Maximizing Offspring Production While Maintaining Genetic Diversity in Supplemental Breeding Programs of Highly Fecund Managed Species

Abstract:  Supplemental breeding is an intensive population management strategy wherein adults are captured from nature and spawned in controlled settings, and the resulting offspring are later released into the wild. To be effective, supplemental breeding programs require crossing strategies that maximize offspring production while maintaining genetic diversity within each supplemental year class. We used computer simulations to assess the efficacy of different mating designs to jointly maximize offspring production and maintain high levels of genetic diversity (as measured by the effective population size) under a variety of biological conditions particularly relevant to species with high fecundity and external fertilization, such as many fishes. We investigated four basic supplemental breeding designs involving either monogamous pairings or complete factorial designs (in which every female is mated to every male and vice versa), each with or without the added stipulation that all breeders contribute equally to the total reproductive output. In general, complete factorial designs that did not equalize parental contributions came closest to the goal of maximizing offspring production while still maintaining relatively large effective population sizes. Next, we estimated the effective population size of 10 different supplemental year classes within the breeding program of the robust redhorse (Moxostoma robustum). Two year classes failed to produce progeny, whereas successful year classes used partial factorial designs to realize effective sizes ranging from 2 to 26 individuals. On average, a complete factorial design could increase the effective size of each robust redhorse supplemental year class by 19%.     

Effect of Migration or Inbreeding Followed by Selection on Low-Founder-Number Populations: Implications for Captive Breeding Programs

Using the housefly, Musca domestica (L), as a model system, we tested the ability of two extremes in the range of possible captive breeding protocols to yield sustainable populations following founding with low founder numbers. The protocols tested included two levels of migration as well as inbreeding followed by selection, each with appropriate controls. Each low-founder-number population was founded with two pairs of flies. The maximum migration scheme had 50% migration per generation, and the minimum migration populations experienced a migration rate of 2.5% per generation. The control level of migration was 0%. A fourth low-founder-number treatment was designed to test the effect of inbreeding followed by selection. Two sets of high-founder-number control groups were also derived from the stock population. Two fitness measures, viability and productivity of the populations, were recorded at the fifth generation. Populations in the minimum-migration and zero migration treatment groups had lower fitness than populations in any other treatment for both measures. Populations that experienced inbreeding and selection for high fitness levels, high levels of migration, or large high-founder-number populations were equally fit. These results demonstrate that a captive-breeding scheme that contains substantial levels of migration or inbreeding followed by selection can yield highly adapted populations.     

Inhibition of Amazon Deforestation and Fire by Parks and Indigenous Lands

Abstract:  Conservation scientists generally agree that many types of protected areas will be needed to protect tropical forests. But little is known of the comparative performance of inhabited and uninhabited reserves in slowing the most extreme form of forest disturbance: conversion to agriculture. We used satellite-based maps of land cover and fire occurrence in the Brazilian Amazon to compare the performance of large (>10,000 ha) uninhabited (parks) and inhabited (indigenous lands, extractive reserves, and national forests) reserves. Reserves significantly reduced both deforestation and fire. Deforestation was 1.7 (extractive reserves) to 20 (parks) times higher along the outside versus the inside of the reserve perimeters and fire occurrence was 4 (indigenous lands) to 9 (national forests) times higher. No strong difference in the inhibition of deforestation ( p = 0.11) or fire ( p = 0.34) was found between parks and indigenous lands. However, uninhabited reserves tended to be located away from areas of high deforestation and burning rates. In contrast, indigenous lands were often created in response to frontier expansion, and many prevented deforestation completely despite high rates of deforestation along their boundaries. The inhibitory effect of indigenous lands on deforestation was strong after centuries of contact with the national society and was not correlated with indigenous population density. Indigenous lands occupy one-fifth of the Brazilian Amazon—five times the area under protection in parks—and are currently the most important barrier to Amazon deforestation. As the protected-area network expands from 36% to 41% of the Brazilian Amazon over the coming years, the greatest challenge will be successful reserve implementation in high-risk areas of frontier expansion as indigenous lands are strengthened. This success will depend on a broad base of political support.     

Significance of Sighting Rate in Inferring Extinction and Threat

Abstract:  We are now entering a time of immense environmental upheaval in which, increasingly, experts are required to provide conservation assessments. Quantitative assessment of trends in species' range and abundance is costly, requiring extensive field studies over a long period of time. Unfortunately, many species are only known through a few "chance" sightings or a handful of specimens, and therefore extinction may be even harder to ascertain. Several methods have been proposed for estimating the probability of extinction. However, comparison within and between species is difficult because of variations in sighting rates. We applied a probabilistic method that incorporates sighting rate to the sighting record of Vietnamese slipper orchids ( Paphiopedilum ). The method generates a probability that another sighting will occur given the previous sighting rate and the time since last observation. This allows greater comparability between species discovered at different times. Its predictions were more highly correlated with the World Conservation Union criteria than previous methods. Trends in data collection and the political climate of a country, which affects access to material, are important potential sources of variation that affect sighting rates. A lack of understanding of the process by which data are generated makes inferring extinction from sighting records difficult because extinction status depends on how the sighting rate varies. However, such methods allow rapid conservation prioritization of taxa that are poorly known and would otherwise go unassessed.     

Generation of Priority Research Questions to Inform Conservation Policy and Management at a National Level

Abstract: Integrating knowledge from across the natural and social sciences is necessary to effectively address societal tradeoffs between human use of biological diversity and its preservation. Collaborative processes can change the ways decision makers think about scientific evidence, enhance levels of mutual trust and credibility, and advance the conservation policy discourse. Canada has responsibility for a large fraction of some major ecosystems, such as boreal forests, Arctic tundra, wetlands, and temperate and Arctic oceans. Stressors to biological diversity within these ecosystems arise from activities of the country's resource‐based economy, as well as external drivers of environmental change. Effective management is complicated by incongruence between ecological and political boundaries and conflicting perspectives on social and economic goals. Many knowledge gaps about stressors and their management might be reduced through targeted, timely research. We identify 40 questions that, if addressed or answered, would advance research that has a high probability of supporting development of effective policies and management strategies for species, ecosystems, and ecological processes in Canada. A total of 396 candidate questions drawn from natural and social science disciplines were contributed by individuals with diverse organizational affiliations. These were collaboratively winnowed to 40 by our team of collaborators. The questions emphasize understanding ecosystems, the effects and mitigation of climate change, coordinating governance and management efforts across multiple jurisdictions, and examining relations between conservation policy and the social and economic well‐being of Aboriginal peoples. The questions we identified provide potential links between evidence from the conservation sciences and formulation of policies for conservation and resource management. Our collaborative process of communication and engagement between scientists and decision makers for generating and prioritizing research questions at a national level could be a model for similar efforts beyond Canada.     

Fenton oxidation of 2, 4-and 2, 6-dinitrotoluene and acetone inhibition

The performances and kinetic parameters of Fenton oxidation of 2,4- and 2,6-dinitrotoluene (DNT) in water-acetone mixtures and explosive contaminated soil washing-out solutions were investigated at a laboratory scale. The experimental results show that acetone can be a significant hydroxyl radical scavenger and result in serious inhibition of Fenton oxidation of 2,4- and 2,6-DNT. Although no serious inhibition was found in contaminated soil washing-out solutions, longer reaction time was needed to remove 2,4- and 2,6-DNT completely, mainly due to the competition of hydroxyl radicals. Fenton oxidation of 2,4- and 2,6-DNT fit well with the first-order kinetics and the presence of acetone also reduced DNT’s degradation kinetics. Based on the comparison and matching of retention time and ultraviolet (UV) spectra between high performance liquid chromatography (HPLC) and standards, the following reaction pathway for 2,4-DNT primary degradation was proposed: 2,4-DNT → 2,4-dinitro-benzaldehyde → 2,4-dinitrobenzoic acid → 1,3-dinitrobenzene → 3-nitrophenol.     

Regional IUCN Red Listing: the Process as Applied to Birds in the United Kingdom

Abstract:  The World Conservation Union (IUCN) has developed guidelines that enable the assessment of extinction risk at a regional scale. We used these guidelines to assess the extinction risk of birds in the United Kingdom for comparison with an existing assessment of conservation status. Sixty-four species were categorized as regionally threatened, of which 12 were critically endangered. The categorizations of the 223 species assessed agreed broadly with those from the existing U.K. system, which considers more than extinction risk, thus giving a more complete assessment of conservation status. There was, however, a tendency for the IUCN process to give higher risk status to edge-of-range species (some of which are relatively recent colonists considered of comparatively low conservation concern) and low status to those that have declined substantially but remain common (such as many farmland birds, the focus of considerable conservation effort in the United Kingdom). The final red list depended heavily on the subjective decisions made during the assessment process. An alternative interpretation of the guidelines could have resulted in as many as 19 or as few as 6 species being listed as critically endangered. We recommend the revision of the IUCN guidelines to reduce this subjectivity, in particular with respect to the effect of extralimital populations on the likelihood of regional extinction, and hence the potential for variation in the manner of application between regional red-list assessors. Preventing extinction does not have to be the principal driving force behind conservation action at a regional scale if the continuance of a species is safeguarded in other regions.     

Predicting Bird Species Distributions in Reconstructed Landscapes

Abstract:  Landscape optimization for biodiversity requires prediction of species distributions under alternative revegetation scenarios. We used Bayesian model averaging with logistic regression to predict probabilities of occurrence for 61 species of birds within highly fragmented box–ironbark forests of central Victoria, Australia. We used topographic, edaphic, and climatic variables as predictors so that the models could be applied to areas where vegetation has been cleared but may be replanted. Models were evaluated with newly acquired, independent data collected in large blocks of remnant native vegetation. Successful predictions were obtained for 18 of 45 woodland species (40%). Model averaging produced more accurate predictions than "single best" models. Models were most successful for smaller-bodied species that probably depend on particular vegetation types. Predictions for larger, generalist species, and seasonal migrants were less successful, partly because of changes in species distributions between model building (1995–1997) and validation (2004–2005) surveys. We used validated models to project occurrence probabilities for individual species across a 12,000-km² region, assuming native vegetation was present. These predictions are intended to be used as inputs, along with landscape context and temporal dynamics, into optimization algorithms to prioritize revegetation. Longer-term data sets to accommodate temporal dynamics are needed to improve the predictive accuracy of models.     

Conflicting and Complementary Ethics of Animal Welfare Considerations in Reintroductions

Despite differences in focus, goals, and strategies between conservation biology and animal welfare, both are inextricably linked in many ways, and greater consideration of animal welfare, although important in its own right, also has considerable potential to contribute to conservation success. Nevertheless, animal welfare and animal ethics are not always considered explicitly within conservation practice. We systematically reviewed the recent scientific peer‐reviewed and online gray literature on reintroductions of captive‐bred and wild‐caught animals (mammals, birds, amphibians, and reptiles) to quantify the occurrence of animal welfare issues. We considered monitoring that could be indicative of the animal's welfare status and supportive management actions that could improve animal welfare (regardless of whether the aim was explicitly animal‐welfare orientated). Potential welfare issues (of variable nature and extent) were recorded in 67% of 199 projects reviewed; the most common were mortality >50%, dispersal or loss of animals, disease, and human conflict. Most (>70%) projects monitored survival, 18% assessed body condition, and 2% monitored stress levels. Animal welfare, explicitly, was referred to in 6% of projects. Supportive actions, most commonly use of on‐site prerelease pens and provision of supplemental food or water, were implemented in 79% of projects, although the extent and duration of support varied. Practitioners can address animal‐welfare issues in reintroductions by considering the potential implications for individual animals at all stages of the release process using the decision tree presented. We urge practitioners to report potential animal‐welfare issues, describe mitigation actions, and evaluate their efficacy to facilitate transparent evaluation of common moral dilemmas and to advance communal strategies for dealing with them. Currently, comparative mortality rates, health risks, postrelease stress, effectiveness of supportive measures, and behavior of individuals warrant further research to improve animal welfare in reintroductions and to increase success of such projects. Ética Conflictiva y Complementaria al Considerar el Bienestar Animal en Reintroducciones