Molecular structure of extracellular poly(3-hydroxybutyrate) depolymerase fromAlcaligenes faecalis T1

The amino acid sequence of a peptide containing an active serine was examined with poly(3-hydroxybutyrate) (PHB) depolymerase ofAlcaligenes faecalis T1. The sequence Cys-Asn-Ala-Trp-Ala-Gly-Ser-Asn-Ala-Gly-Lys was obtained. This amino acid sequence around the active serine does not fit any reported sequence of other esterases and proteases. On the other hand, a segment of the amino acid sequence of PHB depolymerase ofA. faecalis was homologous to the type III sequence of fibronectin. Similar sequences have been reported in some type of bacterial chitinase and cellulases, and PHB depolymerase seems to have an overall similarity to these bacterial extracellular hydrolases.     

Removal of Cr(VI) from aqueous solutions by the culm of bamboo grass treated with concentrated sulfuric acid

We prepared a carbonaceous sorbent for Cr(VI) from the culm of Sasa kurilensis by dehydration with concentrated H₂SO₄. The removal of Cr(VI) by the sorbent was highly solution pH dependent and mainly governed by physicochemical sorption. The equilibrium data fit well in the Langmuir isotherm model and indicate the endothermic nature of the Cr(VI) sorption. The desorption experiments suggest that the Cr(VI) sorption is generally irreversible, owing to strong interaction of HCrO₄⁻ with the active sites of the sorbent.     

The possibility of sustainable pest management by introducing bio-diversity: simulations of pest mite outbreak and regulation

Since the late 1980s, spider mite pests have caused serious damage to many moso bamboo (Phyllostachys pubescens) forests in China’s Fujian province. The culms of this plant are an essential component of the building and handicraft industries, and the shoots are a prized food item in many Asian countries. Furthermore, bamboo forests play an important soil conservation role in mountainous areas. We examined pest mite outbreaks in several moso bamboo plantations in Fujian, and could show that a change in cultivation style from polyculture (a kind of mixed forest) to monoculture (all plants other than bamboo were removed) was primarily responsible for the local extinction of an important predaceous mite species. This phenomenon is due to the periodic shedding of leaves by the bamboo, which forces the predator mites occurring on bamboo to switch to prey mite species that occur on other plants. We then tried to elucidate the factors that resulted from such a cultivation change. Adopting a computer simulation approach, we could successfully show that at least two plants, moso bamboo and Chinese silvergrass, are necessary to maintain stable predator–prey interactions in moso forests. That is, systems consisting of one common predator and two host-specific pest mites on different host plant species frequently became stable when the pest mites were at low density. This finding indicates clearly that bio-diversity, even when it consists of only two plants and three mite species as in this study, is necessary for the sustainable regulation of large-scale forests, such as moso bamboo plantations.     

Ion chromatographic determination of anions in rainwater

High acidity rainwater has recently become an issue in environmental pollution because of its great influence on ecological systems with special reference to the human environment. To solve this problem, the chemical behaviors of various pollutants in the air, particularly in the wet atmosphere must be studied. Ion chromatography was used for rapid analysis of trace amounts of anions.As a result, it was found that a combination of 2mM Na₂CO₃ and 5mM NaOH as an eluent was suitable for the separation of various anions. The reproducibility of determination of anions in standard solutions was found to be satisfactory with a coefficient of variation (CV) of 2–4% for F^?, Br^?, NO^?₃, SO^2?₃, SO^2?₄, and PO^3?₄, but not for NO^?₂. The determination of NO^?₂ was accomplished by preparing an eluent having almost the same composition and cencentration as that of the standard and sample solutions. The precision of the method with rainwater samples was less than 10%, and was considered to be usable for data analysis.In addition, a considerable number of ions in rainwater samples could be determined by using 1–3 ml of the sample without pretreatment. It was found that ion chromatography was one of the best means to obtain information on the chemical behaviors of trace amounts of anions in rainwater.     

Effects of higher-order structure of poly(3-hydroxybutyrate) on its biodegradation. II. Effects of crystal structure on microbial degradation

As one of a series of studies concerning the relationship between the higher-order structure and the biodegradability of a biodegradable plastic, the effects of the crystal structure of the plastic on microbial degradation were investigated. Bacterial poly(d-(–)-3-hydroxybutyrate) (PHB) films which had a wide range of crystallinity were prepared by the melt-quenching method. Results of the microbial degradation indicated that the development of crystallinity evidently depressed the microbial degradability. From scanning electron microscopy (SEM) observations, it is suggested that the microbial degradation proceeded in at least two manners. One was preferential degradation of the amorphous region leaving the crystalline lamellae intact, which was considered to be a homogeneous enzymatic degradation over the surface. The other was nonpreferential spherical degradation on the surface. The SEMs indicate that the spherical holes were the result of colonization by degrading bacteria. The holes varied in size and number with the change of crystal structure. Therefore, it is considered that the crystal structure of PHB also influenced the physiological behavior of the degrading bacteria on the PHB surface.     

One-pot wet ball-milling for waste wire-harness recycling

Journal of Material Cycles and Waste Management - In this study, we developed a one-pot wet ball-milling method for the recovery of highly pure copper wire, poly(vinyl chloride) (PVC) coating, and...     

Middle-thermophilic sulfur-oxidizing bacteria Thiomonas sp. RAN5 strain for hydrogen sulfide removal

Hydrogen sulfide (H2S) is one of the most toxic and offensively odorous gases and is generated in anaerobic bioreactors. A middle-thermophilic sulfur-oxidizing bacterium (SOB), Thiomonas sp. strain RAN5, was isolated and applied for H2S removal from both artificial and anaerobically digested gas. When a bioreactor containing medium inoculated with RAN5 was aerated continuously with artificial gas (containing 100 ppm H2S) at 45 degrees C for 156 hr, the H2S concentration in the vented gas was reduced by 99%. This was not affected by the presence of other microbes in the bioreactor The H2S removal efficiency of the RAN5 bioreactor for anaerobically digested gas was greater than 99% at influent H2S concentrations ranging from 2 to 1800 ppm; the efficiency decreased to 90% at influent H2S concentrations greater than 2000 ppm. Thiomonas sp. strain RAN5 cannot survive at room temperature, and thus its leakage from a wastewater treatment plant would not damage sewage systems. These data suggest that Thiomonas sp. strain RAN5 may be a useful microorganism for H2S removal.     

DNA-based prenatal carrier detection for group a xeroderma pigmentosum in a chorionic villus sample

DNA-based prenatal carrier detection of group A xeroderma pigmentosum (XP-A) is reported. Chorionic villus sampling was done at the tenth gestational week in a pregnant woman whose first child suffers from XP-A. Genomic DNAs from the villi, proband, and parents were PCR (polymerase chain reaction)-amplified using three sets of primers, because the PCR and a subsequent enzyme digestion with HphI, AlwNI, or MseI may detect the three most frequent mutations of the XP-A complementing gene (XPAC) in Japanese XP-A patients. The results showed that the proband is a homozygote and that the parents and fetus are heterozygotes for a base substitution at the 3′ acceptor site of intron 3 of XPAC, indicating that the fetus is a healthy carrier of XP-A. This is the first case of prenatal carrier detection of the disorder.