distribution modelling system that allows the incorporation of expert knowledge about habitat usage and was designed for maximum output of standardized species range maps at the global scale. In the marine environment there is a significant challenge to the production of range maps due to large biases in the amount and location of occurrence data for most species. AquaMaps is compared with traditional presence-only species distribution modelling methods to determine the quality of outputs under equivalently automated conditions. The effect of the inclusion of expert knowledge to AquaMaps is also investigated. Model outputs were tested internally, through data partitioning, and externally against independent survey data to determine the ability of models to predict presence versus absence. Models were also tested externally by assessing correlation with independent survey estimates of relative species abundance. AquaMaps outputs compare well to the existing methods tested, and inclusion of expert knowledge results in a general improvement in model outputs. The transparency, speed and adaptability of the AquaMaps system, as well as the existing online framework which allows expert review to compensate for sampling biases and thus improve model predictions are proposed as additional benefits for public and research use alike.     

Integrated Assessment of Swiss GHG Mitigation Policies After 2012

The residential sector presents a great potential for greenhouse gases (GHG) mitigation. We perform an integrated assessment of different mitigation policies for Switzerland focusing on the residential sector. We analyze the case of pure incentive taxes and technical regulations. For our analysis, we have coupled a general equilibrium model with a Swiss residential energy model. We find that a progressive GHG tax of more than 200 USD2000/tCO₂ eq is necessary to reach a target of 50% reduction of GHG emissions in 2050. Finally, we also find that efficiency-based technical regulations provide limited additional abatement incentives.     

Optimization of exergy and implications of body sizes of phytoplankton and zooplankton in an aquatic ecosystem model

Size appears to be an important parameter in ecological processes. All physiological processes vary with body size ranging from small microorganisms to higher mammals. In this model, five state variables — phosphorus, detritus, phytoplankton, zooplankton and fish are considered. We study the implications of body sizes of phytoplankton and zooplankton for total system dynamics by optimizing exergy as a goal function for system performance indicator. The rates of different sub-processes of phytoplankton and zooplankton are calculated, by means of allometric relationships of their body sizes. We run the model with different combinations of body sizes of phytoplankton and zooplankton and observe the overall biomass of phytoplankton, zooplankton and fish. The highest exergy values in different combinations of phytoplankton and zooplankton size indicate the maximum biomass of fish with relative proportions of phytoplankton and zooplankton. We also test the effect of phosphorus input conditions corresponding to oligotrophic, mesotrophic, eutrophic system on its dynamics. The average exergy to be maximized over phytoplankton and zooplankton size was computed when the system reached a steady state. Since this state is often a limit cycle, and the exergy copies this behaviour, we averaged the exergy computed for 365 days (duration of 1 year) in the stable period of the run. In mesotrophic condition, maximum fish biomass with relative proportional ratio of phytoplankton, zooplankton is recorded for phytoplankton size class 3.12 (log V μm³ volume) and zooplankton size 4 (log V μm³ volume). In oligotrophic condition the highest average exergy is obtained in between phytoplankton size 1.48 (log V μm³ volume) and zooplankton size 4 (log V μm³ volume), whereas in eutrophic condition the result shows the highest exergy in the combination of phytoplankton size 5.25 (log V μm³ volume) and zooplankton size 4 (log V μm³ volume).     

Zoogeography of fish parasites of the pearlside (Maurolicus muelleri), with genetic evidence of Anisakis simplex (s.s.) from the Mid-Atlantic Ridge

A total of 200 Maurolicus muelleri from the Mid-Atlantic Ridge (MAR) and the Norwegian Deep (ND) were studied for parasitic helminths. Two different metazoans were isolated from the MAR and five species from the ND. The predominant parasite species in both areas were tetraphyllidean cestode larvae (Scolex pleuronectis) and the anisakid nematode Anisakis simplex sensu stricto (s.s.), the latter being identified using genetic analysis of the internal transcribed spacer (ITS-1, ITS-2) and 5.8S regions of the rDNA. The parasite fauna of M. muelleri from the MAR was less species rich in comparison to ND, due to the deep-sea and oceanic environment. The digeneans Brachyphallus crenatus and Lecithaster confusus as well as the raphidascarid fish nematode Hysterothylacium aduncum were only collected from the ND. This can be explained either by the deep origin of the sampled fish specimens or the lack of suitable intermediate or final hosts in the region. Based on the frequent occurrence of A. simplex (s.s.) around the MAR and the ND, a pelagic life cycle is suggested at both localities, involving baleen and toothed whales as final and pelagic and mesopelagic fish and invertebrates as intermediate or paratenic hosts.     

Comparison of exergy found by a classical thermodynamic approach and by the use of the information stored in the genome

It is possible to calculate the exergy for organisms based on classic thermodynamics as already demonstrated by Mejer and Jorgensen [Mejer, H., Jorgensen, S.E., 1979. Exergy and ecological buffer capacity. State-of-the-art in Ecol. Model. 7, 829–846]. The calculation of exergy as eco-exergy, which is based on the information stored in the genome, has lately been proposed by Jørgensen and co-workers. Recently, Ludovisi [Ludovisi, A., 2009. Exergy vs information in ecological successions: interpreting community changes by a classical thermodynamic approach. Ecol. Model. 220, 1566–1577] has put forward a method based on classical thermodynamics, which leads to the calculation of “virtual” values of concentration at equilibrium for a number of organic compounds (VEC) and freshwater organisms (VECE). This paper compares the two approaches by analysing the correlation existing between the VECE- and the β-values derived by Jørgensen et al. [Jørgensen, S.E., Ladegaard, N., Debeljak, M., Marques, J.C., 2005. Calculations of exergy for organisms. Ecol. Model. 185, 165–175]. It was found that there was a good correlation, which can be useful for estimating β-values for organisms whose genome is not known in a sufficient detail. The relationship between VECE- and β-values suggests that two proposed thermodynamic orientors based on these quantities – the eco-exergy index and the structural information – should lead to coherent results when applied to the evaluation of the development state of ecosystems. A numerical simulation shows that this expectation is verified in a major case, but also that different, even opposite, responses can arise, depending on the biological composition of the biocoenosis investigated.