Mitochondrial gene variation in Mercenaria clam sibling species reveals a relict secondary contact zone in the western Gulf of Mexico

We investigated phylogeographic relationships among American Mercenaria taxa by assessing variation in a 444 nucleotide fragment of the mitochondrial 16S ribosomal gene in clams sampled from four representative sites in January to November 1994. Three of these sites were in the Gulf of Mexico, one was on the Atlantic coast in South Carolina. Direct sequencing of this amplified gene fragment in 85 individuals revealed 21 haplotypes. Phylogenetic analyses consistently resolved this variation into three well supported clades, and within-clade genetic divergence levels were markedly lower than among-clade values. One of the clades, A, was taxon-specific, in that it solely and exclusively contained specimens of M. mercenaria (Linnaeus, 1758) sampled in South Carolina. The other two clades, B and C, were the most divergent and both encompassed specimens of M. campechiensis (Gmelin, 1791) and of M. campechiensis texana (Dall, 1902), sampled from the three Gulf of Mexico sites. Clade B was found at high frequencies at all three Gulf sites, whereas Clade C occurred at low frequencies at two western Gulf sites. We interpret this pattern as resulting from the secondary contact and introgression of two allopatrically differentiated Mercenaria taxa in the western Gulf of Mexico. Clade C haplotypes may represent relict mitochondrial lineages from original Gulf Mercenaria spp. populations that predate massive mitochondrial introgression by M. campechiensis. We further propose that the M. campechiensis texana nuclear genome is a mosaic, heavily weighted toward M. campechiensis, but containing some relict alleles inherited from the precontact population, especially those governing shell characteristics, which may be adaptive in cohesive sediments of bays and estuaries in the northwestern Gulf of Mexico.     

Inhibition of larval settlement to a soft bottom benthic community by drifting algal mats: An experimental test

The hypothesis that drifting red algal mats inhibit settlement of planktonic larvae was tested in a field experiment in 1986. Substratum free of algae (caged boxes) was compared with substratum covered with algae (natural substratum and open boxes). Whereas settling densities of 1500 to 5500 ind. m^-2 of the bivalves Macoma balthica, Cardium glaucum and Mya arenaria were observed in sediment without algal cover, no recruits of the same species were found beneath the algae during the period of peak settlement (June to July). The same difference was observed for the polychaete Nereis diversicolor, although in this case occasional individuals were found beneath the algae. The results demonstrate that algae mats may be efficient inhibitors of larval settlement to benthic soft-substratum communities. It is concluded that algae act as a larval filter.     

Traditional Ecological Knowledge Trends in the Transition to a Market Economy: Empirical Study in the Doñana Natural Areas

Abstract: Researchers and conservation managers largely agree on the relevance of traditional ecological knowledge for natural resource management in indigenous communities, but its prevalence and role as societies modernize are contested. We analyzed the transmission of traditional knowledge among rural local people in communities linked to protected areas in Doñana, southwestern Spain. We studied changes in knowledge related to local practices in agriculture and livestock farming among 198 informants from three generations that cover the period in which the area transited from an economy strongly dependent on local ecosystem services to a market economy with intensified production systems. Our results suggest an abrupt loss of traditional agricultural knowledge related to rapid transformations and intensification of agricultural systems, but maintenance of knowledge of traditional livestock farming, an activity allowed in the protected areas that maintains strong links with local cultural identity. Our results demonstrate the potential of protected areas in protecting remaining bodies of traditional ecological knowledge in developed country settings. Nevertheless, we note that strict protection in cultural‐landscape‐dominated areas can disrupt transmission of traditional knowledge if local resource users and related practices are excluded from ecosystem management.     

Survival and bioturbation of the amphipod Monoporeia affinis in sulphide-rich sediments

Laboratory experiments were conducted to investigate the survival rate of Monoporeia affinis in sulphide-rich sediment with oxic overlying water, and the effect of amphipod bioturbation on sulphide and oxygen profiles. As long as the oxygen content in the water is high, the amphipods seem to avoid quite high concentrations (>200 μmol l⁻¹) of sulphide in the sediment by creating microhabitats where sulphide is rapidly oxidised. In cores with amphipods, a decrease of sulphide concentration was found in upper layers, while an increase of sulphide was found in deeper layers. Aggregation of amphipods generated pockets of light-brown sediment, characterised by high oxygen concentrations and no sulphide, and their depth was clearly dependent on amphipod density. This indicates that M. affinis has a potential to recolonise sulphide-rich sediments, devoid of macroscopic life, after the overlying water column has become oxygenated. Received: 13 April 2000 / Accepted: 8 September 2000     

A Phylogenetic Approach to Conserving Amazonian Biodiversity

Abstract: Amazonia is a highly threatened rainforest that encompasses a major proportion of Earth's biological diversity. Our main goal was to establish conservation priorities for Amazonia's areas of endemism on the basis of measures of evolutionary distinctiveness. We considered two previously identified sets of areas of endemism. The first set consisted of eight large areas used traditionally in biogeographical studies: Belém, Tapajós, Xingu, Guiana, Rondônia, Imeri, Inambari, and Napo. The second set consisted of 16 smaller areas that were subdivisions of the larger areas. We assembled a data set of 50 phylogenies that represented 16 orders and 1715 distributional records. We identified priority conservation areas for the areas of endemism according to node‐based metrics of evolutionary distinctiveness. We contrasted these results with priority areas identified on the basis of raw species richness and species endemicity. For the larger areas, we identified Guiana and Inambari as the first‐ and second‐most important areas for conservation. The remaining areas in this first group scored half (e.g., Napo) or less than Guiana and Inambari on all indices. For the smaller areas, a subdivision of Guiana (i.e., Guyana and the Brazilian states of Roraima and Amazonas) was at the top of the ranking and was followed by a subdivision of Inambari (i.e., northwestern portion of Amazonas) and then another subdivision of Guiana (i.e., Suriname, French Guiana, and the Brazilian state of Amapá). The distinctiveness‐based rankings of the priority of areas correlated directly with those derived from species richness and species endemicity. Current conservation strategies in Amazonia, although they rely on many other criteria apart from phylogeny, are focusing on the most important areas for conservation we identified here.     

Phytoavailability and Fractions of Iron and Manganese in Calcareous Soil Amended with Composted Urban Wastes

Little is known about the effects of applying composted urban wastes on the phytoavailability and distribution of iron (Fe) and manganese (Mn) among chemical fractions in soil. In order to study this concern several experiments in pots containing calcareous soil were carried out. The received treatments by adding separately two rates (20 and 80 Mg ha^?1) of municipal solid waste (MSW) compost and/or municipal solid waste and sewage sludge (MSW-SS) co-compost. The cropping sequence was a lettuce crop followed by a barley crop. It was observed that treatments amended with composted urban wastes tended to promote slight increases in lettuce yield compared to the control. The highest Fe levels in lettuce were found when higher rates of MSW-SS co-compost were applied; these values were significant compared to those obtained in the other treatments. In all cases, the application of organic materials increased the concentration and uptake of Mn in lettuce compared to the control; however, these increases were significant only when higher rates of MSW compost were applied. The organic amendments had beneficial delayed effects on barley yields, showing, in most cases, significant increases compared to the control. In this context, treatments with MSW compost were found to be more effective than the equivalent treatments amended with MSW-SS co-compost. Compared to the control, composted urban wastes increased Fe concentration in straw and rachis, and decreased Fe concentration in barley grain. Similarly, a decreased concentration of Mn in the dry matter of barley crop grown in soils treated with composted urban wastes was observed.     

Consensus on Criteria for Potential Areas for Wolf Reintroduction in Mexico

Abstract: Given the conflict with human interests that in many cases results in the extirpation of large carnivores, acceptance of their reintroduction is a considerable challenge. By the 1980s Mexican wolves (Canis lupus) were extinct in the wild. In 1998 a population was reintroduced in the Blue Range Mountains of New Mexico (U.S.A.). Efforts to reintroduce the species in Mexico have been ongoing since the late 1980s. Four teams working independently identified 6 areas in northern Mexico in the historic range of Mexican wolves, where reintroductions could potentially be successful. Each team used different methods and criteria to identify the areas, which makes it difficult to prioritize among these areas. Therefore, members of the different teams worked together to devise criteria for use in identifying priority areas. They identified areas with high, intermediate, and low potential levels of conflict between wolves and humans. Areas with low potential conflict had larger buffers (i.e., distance from human settlement to areas suitable for wolves) around human settlements than high‐ and intermediate‐conflict areas and thus were thought most appropriate for the first reintroduction. High‐conflict areas contained habitat associated with wolf presence, but were closer to human activity. The first reintroduction of Mexican wolves to Mexico occurred in October 2011 in one of the identified low‐conflict areas. The identification of suitable areas for reintroduction represents a crucial step in the process toward the restoration of large carnivores. Choice of the first reintroduction area can determine whether the reintroduction is successful or fails. A failure may preclude future reintroduction efforts in a region or country.