Control system approaches to ecological systems analysis: Invariants and frequency response

The steady-state assumption is a mainstay for the analysis of ecological systems with more than three or four states. However, it is well accepted in ecology that inputs to large systems come in pulses assumed to have a reasonably constant magnitude and frequency. Steady pulse inputs and the use of electro-chemical–mechanical control systems methodology enables limited short term dynamic responses of ecological systems of a scale often occurring in systems of potential engineering importance to be analyzed. This paper explores and presents a survey of multi-input–multi-output (MIMO) control systems analysis of ecosystem network models to better understand pulse frequency issues and further develop experimentally verifiable approaches to testing the MIMO concept. The analysis process is demonstrated using two network model exemplars. Two aspects of MIMO analyses appear relevant to understanding ecological systems: (1) Eigenvalue invariant analyses and singular value decomposition (SVD) analyses enable assessment of stability and relative strength of states. Eigenvalues reflect time constants and provide a check on experimentally determined system matrices. (2) Analysis of SVD versus frequency for each output indicates maximum pulse frequencies that allow system components to benefit from pulsing. As a group, MIMO analyses complement other analytical methods and provide a theoretical systems focus convenient for analyzing ecosystems from an engineering perspective.     

The Reynolds transport theorem: Application to ecological compartment modeling and case study of ecosystem energetics

The Reynolds transport theorem (RTT) from mathematics and engineering has a rich history of success in mass transport dynamics and traditional thermodynamics. This paper introduces RTT as a complementary approach to traditional compartmental methods used in ecological modeling and network analysis. A universal system equation for a generic flow quantity is developed into a generic open-system differential expression for conservation of energy. Nonadiabatic systems are defined and incorporated into control volume (CV) and control surface (CS) perspectives of RTT where reductive assumptions in empirical data are then formally introduced, reviewed, and appropriately implemented. Compartment models are abstract, time-dependent systems of simultaneous differential equations describing storage and flow of conservative quantities between interconnected entities (the compartments). As such, they represent a set of flexible and somewhat informal, assumptions, definitions, algebraic manipulations, and graphical depictions subject to influence and selectively parsed expression by the modeler. In comparison, RTT compartment models are more rigorous and formal integro-differential equations and graphics initiated by the RTT universal system equation, forcing an ordered identification of simplifying assumptions, ending with clearly identified depictions of the transfer and transport of conservative substances in physical space and time. They are less abstract in the rigor of their equation development leaving less ambiguity to modeler discretion. They achieve greater consistency with other RTT compartment style models while possibly generating greater conformity with physical reality. Characteristics of the RTT approach are compared with those of a traditional compartment model of energy flow in an intertidal oyster-reef community.     

Inferring linear feature use in the presence of GPS measurement error

Global Positioning System (GPS) collars are increasingly used to study animal movement and habitat use. Measurement error is defined as the difference between the observed and true value being measured. In GPS data measurement error is referred to as location error and leads to misclassification of observed locations into habitat types. This is particularily true when studying habitats of small spatial extent with large amounts of edge, such as linear features (e.g. roads and seismic lines). However, no consistent framework exists to address the effect of measurement error on habitat classification of observed locations and resulting biological inference. We developed a mechanistic, empirically-based method for buffering linear features that minimizes the underestimation of animal use introduced by GPS measurement error. To do this we quantified the distribution of measurement error and derived an explicit formula for buffer radius which incorporated the error distribution, the width of the linear feature, and a predefined amount of acceptable type I error in location classification. In our empirical study we found the GPS measurement error of the Lotek GPS_3300 collar followed a bivariate Laplace distribution with parameter ρ = 0.1123. When we applied our method to a simulated landscape, type I error was reduced by 57%. This study highlights the need to address the effect of GPS measurement error in animal location classification, particularily for habitats of small spatial extent.     

Plant chemistry and insect sequestration

Most plant families are distinguished by characteristic secondary metabolites, which can function as putative defence against herbivores. However, many herbivorous insects of different orders can make use of these plant-synthesised compounds by ingesting and storing them in their body tissue or integument. Such sequestration of putatively unpalatable or toxic metabolites can enhance the insects’ own defence against enemies and may also be involved in reproductive behaviour. This review gives a comprehensive overview of all groups of secondary plant metabolites for which sequestration by insect herbivores belonging to different orders has been demonstrated. Sequestered compounds include various aromatic compounds, nitrogen-containing metabolites such as alkaloids, cyanogenic glycosides, glucosinolates and other sulphur-containing metabolites, and isoprenoids such as cardiac glycosides, cucurbitacins, iridoid glycosides and others. Sequestration of plant compounds has been investigated most in insects feeding or gathering on Apocynaceae s.l. (Apocynoideae, Asclepiaoideae), Aristolochiaceae, Asteraceae, Boraginaceae, Fabaceae and Plantaginaceae, but it also occurs for some gymnosperms and even lichens. In total, more than 250 insect species have been shown to sequester plant metabolites from at least 40 plant families. Sequestration predominates in the Coleoptera and Lepidoptera, but also occurs frequently in the orders Heteroptera, Hymenoptera, Orthoptera and Sternorrhyncha. Patterns of sequestration mechanisms for various compound classes and common or individual features occurring in different insect orders are highlighted. More research is needed to elucidate the specific transport mechanisms and the physiological processes of sequestration in various insect species.     

Love bites: male fang use during coercive mating in wolf spiders

Evolutionary conflicts of interest between the sexes are common, as mating tactics and strategies that increase fitness benefits for one sex may incur costs for the other. As a consequence, antagonistic coevolution between the sexes often results in a complex arms race between male persistence and female resistance. Coercive mating (e.g., forced copulation) likely benefits males by increasing the probability of mating; however, costs to females may be high, including injury or even death. Here, we report on a study of the use of fangs by males of the wolf spider Schizocosa ocreata (Hentz) during forcible mating with resistant females, which results in hemolymph loss and scar tissue formation in females. Microscopic inspection revealed that fang wounds (evidenced by scar tissue) were absent on unmated (virgin) females but were found on mated females and were significantly more frequent in coercively mated females. Experimental fang immobilization studies found no difference in copulation success between experimental (fangs immobilized) and control (sham manipulation) males. However, males that had use of their fangs had significantly longer copulation duration. These findings represent a previously unknown male mating tactic in spiders and an unrecognized potential cost of mating for female spiders.     

Underwater and above-water search patterns of an Arctic seabird: reduced searching at small spatiotemporal scales

How predators vary search patterns in response to prey predictability is poorly known. For example, marine invertebrates may be predictable but of low energy value, while fish may be of higher energy value but unpredictable at large (pelagic schools) or small (solitary benthics) spatial scales. We investigated the search patterns of the thick-billed murre (Uria lomvia), an Arctic seabird feeding on invertebrates, pelagic fish, or benthic fish. Foraging ranges at the Coats Island colony are generally smaller (<240 min per trip) than at larger colonies, and many birds specialize in foraging tactics and diet. Underwater search times for benthic fish were higher than for pelagic fish or invertebrates while above-water search times for pelagic fish were higher than for benthic fish or invertebrates. There were few stops during trips. Total trip time, flying time, number of flights, and number of dives were intercorrelated and increased with prey energy content, suggesting that longer trips involved fewer prey encounters due to selection of higher-quality, but rarer, prey items. Flight times were not Lévy-distributed and seabirds may have used area-restricted searches. The high degree of specialization, apparent absence of information center effects, and reduced above-water searching times may be linked to the relatively small colony size and the resulting short commuting distances to feeding areas, leading to greater prey predictability. We concluded that prey predictability over various scales affected predator search patterns.     

Estimation of urban sensible heat flux using a dense wireless network of observations

The determination of the sensible heat flux over urban terrain is challenging due to irregular surface geometry and surface types. To address this, in 2006–07, a major field campaign (LUCE) took place at the école Polytechnique Fédérale de Lausanne campus, a moderately occupied urban site. A distributed network of 92 wireless weather stations was combined with routine atmospheric profiling, offering high temporal and spatial resolution meteorological measurements. The objective of this study is to estimate the sensible heat flux over the built environment under convective conditions. Calculations were based on Monin–Obukhov similarity for temperature in the surface layer. The results illustrate a good agreement between the sensible heat flux inferred from the thermal roughness length approach and independent calibrated measurements from a scintillometer located inside the urban canopy. It also shows that using only one well-selected station can provide a good estimate of the sensible heat flux over the campus for convective conditions. Overall, this study illustrates how an extensive network of meteorological measurements can be a useful tool to estimate the sensible heat flux in complex urban environments.     

Change in zooxanthellae and mucocyte tissue density as an adaptive response to environmental stress by the coral, <Emphasis Type="Italic">Montastraea annularis</Emphasis>

Results from controlled in situ experimentation conducted on the leeward reef tract of Curaçao, Netherlands Antilles, indicate that the coral Montastraea annularis exhibits a complex, yet consistent, cellular response to increasing sea surface temperature (SST) and decreasing irradiance. This was determined by simultaneously quantifying and tracking the tissue density of zooxanthellae and mucocytes using a novel technique that integrates the lectin histochemical stain wheat germ agglutinin (WGA) with high-resolution (200 nm) optical epifluorescence microscopy. Coral colonies growing at 6-m water depth (WD) and an irradiance of 100.2 ± 6.5 μmol m^?2 s^?1 were treated with a shading experiment for 11 days that reduced irradiance to 34.9 ± 6.6, 72.0 ± 7.0 and 90.1 ± 4.2 μmol m^?2 s^?1, respectively. While a significant decrease in the density of both zooxanthellae and mucocytes were observed at all shade levels, the largest reduction occurred between the natural non-shaded control (44,298 ± 3,242 zooxanthellae cm^?2; 4,853 ± 346 mucocytes cm^?2) and the highest shading level (13,982 ± 1,961 zooxanthallae cm^?2; 2,544 ± 372.9 mucocytes cm^?2). Colonies were also sampled during a seasonal increase in SST of 1.5°C, where the density of zooxanthellae was significantly lower (from 54,710 ± 1,755 to 34,322 ± 2,894 cells cm^?2) and the density of mucocytes was significantly higher (from 6,100 ± 304 to 29,658 ± 3,937 cells cm^?2). These observations of coral cellular response to environmental change provide evidence to support new hypotheses for coral survival and the complex role played by mucus in feeding, microbial associations and resilience to increasing SST.     

Detection of nitro-polycyclic aromatic hydrocarbons in mainstream and sidestream tobacco smoke using electron monochromator-mass spectrometry

For the first time, we show the presence of nitro substituted naphthalenes in both mainstream and sidestream tobacco smoke using electron monochromator-mass spectrometry. Only one mainstream smoke sample showed the presence of 1-nitronaphthalene (1-NN) at 20 pg/cigarette, while all of the sidestream smoke samples showed the presence of 1-NN at levels ranging from 0.40 to 0.60 ng/cigarette and 2-NN at quantities ranging from 1 to 2 ng/cigarette. Additionally, these levels showed a ratio of ~1:3 for 1-NN to 2-NN which demonstrates that the formation of 2-NN is favored under sidestream combustion conditions. No larger ring structure (>2) nitro-aromatics were identified.     

Identifizierung toxischer Verbindungen in Sedimenten: Ansätze zur Integration von Wirkung und Bioverfügbarkeit

Sediments play an important role for aquatic ecosystem functions. However, they also act as sink, storage and source of lipophilic toxicants and metals. Effect-directed analysis (EDA) is a powerful tool to identify compounds causing adverse effects. In order to avoid misinterpretations and biased prioritization bioavailability needs to be considered together with effects. Bioavailability is a complex process finally resulting in the transfer of a so far particle bound molecule to the target location within the organism where it causes an effect. In order to operationalize this concept for EDA it can be divided into several partial processes. These include desorption from sediments and thus bioaccessibility, equilibrium partitioning of desorbable compounds between sediment, water and organisms driven by activity, and toxicological bioavailability as a result of toxicokinetics including resorption, transport, metabolization and excretion. Bioaccessibility is based on desorption kinetics and can be simulated with mild extraction methods e.?g. using TENAX. Equilibrium partitioning can be simulated with partition-based dosing techniques. First results with these approaches indicate that consideration of bioavailability increases the significance of polar sediment-associated toxicants relative to classical non-polar contaminants such as polycyclic aromatic hydrocarbons.