Use of Linkage Disequilibrium Data to Estimate Effective Size of Hatchery and Natural Fish Populations

A primary parameter in the assessment of the viability of a population is its effective population size ( Ne ). Allozyme analysis of four groups of fishes provided data on linkage disequilibrium, which were then used to estimate Ne . The groups included hatchery samples of juvenile white seabass, Atractoscion nobilis , juvenile rainbow trout, Oncorhynchus mykiss , from the Shasta Hatchery, and juvenile chinook salmon, O. tshawytscha , from the Coleman National Fish Hatchery. The fourth sample consisted of juvenile chinook salmon from the threatened winter run in the upper Sacramento River. The groups of fish were chosen to represent different applications of the methodology to conservation of fishes. For a variety of reasons. Ne may be considerably lower than census counts of fish present in the parental populations. The Ne of the hatchery broodstock that produced the sample of juvenile white seabass was estimated to be approximately 10, although 25 adult white seabass were present in a mass spawning tank. Ne estimates for the parental populations of the Shasta and Coleman Hatchery samples were 35.8 and 132.5, respectively. The actual number of fish spawned at the Shasta Hatchery was approximately 40, whereas nearly 10,000 salmon were spawned at the Coleman Hatchery. The threatened winter run of chinook salmon had an estimated Ne of 85.5 and an approximate run size of 2000 salmon. The method of estimating effective population size from linkage disequilibrium data appears to result in realistic estimates of effective population size when adequate sample size and a sufficient number of polymorphic loci are available.     

Reproductive success,relative abundance and population structure of two species of Nephtys in an estuarine beach

During 1978 and 1979 specimens of Nephtys hombergii in the River Tyne estuary (North East England) became gravid during the winter but did not spawn in the spring breeding season; instead their gametes were resorbed. The drastic effects of these spawning failures were apparent in the population structure in 1980, when the 1978 and 1979 year-classes were shown to be virtually absent, by the size of the individuals in the population and the numbers of growth lines in their jaws. The population structure in 1975, by contrast, indicated that recruitment during the preceding 4 to 5 yr had been good. Spawning was also effective in 1980, and an 0 group was detected in August 1980. Comparable data has been obtained for N. caeca, which occurs in the same beach. It shows that recruitment of this species during 1976–1980 was consistently good, whereas analysis of the age-class frequencies suggests that recruitment of N. caeca was poor in 1973 and 1975. The dominance relationship of the two species in the beach has been reversed during the period 1975–1980. It is suggested that the sympatric distribution of the two species is maintained in part by periodic reproductive failure. The causes of this are not yet known; possible reasons, including the extremely cold conditions experienced in 1978–1979 are discussed. The difference in frequency of the 1978, 1979 and 1980 year classes will now permit a rigorous evaluation of the relationship between the number of growth lines in the jaws and age in N. hombergii.     

Concentration and distribution of heavy metals in tissues of two cephalopods,Eledone cirrhosa and Sepia officinalis,from the French coast of the English Channel

The concentrations of 11 heavy metals (Ag, Cd, Co, Cr, Cu, Fe, Mn, Ni, Pb, V and Zn) were measured in the tissues (digestive gland, branchial hearts, gills, digestive tract, kidney, genital tract, muscle, skin, shell) of the two cephalopods Eledone cirrhosa (d'Orb.) and Sepia officinalis (L.) collected from the French coast of the English Channel in October 1987. The tissues of both species displayed a similar pattern of heavy-metal accumulation: the digestive gland, branchial hearts and kidney were the major sites of concentration for all 11 metals; the digestive gland accumulated silver, cadmium, cobalt, copper, iron, lead and zinc, the branchial hearts high concentrations of copper, nickel and vanadium, and the kidney high concentrations of manganese, nickel and lead. The digestive gland, which constituted 6 to 10% of the whole-animal tissue, contained >80% of the total body burden of Ag, Cd and Co and from 40 to 80% of the total body burden of the other metals. The ratios between heavy metal concentrations in the digestive gland and those in the muscle separated the elements into three groups, those with a ratio 10 (Cr, Mn, Ni, Pb, V, Zn), those with a ratio >10 to <50 (Co, Cu, Fe), and those with a ratio 50 (Ag, Cd). The digestive gland of cephalopods (carnivorous molluscs whose age can be easily calculated with great accuracy) would seem to constitute a good potential indicator of heavy metal concentrations in the marine environment.     

Social context modulates sickness behavior

Sickness behaviors constitute an array of symptoms exhibited by an animal during the course of an infection, including reduced activity, reduced food and water intake, and reduced social interactions. It is hypothesized that these symptoms enable reallocation of finite energy resources to fight infection. In this way, by focusing energy on healing, available resources are being removed from other activities, potentially reducing adaptive opportunities, such as mating. Hence, to achieve increased reproductive success, animals might be able to adjust the expression of sickness behaviors to their environmental circumstances. While abiotic conditions such as temperature and season can modulate sickness behaviors, no studies in passerines have linked modulation of sickness behaviors to social settings. Here, it is demonstrated that social surroundings affect the extent to which animals exhibit symptoms of sickness. After an immune challenge, zebra finches kept in isolation markedly reduced activity, but those kept in a colony setting did not. The same trend is verified when looking at the time they spent resting. Additionally, a proinflammatory cytokine (interleukin-6) was quantified in plasma samples and all animals that had been immune challenged showed increased levels of this marker, showing that the physiological response was similar. Hence, birds in a social context were able to overcome the behavioral, but not physiological, symptoms usually associated with an inflammatory response. These findings suggest a trade-off between allowing the body to respond to an infection and taking advantage of being in a social situation.     

Household wood heater usage and indoor leakage of BTEX in Launceston,Australia: A null result

A study has been conducted in Launceston, Australia, to determine within households with wood heaters the effect of leakage from the heater and flue on the indoor air concentrations of the pollutants: benzene, toluene, ethylbenzene and xylene (BTEX). The study involved three classes: 28 households without wood heaters, 19 households with wood heaters compliant with the relevant Australian Standard and 30 households with non-compliant wood heaters. Outdoor and indoor BTEX concentrations were measured in each household for 7 days during summer when there was little or no wood heater usage, and for 7 days during winter when there was widespread wood heater usage. Each participant kept a household activity diary throughout their sampling periods. For wintertime, there were no significant differences of the indoor BTEX concentrations between the three classes of households. Also there were no significant relationships between BTEX indoor concentrations within houses and several measures of the amount of wood heater use within these houses. For the households sampled in this study, the use of a wood heater within a house did not lead to BTEX release within that house and had no direct detectable influence on the concentrations of BTEX within the house. We propose that the pressure differences associated with the both the leakiness or permeability of the building envelope and the draught of the wood heater have key roles in determining whether there will be backflow of smoke from the wood heater into the house. For a leaky house with a well maintained wood heater there should be no backflow of smoke from the wood heater into the house. However backflow of smoke may occur in well sealed houses.The study also found that wood heater emissions raise the outdoor concentrations of BTEX in winter in Launceston and through the mixing of outdoor air through the building envelopes into the houses, these emissions contribute to increases in the indoor concentrations of BTEX in winter in all houses in Launceston.     

Community attitudes to cystic fibrosis carrier testing in England: A pilot study

Inexpensive and accurate carrier testing for cystic fibrosis (CF) will be possible in the near future. There are no existing studies on the attitudes of English persons in the community to carrier testing for CF or any other recessive disorder. We have conducted a trial study of 166 persons at two schools, two doctors' surgeries, and a family planning clinic. Only a minority had clear pre-existing knowledge of cystic fibrosis and its genetic nature. However, over 80 per cent of those questioned expressed interest in knowing their carrier status. Although it is well known that uptake can only be assessed when a service is in place, and while further studies are required to confirm that testing will be of interest to couples of reproductive age with no previous knowledge of CF, the data strongly suggest that there will be interest in communitywide testing for CF carrier status when such a test becomes available in the United Kingdom.     

Environmental VOSCs--formation and degradation of dimethyl sulfide, methanethiol and related materials

Volatile organic sulfur compounds (VOSCs) play a major role in the global sulfur cycle. Two components, dimethyl sulfide (DMS) and methanethiol (MT) are formed in large amounts by living systems (e.g. algae, bacteria, plants), particularly in marine environments. A major route to DMS is by action of a lyase enzyme on dimethylsulfoniopropionate (DMSP). DMSP has other roles, for instance as an osmoprotectant and cryoprotectant. Demethiolation of DMSP and other materials leads to MT. A major transport process is release of DMS from the oceans to the atmosphere. Oxidation of DMS in the atmosphere by hydroxyl and nitrate radicals produces many degradation products including CO2, COS, dimethyl sulfoxide, dimethyl sulfone, organic oxyacids of sulfur, and sulfate. These materials also have roles in biotic processes and there are complex metabolic interrelationships between some of them. This review emphasizes the chemical reactions of the organic sulfur cycle. For biotic reactions, details of relevant enzymes are provided when possible.     

Weekend–weekday aerosols and geographic variability in cloud-to-ground lightning for the urban region of Atlanta, Georgia, USA

We characterized the differences in warm-season weekday and weekend aerosol conditions and cloud-to-ground (CG) flashes (1995–2008) for an 80,000 square kilometer region around Atlanta, Georgia, a city of 5.5 million in the humid subtropics of the southeastern United States. An integration of distance-based multivariate techniques (hierarchical agglomerative clustering, multiresponse permutation procedures, fuzzy kappa statistics, and Mantel tests) indicated a greater concentration of CG flash activity within a 100 km radius around Atlanta under weekday aerosol concentrations. On weekends, these effects contracted toward the city. This minimized any weekly anthropogenic cycle over the more densely populated urban center even though this location had a higher flash density, a higher percentage of days with flashes, and stronger peak currents over the course of a week compared to the surrounding region. The sharper contrasts in weekday and weekend lightning regime developed outside the perimeter of the city over nonurban land uses. Here, lightning on weekend and weekdays differed more in its density, frequency, polarity, and peak current. Across the full extent of the study region, weekday peak currents were stronger and flash days more frequent, suggesting that weekly CG lightning signals have a regional component not tied to a single city source. We integrate these findings in a conceptual model that illustrates the dependency of weekly anthropogenic weather signals on spatial and temporal extent.     

Assessment of air quality in Turin by personal monitoring of nonsmokers for respirable suspended particles and environmental tobacco smoke

Exposure to respirable suspended particles (RSP), environmental tobacco smoke (ETS) particles, nicotine, and 3-ethenylpyridine (3-EP) was assessed in Turin for 188 subjects during February and March 1995. Personal monitors were worn over a 24-h period, each subject providing a saliva sample for cotinine analysis both prior to and following the monitoring period. Comprehensive lifestyle questionnaires were also completed before and after the 24-h monitoring period. The study comprised housewives in one group, primarily for assessing exposures in the home, and office workers in a second group to assess exposures in the workplace. A single personal monitor was worn by each participating housewife, while employed subjects wore one monitor at work and a separate monitor at home and elsewhere. Based on median 24-h time-weighted average exposures, the most highly exposed subjects to RSP, ETS particles, nicotine, and 3-EP were office workers living with smokers and employed in locations where smoking was allowed. Annualised exposures for nonsmokers living and working in smoking environments indicate that the home contribution to RSP is between 3 and 4 times that obtained from the workplace. Similarly nicotine and ETS particle contributions from the home are, respectively, 4 and 7 times more than those obtained from the workplace. Subjects living and working with smokers had the highest median saliva cotinine levels of 1.7 ng mL⁻¹. Using a cut off level of 25 ng mL⁻¹, up to 6.5% of subjects were found to have misreported themselves as nonsmokers.