Monitoring the transport of biomass burning emissions in South America

The atmospheric transport of biomass burning emissions in the South American and African continents is being monitored annually using a numerical simulation of air mass motions; we use a tracer transport capability developed within RAMS (Regional Atmospheric Modeling System) coupled to an emission model. Mass conservation equations are solved for carbon monoxide (CO) and particulate material (PM2.5). Source emissions of trace gases and particles associated with biomass burning activities in tropical forest, savanna and pasture have been parameterized and introduced into the model. The sources are distributed spatially and temporally and assimilated daily using the biomass burning locations detected by remote sensing. Advection effects (at grid scale) and turbulent transport (at sub-grid scale) are provided by the RAMS parameterizations. A sub-grid transport parameterization associated with moist deep and shallow convection, not explicitly resolved by the model due to its low spatial resolution, has also been introduced. Sinks associated with the process of wet and dry removal of aerosol particles and chemical transformation of gases are parameterized and introduced in the mass conservation equation. An operational system has been implemented which produces daily 48-h numerical simulations (including 24-h forecasts) of CO and PM2.5, in addition to traditional meteorological fields. The good prediction skills of the model are demonstrated by comparisons with time series of PM2.5 measured at the surface.     

Multivariate analysis of the bentho-demersal ichthyofauna along soft bottoms of the Eastern Atlantic: comparison between unvegetated substrates,seagrass meadows and sandy bottoms beneath sea-cage fish farms

By means of multivariate techniques, we studied: (1) the differences in the structure of bentho-demersal, non-cryptic, fish assemblages associated with unvegetated sandy substrates, vegetated meadows constituted by the seagrass Cymodocea nodosa and the bottoms under the influence of sea-cage fish farms; as well as (2) the persistence of these patterns with regard to different scales of spatial variability, across three islands of the Canarian Archipelago (Central East Atlantic). Our sampling strategy (involving three islands, with five locations per island, and two sites within each location) detected significant changes in the composition and structure of the fish assemblages between the three habitats. Fish assemblages associated with the unvegetated and vegetated bottoms were similar among the surveyed islands. In contrast, we observed a significant inter-island variability in the fish populations associated with the sea-cage fish farms. The presence of the sea-cage fish farms increased the overall fish abundance (184.8±49.8 ind 100 m⁻²) as compared to both the vegetated (38.8±9.7 ind 100 m⁻²) and unvegetated habitats (1.1±0.4 ind 100 m⁻²). Differences within and between the habitats were found to be associated with the relative abundance of a few fish species. The most abundant species were Xyrichthys novacula in the unvegetated bottoms and Diplodus annularis, Spondyliosoma cantharus and Mullus surmuletus on the seagrass meadows. Finally, we recorded an increase in the abundance of Heteroconger longissimus, Trachinus draco and Pagellus acarne in the bottoms beneath the sea-cage fish farms. These species, in addition to a group of large benthic chondrichthyes, were responsible for the differences between islands in the composition and structure of the demersal ichthyofauna beneath the sea-cage fish farms.     

On the consortium of the tintinnid <Emphasis Type="Italic">Eutintinnus</Emphasis> and the diatom <Emphasis Type="Italic">Chaetoceros</Emphasis> in the Pacific Ocean

The morphology and distribution of the diatoms Chaetoceros tetrastichon and Ch. dadayi as epiphytes on the loricae of the tintinnids Eutintinnus apertus and E. pinguis investigated in the open waters of the Pacific Ocean. The Eutintinnus–Chaetoceros consortia was encountered in 38 of the 52 sampling stations from 34°N to 33°S, and together were among represented the most wide-spread species. The abundance was low with a maximum of 32 consortia l⁻¹ and E. apertus was often the most abundant species of the genus. The free-living Eutintinnus congeneric species showed a wider vertical distribution, whereas E. apertus–Chaetoceros tended to be near the surface. The success of E. apertus in consortium with Chaetoceros may be due to increase of the clearance rate and/or the lower susceptibility to predation. Chaetoceros modifies its morphology to adapt the epiphytic life, especially Ch. dadayi. The shorter curved setae may facilitate the transfer to the lorica of the daughter tintinnid after the cell division. The free-living Ch. tetrastichon and Ch. dadayi are very rare and Chaetoceros remained attached to empty loricae or encysted tintinnid cells. This suggests that the Eutintinnus–Chaetoceros consortium is obligate for the success of the diatom and renders the tintinnid more competitive versus congeneric species.     

Molecular phylogeny of the American <Emphasis Type="Italic">Callinectes</Emphasis> Stimpson, 1860 (Brachyura: Portunidae), based on two partial mitochondrial genes

The genus Callinectes encompasses 16 species of commercially important swimming crabs. Most (13) occur on the Pacific and Atlantic coasts of the Americas. We compare mtDNA regions corresponding to 964 basepairs of the large (16S) and small (12S) ribosomal subunits among American Callinectes in order to examine phylogenetic relationships. The status of Callinectes affinis Fausto-Filho and Callinectes maracaiboensis Taissoun is questioned, and C. maracaiboensis is concluded to be a junior synonym of Callinectes bocourti A. Milne-Edwards, from which it cannot be consistently distinguished. We find two major lineages, one of which includes C. affinis, C. bocourti, Callinectes rathbunae Contreras, Callinectes sapidus Rathbun, and Callinectes toxotes Ordway. A second lineage is comprised of Callinectes arcuatus Ordway, Callinectes bellicosus (Stimpson), Callinectes danae Smith, Callinectes exasperatus (Gerstaecker), Callinectes larvatus Ordway, Callinectes ornatus Ordway, and Callinectes similis Williams. Definition of these clades is supported by previously described morphological differences in the length of the gonopods and shared physioecological adaptations. A calibrated molecular clock is used to estimate divergence of the two lineages near 13 mybp. Our analyses suggest that C. ornatus is the closest relative of C. arcuatus, and that C. affinis is closest to C. bocourti.     

Daring females,devoted males,and reversed sexual size dimorphism in the sand-dwelling spider <Emphasis Type="Italic">Allocosa brasiliensis</Emphasis> (Araneae,Lycosidae)

Sexual selection theory predicts that a higher investment in offspring will turn females into the selective sex, while males will compete for accessing and courting them. However, there are exceptions to the rule. When males present a high reproductive investment, sex roles can reverse from typical patterns, turning males into the choosy sex, while females locate males and initiate courtship. In many spiders, males are smaller than females, wandering in search of sedentary females and maximizing the number of copulations. In the present study, we present findings on the sand-dwelling wolf spider, Allocosa brasiliensis, evidencing a reversal in typical courtship roles reported for the first time in spiders. Males were bigger than females. Females located males and initiated courtship. Copulation always occurred in male burrows and took place mainly in long burrows. Males donated their burrows to the females after copulation, closing the entrance before leaving with female cooperation from inside. Males would provide females with a secure place for ovipositing, being exposed to predation and diminishing their future mating possibilities until constructing a new burrow. The cost of vacating the burrow and losing the refuge in an unpredictable habitat, such as sand dunes, would explain the courtship roles reversal in this spider species. Results turn A. brasiliensis as a promising model for discussing the determinants of sex roles and the pressures that drive their evolution and maintenance. Electronic supplementary material The online version of this article (doi: ) contains supplementary material, which is available to authorized users.     

Reproductive biology of shovelnose guitarfish <Emphasis Type="Italic">Rhinobatos productus</Emphasis> from the eastern Gulf of California México

Guitarfishes are a primary component of artisanal elasmobranch fisheries and are commonly taken as trawl fishery bycatch throughout the Gulf of California. However, little is known of the life history of this species. To address this lack of critical biological information, the reproductive biology of Rhinobatos productus was investigated in the eastern Gulf of California. Development of claspers and testes indicated that males reach maturity at 53 cm total length (TL). Measurements of oviducal gland, largest ovum diameter, and uterus width indicated that females >57 cm TL are mature. This species possesses two functional ovaries: the ovarian cycle and gestation run concurrently. Histological analysis of oviducal glands did not provide evidence of sperm storage, but females carrying uterine capsules were observed over an extended period, suggesting the possibility of diapause in the early embryonic development. Following 4–5 months of embryonic growth, pups were typically born from late June to October after a gestation period of approximately 11–12 months. Width of yolk sac was inversely related to embryo length. The rate of reduction of yolk sac width suggests that embryos depend on the sac until birth. Mean fecundity was estimated to be 5 (range 1–10, s.d. = 2.24) with a 1:1 sex ratio. Average size at birth was 175 mm TL. Seasonally, gravid females enter shallow waters for parturition, becoming extremely vulnerable to gill nets used in the artisanal ray fishery.     

Non-adaptive adoptions of nestlings in the colonial lesser kestrel: proximate causes and fitness consequences

We examined the causes, costs and benefits of adoption in the altricial lesser kestrel Falco naumanni. Specifically, we tested the intergenerational conflict hypothesis, proposed to explain adoption in some birds. Adoptions involved 76% of the nests and 51% of the nestlings at a mean age of 25 days (12 days before fledging). Nest-switching nestlings were not in poorer body condition, more parasitized or younger than their siblings, and body condition and prey delivery rates of their parents did not differ from those of other parents. In the foster nest, adopted nestlings did not benefit from higher feeding rates or a prolongation of the nestling period. They did not have fewer nest-mates or achieve higher rank within the new brood. Thus, adopted nestlings did not improve their body condition and survival. Adult lesser kestrels seemed unable to finely discriminate beween their own and alien chicks. Foster parents bore the cost of an increase of prey delivery rates, although it did not affect their survival or subsequent reproductive performance. Therefore, our results do not support the intergenerational conflict hypothesis, and suggest that adoption in this species is non-adaptive. Traditionally, the lesser kestrel bred in cliffs where movement among nest-sites was restricted. Nowadays, about half of the colonies are in tiled roofs which facilitate nest-switching by nestlings. The high rate of adoptions may thus be explained as reproductive errors associated with the recent occupation of a new breeding habitat. Received: 3 May 1996 / Accepted after revision: 19 January 1997     

Numerical simulation of scour around pipelines using an Euler–Euler coupled two-phase model

The scour around a long fixed pipeline placed just above a non-cohesive sandy bed is numerically simulated using an Eulerian two-phase model that implements Euler–Euler coupled governing equations for fluid and solid phases and a modified k−ɛ turbulence closure for the fluid phase, the modeling system being a part of the CFD software package FLUENT. Both flow–particle and particle–particle interactions are considered in the model. During the simulations, the interface between sand and water is specified using a threshold volume fraction of sand, and the evolution of the bedforms is studied in detail. The predictions of bedform evolution are in good agreement with previous laboratory measurements. Investigations into the mechanisms of scour reveal that three sediment transport modes (bed-load, suspended-load and laminated-load) are associated with the scour development. While some previously proposed scour development formulae for cylindrical objects are in good general agreement with the simulations, scour prediction based on a commonly used operational mine-burial model (DRAMBUIE) shows disparities with present simulations.     

Transport and Diffusion of Ozone in the Nocturnal and Morning Planetary Boundary Layer of the Phoenix Valley

The evolution of ozone (O ₃) in the nocturnal and morning-transitional planetary boundary layer (PBL) of the Phoenix valley was measured as a part of the `Phoenix Sunrise Experiment 2001' of the U.S. Department of Energy conducted in June 2001. The goal of the field program was to study the transport, distribution and storage of ozone and its precursors in the urban boundary layer over a diurnal cycle. The ground level O <sub>3</sub> as well as mean meteorological variables and turbulence were measured over the entire period, and vertical profiling (using a tethered balloon) was made during the morning transition period. Approximately half of the observational days showed the usual diurnal cycle of high O <sub>3</sub> during the day and low O <sub>3</sub> at night, with nitrogen oxides (NO <sub>x</sub> = NO <sub>2</sub> + NO) showing an out of phase relationship with O <sub>3</sub>. The rest of the days were signified by an anomalous increase of O <sub>3</sub> in the late evening ( 2200 LST), concomitant with a sudden drop of temperature, an enhancement of wind speed and Reynolds stresses, a positive heat flux and a change of wind direction. NO <sub>x</sub> measurements indicated the simultaneous arrival of an `aged' air mass, which was corroborated by the wind predictions of a mesoscale numerical model. In all, the results indicate that the recirculation of O ₃ rich air masses is responsible for the said high-O ₃ events. Such air masses are produced during the transport of O ₃ precursors by the upslope flow toward mountainous suburbs during the day, and they return back to the city at night via downslope winds (i.e. mountain breeze). The corresponding flow patterns, and hence the high-O ₃ events, are determined by background meteorological conditions. The vertical profiling of O ₃ and flow variables during the morning transition points to a myriad of transport, mixing and chemical processes that determine the fate of tropospheric O ₃. How well such processes are incorporated and resolved in predictive O ₃ models should determine the accuracy of their predictions.