Mineral licks: motivational factors for visitation and accompanying disease risk at communal use sites of elk and deer

Free-ranging cervids acquire most of their essential minerals through forage consumption, though occasionally seek other sources to account for seasonal mineral deficiencies. Mineral sources occur as natural geological deposits (i.e., licks) or as anthropogenic mineral supplements. In both scenarios, these sources commonly serve as focal sites for visitation. We monitored 11 licks in Rocky Mountain National Park, north-central Colorado, using trail cameras to quantify daily visitation indices (DVI) and soil consumption indices (SCI) for Rocky Mountain elk (Cervus elaphus) and mule deer (Odocoileus hemionus) during summer 2006 and documented elk, mule deer, and moose (Alces alces) visiting licks. Additionally, soil samples were collected, and mineral concentrations were compared to discern levels that explain rates of visitation. Relationships between response variables; DVI and SCI, and explanatory variables; elevation class, moisture class, period of study, and concentrations of minerals were examined. We found that DVI and SCI were greatest at two wet, low-elevation licks exhibiting relatively high concentrations of manganese and sodium. Because cervids are known to seek Na from soils, we suggest our observed association of Mn with DVI and SCI was a likely consequence of deer and elk seeking supplemental dietary Na. Additionally, highly utilized licks such as these provide an area of concentrated cervid occupation and interaction, thus increasing risk for environmental transmission of infectious pathogens such as chronic wasting disease, which has been shown to be shed in the saliva, urine, and feces of infected cervids.     

Comparison of methods for determining key marine areas from tracking data

There is an urgent need to identify key marine areas for conservation, particularly in the high seas. A range of techniques have been applied to tracking data from higher predators, particularly seabirds and pinnipeds, to determine the areas of greatest use. This study compared three commonly used methods—kernel, first-passage time and state-space modelling—and a new approach, minimum displacement rate, for the analysis of data from the wandering albatross Diomedea exulans of Bird Island, South Georgia, tracked during the chick-rearing period. Applied to a single track, these four models identified similar marine areas as important. The greatest similarity in areas identified occurred when model assumptions were shared (such as slow speed indicating spatial preference) even when methods modelled these assumptions differently (e.g. Bayesian inference versus cumulative density surface). A gridded overlap approach applied to all tracks revealed core areas not apparent from results of any single analysis. The gridded approach also revealed spatial overlap between methods based on different assumptions (e.g. minimum displacement rate and kernel analysis) and between individuals. Although areas identified as important by kernel and first-passage time analysis of a single track were biased towards resting locations during darkness, this does not negate the requirement for their protection. Using the gridded overlap approach, two distinct core regions were identified for the wandering albatross; one close to the breeding colony and another 800 km to the North–West in the high seas. This convenient and pragmatic approach could be applied to large data sets and across species for the identification of a network of candidate marine protected areas in coastal and pelagic waters.     

Biological impacts of ocean acidification: a postgraduate perspective on research priorities

Research into the effects of ocean acidification (OA) on marine organisms has greatly increased during the past decade, as realization of the potential dramatic impacts has grown. Studies have revealed the multifarious responses of organisms to OA conditions, indicating a high level of intra- and interspecific variation in species’ ability to accommodate these alterations. If we are to provide policy makers with sound, scientific input regarding the expected consequences of OA, we need a broader understanding of these predicted changes. As a group of 20 multi-disciplinary postgraduate students from around the globe, with a study focus on OA, we are a strong representation of ‘next generation’ scientists in this field. In this unique cumulative paper, we review knowledge gaps in terms of assessing the biological impacts of OA, outlining directions for future research.     

Experimental tree removal in tallgrass prairie: variable responses of flora and fauna along a woody cover gradient

Woody plant encroachment is a worldwide phenomenon in grassland and savanna systems whose consequence is often the development of an alternate woodland state. Theoretically, an alternate state may be associated with changes in system state variables (e.g., species composition) or abiotic parameter shifts (e.g., nutrient availability). When state-variable changes are cumulative, such as in woody plant encroachment, the probability of parameter shifts increases as system feedbacks intensify over time. Using a Before-After Control-Impact (BACI) design, we studied eight pairs of grassland sites undergoing various levels of eastern redcedar (Juniperus virginiana) encroachment to determine whether responses of flora and fauna to experimental redcedar removal differed according to the level of pretreatment redcedar cover. In the first year after removal, herbaceous plant species diversity and evenness, woody plant evenness, and invertebrate family richness increased linearly with pretreatment redcedar cover, whereas increases in small-mammal diversity and evenness were described by logarithmic trends. In contrast, increases in woody plant diversity and total biomass of terrestrial invertebrates were accentuated at levels of higher pretreatment cover. Tree removal also shifted small-mammal species composition toward a more grassland-associated assemblage. During the second year postremoval, increases in herbaceous plant diversity followed a polynomial trend, but increases in most other metrics did not vary along the pretreatment cover gradient. These changes were accompanied by extremely high growing-season precipitation, which may have homogenized floral and faunal responses to removal. Our results demonstrate that tree removal increases important community metrics among grassland flora and fauna within two years, with some responses to removal being strongly influenced by the stage of initial encroachment and modulated by climatic variability. Our results underscore the importance of decisive management for reversing the effects of woody plant encroachment in imperiled grassland ecosystems.     

Social chemistry

This article is both an essay to propose social chemistry as a new scientific discipline and a preface of the books Environmental Chemistry for a Sustainable World. Environmental chemistry is a fast emerging discipline aiming at the understanding the fate of pollutants in ecosystems and at designing novel processes that are safe for ecosystems. Past pollution should be cleaned, and future pollution should be predicted and avoided (Lichtfouse et al. 2005a). Such advices are still not applied by humans as demonstrated by the Fukushima nuclear event and global warming. Human errors are repeatable. We therefore suggest a possible solution, which involves bridging chemistry and society by integrating social sciences in chemical research. In particular, citizen discourse analysis should be useful to design chemicals that are both innovative and accepted by society. Then, we present the recent success of environmental chemistry through the foundation of the Association of Chemistry and the Environment; the increase in the impact factor of Environmental Chemistry Letters from 0.814 in 2006 to 2.109 in 2009; and over 35,000 chapter downloads of the book Environmental Chemistry. Lastly, we highlight major topics of the new book series Environmental Chemistry for a Sustainable World (Lichtfouse et al. 2011a, b). The two first volumes are entitled Nanotechnology and Health Risk, and Remediation of Air and Water Pollution.     

Fast and complete removal of the 5-fluorouracil drug from water by electro-Fenton oxidation

Cytostatic drugs are a troublesome class of emerging pollutants in water owing to their potential effects on DNA. Here we studied the removal of 5-fluorouracil from water using the electro-Fenton process. Galvanostatic electrolyses were performed with an undivided laboratory-scale cell equipped with a boron-doped diamond anode and a carbon felt cathode. Results show that the fastest degradation and almost complete mineralization was obtained at a Fe²⁺ catalyst concentration of 0.2 mM. The absolute rate constant for oxidation of 5-fluorouracil by hydroxyl radicals was 1.52 × 10⁹ M^?1 s^?1. Oxalic and acetic acids were initially formed as main short-chain aliphatic by-products, then were completely degraded. After 6 h the final solution mainly contained inorganic ions (NH₄ ⁺, NO₃ ^? and F^?) and less than 10% of residual organic carbon. Hence, electro-Fenton constitutes an interesting alternative to degrade biorefractory drugs.     

Publishing science without results and recycling research

Most scientists focus too much on publishing original articles. In doing so, scientists are restricting their writing skills to this form of highly specialised publication, which is poorly readable by scientists from other disciplines. In the context of rising interdisciplinary research and data abundance, there is a need for more publications that recycle existing research and communicate to a wider audience. Therefore, I present here five types of publications that do not require additional experiments, namely reviews, methods, data papers, meta-analyses and videos. Benefits include more citations, larger visibility, wider dissemination, easier job finding, grant success and better recycling of research.     

Climate change threatens polar bear populations: a stochastic demographic analysis

The polar bear (Ursus maritimus) depends on sea ice for feeding, breeding, and movement. Significant reductions in Arctic sea ice are forecast to continue because of climate warming. We evaluated the impacts of climate change on polar bears in the southern Beaufort Sea by means of a demographic analysis, combining deterministic, stochastic, environment-dependent matrix population models with forecasts of future sea ice conditions from IPCC general circulation models (GCMs). The matrix population models classified individuals by age and breeding status; mothers and dependent cubs were treated as units. Parameter estimates were obtained from a capture-recapture study conducted from 2001 to 2006. Candidate statistical models allowed vital rates to vary with time and as functions of a sea ice covariate. Model averaging was used to produce the vital rate estimates, and a parametric bootstrap procedure was used to quantify model selection and parameter estimation uncertainty. Deterministic models projected population growth in years with more extensive ice coverage (2001-2003) and population decline in years with less ice coverage (2004-2005). LTRE (life table response experiment) analysis showed that the reduction in lambda in years with low sea ice was due primarily to reduced adult female survival, and secondarily to reduced breeding. A stochastic model with two environmental states, good and poor sea ice conditions, projected a declining stochastic growth rate, log lambdas, as the frequency of poor ice years increased. The observed frequency of poor ice years since 1979 would imply log lambdas approximately - 0.01, which agrees with available (albeit crude) observations of population size. The stochastic model was linked to a set of 10 GCMs compiled by the IPCC; the models were chosen for their ability to reproduce historical observations of sea ice and were forced with "business as usual" (A1B) greenhouse gas emissions. The resulting stochastic population projections showed drastic declines in the polar bear population by the end of the 21st century. These projections were instrumental in the decision to list the polar bear as a threatened species under the U.S. Endangered Species Act.     

Foliar fungal pathogens and grassland biodiversity

By attacking plants, herbivorous mammals, insects, and belowground pathogens are known to play an important role in maintaining biodiversity in grasslands. Foliar fungal pathogens are ubiquitous in grassland ecosystems, but little is known about their role as drivers of community composition and diversity. Here we excluded foliar fungal pathogens from perennial grassland by using fungicide to determine the effect of natural levels of disease on an otherwise undisturbed plant community. Importantly, we excluded foliar fungal pathogens along with rabbits, insects, and mollusks in a full factorial design, which allowed a comparison of pathogen effects along with those of better studied plant enemies. This revealed that fungal pathogens substantially reduced aboveground plant biomass and promoted plant diversity and that this especially benefited legumes. The scale of pathogen effects on productivity and biodiversity was similar to that of rabbits and insects, but different plant species responded to the exclusion of the three plant enemies. These results suggest that theories of plant coexistence and management of biodiversity in grasslands should consider foliar fungal pathogens as potentially important drivers of community composition.     

Evaluation of a fast response pressure solver for flow around an isolated cube

This work describes and evaluates a pressure solver that has been incorporated into a fast response three-dimensional building-resolving diagnostic wind modeling system. The solver computes the three-dimensional pressure field around buildings and on exterior walls in terms of a coefficient of pressure by solving a simplified pressure Poisson equation (that neglects turbulence stresses in the Navier-Stokes) for incompressible flow. The input to the solver is the three-dimensional mean wind field obtained from a fast response empirical-diagnostic urban wind model. The present study is an evaluation of the pressure solver using wind-tunnel data for flow normal to and at a 45° angle to an isolated cubical building. Results for the normal incident wind angle case indicate that the model satisfactorily reproduces the general spatial patterns and the magnitude of the pressure difference around much of the cube. Details of the flow field that are not satisfactorily predicted include the spatial distribution of pressure on the roof and the lower half of the front side of the building and the magnitude along the sidewalls where pressures are over predicted. The results for the 45° case show reasonable agreement between the model and experiments on the front and the back walls, but over predict pressures on the leading edge of the rooftop. Regions with poor pressure predictions appear to be a result of unsatisfactory mean wind modeling.