Biogeography of soil nematodes

Biogeography is the study of distributions of organisms, plus an attempt to explain the distributions. Two approaches to explanation of biogeographic patterns may be termed ecological biogeography and historical biogeography. Most nematologists have taken the ecological approach, with a goal of determining why a particular species is restricted to certain areas, and not present in nearby areas. Historical biogeography is based on the premise that present-day patterns of taxa result largely from the history of the taxa and of the areas of the earth in which they have lived. Nematologists generally adhere to the classic view of dispersal in which a center of origin is postulated and long-range dispersal over barriers is invoked. The dispersal mechanism is often assumed to be man himself. Challenges to this approach exist in the form of methods which infer the biogeographic history from phylogeny. Vicariance biogeographers postulate fragmentation of widespread ancestral biotas, resulting from geological, climatic or other disjunctions, and further allopatric speciation among descendant biotas. Distributions amenable to general explanation can be distinguished from those which require unique dispersal events. Biogeography of soil nematodes is hampered by present limitations in systematics, including our inability to determine species limits with certainty.     

Direct fetal chromosome studies from chorionic villi

An easy and reproducible technique for direct fetal chromosome analysis after chorionic biopsy is described. Very high colchicine concentration and rehydratation of the fixed villi are the two original points of this method.     

The cerebro-hepato-renal (Zellweger) syndrome: Prenatal detection based on impaired biosynthesis of plasmalogens

Prenatal diagnosis of the cerebro-hepato-renal (Zellweger) syndrome has been performed in 10 pregnancies at risk by measuring both the activity of acyl CoA: dihydroxyacetonephosphate acyltransferase (DHAP-AT) and the de novo plasmalogen biosynthesis, either in cultured amniotic fluid cells or in fibroblasts cultured from a chorionic villus biopsy. In 7 of the pregnancies both tests indicated no abnormality. All 7 continued to term and normal infants were delivered. However, in amniotic fluid cells from 2 fetuses affected by Zellweger syndrome unequivocal differences from control values were found. The activity of DHAP-AT was clearly deficient and the de novo plasmalogen biosynthesis was impaired. In one pregnancy at risk prenatal diagnosis was performed during the first trimester by measuring both the DHAP-AT activity and the de novo plasmalogen biosynthesis in fibroblasts cultured from a chorionic villi biopsy. From the deficient DHAP-AT activity and the impaired de novo plasmalogen biosynthesis it was concluded that the fetus was affected. This was confirmed biochemically after induced abortion. It can be concluded that measurement of the DHAP-AT activity and the de novo plasmalogen biosynthesis provides convenient methods for the early prenatal detection of Zellweger syndrome.     

Determination of gaseous polycyclic aromatic hydrocarbons by a simple direct method using thermal desorption–gas chromatography–mass spectrometry

In the last decade, the development of novel analytical methodologies enabled the identification of several environmental pollutants responsible for health problems associated with indoor exposure. Polycyclic aromatic hydrocarbons (PAHs) are among the potential hazardous chemicals present in ambient air. Due to their bioaccumulation potential and carcinogenic/mutagenic effects, 16 PAHs are currently listed as priority air pollutants. The main goal of this work was to implement a new and simple method for sampling and determination of PAHs in air by using a thermal desorption (TD) technique followed by gas chromatography coupled with mass spectrometry analysis. A detailed study was carried out to optimise the experimental method in each of its phases, including (active) sampling, TD and chromatographic analysis. The results demonstrate that this approach allowed the detection and quantification of the six more volatile PAHs, namely, naphthalene, acenaphthylene, acenaphthene, fluorene, phenanthrene, and anthracene. Acceptable precision and good linearity over the explored range were obtained. No carry-over was observed during experimental tests and the method provided a reproducible answer. The applicability of the novel methodology was tested in real environment, namely, on the roof of a building in an urban area, in a domestic kitchen and in a collective car garage. The method enabled the identification of two PAHs in the field samples, specifically, naphthalene (two rings) and phenanthrene (three rings). With regard to PAHs sample composition, the most abundant PAH found, in the three different locations, was naphthalene, accounting for about 84–100 % of the total PAH mass detected.     

Changes in the trade in native medicinal plants in Brazilian public markets

Plants continue to be an important source of new bioactive substances. Brazil is one of the world’s mega-diverse countries, with 20 % of the world’s flora. However, the accelerated destruction of botanically rich ecosystems has contributed to a gradual loss of native medicinal species. In previous study, we have observed a fast and intensive change in trade of medicinal plants in an area of Amazon, where human occupation took place. In this study, we surveyed 15 public markets in different parts of Brazil in search of samples of 40 plants used in traditional medicine and present in first edition of Brazilian Official Pharmacopoeia (FBRAS), published in 1926. Samples of plants commercialized as the same vernacular name as in Pharmacopoeia were acquired and submitted to analysis for authentication. A total of 252 plant samples were purchased, but the laboratory analyses showed that only one-half of the samples (126, 50.2 %) were confirmed as the same plant species so named in FBRAS. The high number of unauthenticated samples demonstrates a loss of knowledge of the original native species. The proximity of the market from areas in which the plant occurs does not guarantee that trade of false samples occurs. The impact of the commerce of the substitute species on their conservation and in public health is worrying. Strategies are necessary to promote the better use and conservation of this rich heritage offered by Brazilian biodiversity.     

Distribution of radionuclides in surface soils, Singhbhum Shear Zone, India and associated dose

Gamma emitters were estimated in surface soils from a mineralized zone in Eastern India using high purity Germanium detector-based high resolution gamma spectrometry system. Activities of ²³⁸U, ²²⁶Ra, ²³²Th, ²³⁵U, ²²⁷Th, ^234mPa, ²¹⁰Pb, ⁴⁰K, and ¹³⁷Cs were 79?±?50, 81?±?53, 65?±?23, 4?±?2, 5?±?4, 92?±?50, 97?±?45, 517?±?201, and 4?±?2 Bq/kg, respectively. Most radionuclides were observed to follow log-normal distribution. The correlation between physicochemical properties of the samples, like pH, organic matter content, particle size, and moisture content were also studied. Activity ratios of ²²⁶Ra/²³⁸U, ²¹⁰Pb/²²⁶Ra, and ²²⁷Th/²³⁵U indicated deviation from secular equilibrium in some samples. The associated annual effective dose ranged from 0.07 to 0.24 mSv and the mean was calculated to be 0.12?±?0.04 mSv for this region, indicating it to be one of normal natural background radiation.     

Status and effect of pesticide residues in soils under different land uses of Andaman Islands, India

Pesticides are shown to have a great effect on soil organisms, but the effect varies with pesticide group and concentration, and is modified by soil organic carbon content and soil texture. In the humid tropical islands of Andaman, India, no systematic study was carried out on pesticide residues in soils of different land uses. The present study used the modified QuEChERS method for multiresidue extraction from soils and detection with a gas chromatograph. DDT and its various metabolites, α-endosulfan, β-endosulfan, endosulfan sulfate, aldrin, and fenvalerate, were detected from the study area. Among the different pesticide groups detected, endosulfan and DDT accounted for 41.7 % each followed by aldrin (16.7 %) and synthetic pyrethroid (8.3 %). A significantly higher concentration of pesticide residues was detected in rice–vegetable grown in the valley followed by rice–fallow and vegetable–fallow in the coastal plains. Soil microbial biomass carbon is negatively correlated with the total pesticide residues in soils, and it varied from 181.2 to 350.6 mg?kg^?1. Pesticide residues have adversely affected the soil microbial populations, more significantly the bacterial population. The Azotobacter population has decreased to the extent of 51.8 % while actinomycetes were the least affected though accounted for 32 % when compared to the soils with no residue.     

Effect of a reservoir in the water quality of the Reconquista River, Buenos Aires, Argentina

The lower portion of the Reconquista River is highly polluted. However, little is known about the state of the high and middle basins. The aims of this work were to assess the water quality on the high and middle Reconquista River basins and to determinate if the presence of a reservoir in the river has a positive effect on the water quality. We conducted a seasonal study between August 2009 and November 2010 at the mouth of La Choza, Durazno, and La Horqueta streams at the Roggero reservoir—which receives the water from the former streams—at the origin of the Reconquista River and 17 km downstream from the reservoir. We measured 25 physical and chemical parameters, including six heavy metal concentrations, and performed a multivariate statistical analysis to summarize the information and allow the interpretation of the whole data set. We found that the Durazno and La Horqueta streams had better water quality than La Choza, and the presence of the reservoir contributed to the improvement of the water quality, allowing oxygenation of the water body and processing of organic matter and ammonia. The water quality of the Reconquista River at its origin is good and similar to the reservoir, but a few kilometers downstream, the water quality declines as a consequence of the presence of industries and human settlements. Therefore, the Roggero reservoir produces a significant improvement of water quality of the river, but the discharge of contaminants downstream quickly reverses this effect.