Use of tracer tests to investigate changes in flow and transport properties due to bioclogging of porous media

Tracer tests were conducted in three laboratory columns to study changes in the hydraulic properties of a porous medium due to bioclogging. About 30 breakthrough curves (BTCs) for each column were obtained. The BTCs were analyzed using analytical equilibrium and dual-porosity models, and estimates of the hydrodynamic dispersion and mass transfer coefficients were obtained by curve fitting. The change in transport properties developed in three stages: an initial phase (I) with no significant changes in transport properties, phase II with growth of biomass near the inlet of the columns causing changes in dispersivity, and phase III with added growth of micro-colonies deeper in the columns causing mass transfer of solutes from the water phase to the biophase. Tracer transport changed from being uniform to more non-uniform with increase in mass transfer of the tracer between the mobile phase and the immobile biomass. An increase in the bulk dispersivity value of up to one order of magnitude was observed. Numerical simulations suggest that local dispersivity values may be as much as 40 times higher in the more severe clogged areas inside the column. The bulk hydraulic conductivities of the columns decreased by up to three orders of magnitude. The hydraulic conductivity and dispersivity parameters were almost recovered after disinfection of the columns. Different models relating the changes of the hydraulic conductivity to the changes in the mobile porosity due to bioclogging were reviewed, and the micro-colony relation of Thullner et al. [Thullner, M., Zeyer, J., Kinzelbach, W., 2002. Influence of microbial growth on hydraulic properties of pore networks, Transport in Porous Media, 49, 99-122.] was found to best describe the relation between the bulk hydraulic parameters.     

A schematic sampling protocol for contaminant monitoring in raptors

Birds of prey, owls and falcons are widely used as sentinel species in raptor biomonitoring programmes. A major current challenge is to facilitate large-scale biomonitoring by coordinating contaminant monitoring activities and by building capacity across countries. This requires sharing, dissemination and adoption of best practices addressed by the Networking Programme Research and Monitoring for and with Raptors in Europe (EURAPMON) and now being advanced by the ongoing international COST Action European Raptor Biomonitoring Facility. The present perspective introduces a schematic sampling protocol for contaminant monitoring in raptors. We provide guidance on sample collection with a view to increasing sampling capacity across countries, ensuring appropriate quality of samples and facilitating harmonization of procedures to maximize the reliability, comparability and interoperability of data. The here presented protocol can be used by professionals and volunteers as a standard guide to ensure harmonised sampling methods for contaminant monitoring in raptors.Electronic supplementary materialThe online version of this article (10.1007/s13280-020-01341-9) contains supplementary material, which is available to authorized users.     

Perfluorinated and chlorinated pollutants as predictors of demographic parameters in an endangered seabird

Despite global occurrence of several perfluorinated compounds (PFCs) the potential ecological effects of such substances on natural populations are not known. In endangered lesser black-backed gulls (Larus fuscus fuscus) on the Norwegian Coast, the blood concentrations of PFCs were as high as legacy organochlorines (OCs), and here we examined whether PFCs show associations similar to those of OCs to factors potentially affecting population growth, by evaluating relationships between contaminant concentrations and demographic parameters (reproductive performance and the probability of adults returning between breeding seasons). PFCs were not adversely associated with demographic parameters, while the most persistent OCs; notably PCB and p,p′-DDE, were adversely associated with early chick survival, and adult return rate. This study thus suggests that when the concentrations of PFCs and OCs are of similar magnitude in a gull population, OCs are more likely to cause adverse ecological effects.     

Climate change stimulates the growth of the intertidal macroalgae <Emphasis Type="Italic">Ascophyllum nodosum</Emphasis> near the northern distribution limit

Ascophyllum nodosum is a foundation macroalgae of the intertidal zone that distributes across latitude 41.3–69.7°N. We tested the hypothesis that growth of A. nodosum near the northern distribution edge increases with warming. We retrospectively quantified the growth of eight A. nodosum populations at West Greenland and North Norway (from 64°N to 69°N). For seven populations, we measured growth rates since 1997–2002 and for one of them we extended the time series back to 1956 using published estimates. Individuals at northern populations elongated between 2.0 and 9.1 cm year^?1 and this variability correlated with temperature and annual ice-free days. A spatial comparison of A. nodosum growth across the species distribution range showed that Northern (and coldest) populations grew at the slowest rates. Our results demonstrate that arctic climate change enhances the growth of A. nodosum populations and suggest that their productivity may increase in response to projected global warming.     

Assessing reference conditions according to the European Water Framework Directive using modelling and analysis of historical data: an example from Randers Fjord,Denmark

The European Water Framework Directive (WFD) requires the definition of reference conditions, i.e. pristine conditions, for all surface waters. As the present state of Danish coastal waters cannot be referred to as pristine, reference conditions have to be assessed by analysis of historical data or by the use of models. Using Randers Fjord as an example, the aim of this work was i) to demonstrate possibilities and restrictions of assessing reference conditions by historical data and by modelling; and ii) to demonstrate how ecological conditions have changed along with eutrophication. The ample historical data from Randers Fjord allowed us to assess reference conditions with respect to benthic macrophytes and benthic fauna. Models of varying complexity enabled us to assess reference conditions for nutrients, chlorophyll a, Secchi depth, and eelgrass. We conclude that models can be a useful supplement to assess reference conditions, though they are presently restricted by the lack of quantitative links between eutrophication and species composition.     

Noninvasive prenatal screening for cystic fibrosis using circulating trophoblasts: Detection of the 50 most common disease-causing variants

Objectives

Cystic fibrosis (CF) is one of the most common severe autosomal recessive disorders. Prenatal or preconception CF screening is offered in some countries. A maternal blood sample in early pregnancy can provide circulating trophoblasts and offers a DNA source for genetic analysis of both the mother and the fetus. This study aimed to develop a cell-based noninvasive prenatal test (NIPT) to screen for the 50 most common CF variants.

Methods

Blood samples were collected from 30 pregnancies undergoing invasive diagnostics and circulating trophoblasts were harvested in 27. Cystic fibrosis testing was conducted using two different methods: by fragment length analysis and by our newly developed NGS-based CF analysis.

Results

In all 27 cases, cell-based NIPT provided a result using both methods in agreement with the invasive test result.

Conclusion

This study shows that cell-based NIPT for CF screening provides a reliable result without the need for partner- and proband samples.