Assessment of groundwater quality by means of self-organizing maps: application in a semiarid area

The Kohonen neural network was applied to hydrochemical data from the Detritic Aquifer of the Lower Andarax, situated in a semiarid zone in the southeast of Spain. An activation map was obtained for each of the sampling points, in which the spatial distribution of the activated neurons indicated different water qualities. To extract the information contained in the activation maps, they were divided into nine quadrats. Cartesian coordinates were assigned to each quadrant (x, y), and for each sampling point, three derived variables were selected, which were assigned the values x and y of the corresponding quadrat. A classification was defined based on this simple matrix system which allows an easy and rapid means of evaluating the water quality. This assessment highlights the various processes that affect groundwater quality. The method generates output that is easier to interpret than from traditional statistical methods. The information is extracted from the activation maps without significant loss of information. The method is proposed for assessing water quality in hydrogeochemically complex areas, where large numbers of observations are made.     

Effects of Management on Understory Diversity in the Forest Ecosystems of Northern Spain

Pine plantations are an alternative to marginal agriculture in many countries, and are often presented as an option that improves biodiversity. However, these plantations can have adverse environmental effects if improperly managed. To evaluate the effect of forest management practices on biodiversity, the diversity, species richness, dominance and frequency of understory woody plant species in different forests of the Basque Country (northern Spain) were compared. Plantations of exotic conifers (Pinus radiata [D.] Don) of different ages were compared with deciduous forests of Quercus robur L. and Fagus sylvatica L. The effects of different types and intensities of management were taken into account. The differences observed were mainly conditioned by the intensity of forestry management, although the response varied according to forest type and age. In unmanaged pine plantations, the diversity and species richness of the understory increased rapidly after planting (while dominance decreased), remained stable in the intermediate age range, and reached a maximum in plantations more than 25 years of age. Management practices resulted in decreased understory diversity and species richness, as well as greater dominance. This was more pronounced in younger than in older stands. Moderate management, however, favored a greater diversity of the understory in deciduous forests. The species composition of the plantations and deciduous forests were different, the latter having a wider range of characteristic species. Knowledge of how forestry practices influence biodiversity (in terms of diversity, richness, dominance, and species composition) may allow predictions to be made about the diversity achievable with different management systems.     

The effect of fire on soil organic matter--a review

The extent of the soil organic carbon pool doubles that present in the atmosphere and is about two to three times greater than that accumulated in living organisms in all Earth's terrestrial ecosystems. In such a scenario, one of the several ecological and environmental impacts of fires is that biomass burning is a significant source of greenhouse gases responsible for global warming. Nevertheless, the oxidation of biomass is usually incomplete and a range of pyrolysis compounds and particulate organic matter (OM) in aerosols are produced simultaneously to the thermal modification of pre-existing C forms in soil. These changes lead to the evolution of the OM to "pyromorphic humus", composed by rearranged macromolecular substances of weak colloidal properties and an enhanced resistance against chemical and biological degradation. Hence the occurrence of fires in both undisturbed and agricultural ecosystems may produce long-lasting effects on soils' OM composition and dynamics. Due to the large extent of the C pool in soils, small deviations in the different C forms may also have a significant effect in the global C balance and consequently on climate change. This paper reviews the effect of forest fires on the quantity and quality of soils' OM. It is focused mainly on the most stable pool of soil C; i.e., that having a large residence time, composed of free lipids, colloidal fractions, including humic acids (HA) and fulvic acids (FA), and other resilient forms. The main transformations exerted by fire on soil humus include the accumulation of new particulate C forms highly resistant to oxidation and biological degradation including the so-called "black carbon" (BC). Controversial environmental implications of such processes, specifically in the stabilisation of C in soil and their bearing on the global C cycle are discussed.     

Oviposition site selection and oviposition stimulation by conspecifics in the golden egg bug (<Emphasis Type="Italic">Phyllomorpha laciniata</Emphasis>): implications for female fitness

Phyllomorpha laciniata Vill. (Heteroptera, Coreidae) females lay eggs on the host plant and on the backs of conspecifics. Since egg survival is greater when eggs develop on the backs of conspecifics than when laid on plants, we predict that females should prefer to lay eggs on conspecifics. In addition, because conspecifics are a high-quality site that represents a limiting resource, females should experience oviposition stimulation upon an encounter with a conspecific. Our results reveal that, when both the host plant and conspecifics are available simultaneously, females lay eggs preferentially on conspecifics. The results also support the second prediction, since females housed with conspecifics lay more than twice the number of eggs than isolated females. Isolated females do not seem to retain eggs, suggesting that oviposition stimulation is the result of an acceleration of egg-maturation rates. Other studies have found oviposition stimulation by mating and have suggested that it is the result of male strategies to increase short-term male reproductive success at some cost to females. The evolutionary scenario of our model organism seems to be quite different since females benefit greatly from increasing egg laying when there are conspecifics, because the advantages in terms of offspring survival are likely to translate into substantial increases in female reproductive success.     

Genetic structure and different color morphotypes suggest the occurrence and bathymetric segregation of two incipient species of Sebastes off Argentina

Rockfishes of the genus Sebastes are extensively distributed in the Pacific and Atlantic oceans. Although the occurrence of two morphologically similar species in the Southern Hemisphere, Sebastes oculatus and Sebastes capensis, is now clearly established, the taxonomic status and phylogeographic patterns for the genus in the region have not yet been completely resolved. In this study, we provide new insights into the taxonomy and evolutionary relationships of rockfishes inhabiting the Southwestern Atlantic Ocean, off the coast of mainland Argentina, by combining mitochondrial DNA (mtDNA) control region sequences, microsatellite data, and color pattern analyses. Differences in coloration (“dark” and “light” fish) together with bathymetric segregation between color morphotypes were evident from fish collection and literature review. In addition, the mtDNA phylogenetic analysis and Bayesian clustering analysis using microsatellite data separated the fish into two distinct groups (F _ST?=?0.041), most likely representing incipient species. Our results suggest that speciation-by-depth in the absence of physical barriers could be a widespread mechanism of speciation in Sebastes from both the Northern and Southern Hemispheres. Nevertheless, the degree of genetic differentiation found, added to the large number of individuals displaying high levels of admixture, points to the occurrence of incomplete reproductive barriers between color morphotypes. Beyond the taxonomic and phylogeographic implications of our findings, the occurrence of distinct groups of Sebastes off the coast of Argentina being targeted by different fisheries (angling and trawling) has consequences for the design and implementation of appropriate fishery regulations to avoid overharvest of either group.     

Determining indoor air quality and identifying the origin of odour episodes in indoor environments

A methodology for identifying volatile organic compounds (VOC) and determining air quality of indoor air has been developed. The air samples are collected using pump samplers by the inhabitants when they perceive odorous and/or discomfort episodes. Glass multi-sorbent tubes are connected to the pump samplers for the retention of VOC. The analysis is performed by automatic thermal desorption (ATD) coupled with gas chromatography-mass spectrometry (GC/MS). This methodology can be applied in cases of sick building syndrome (SBS) evaluation, in which building occupants experience a series of varied symptoms that appear to be linked to time spent in the building. Chemical pollutants concentrations (e.g., VOC) have been described to contribute to SBS. To exemplify the methodology, a qualitative determination and an evaluation of VOC present were performed in a dwelling where the occupants experienced the SBS symptoms. Higher total VOC (TVOC) value was detected in episodes in indoor air (1.33 ( 1.53 mg/m3) compared to outdoor air (0.71 ( 0.46 mg/m3). The concentrations of individual VOCs, such as ethanol, acetone, isopropanol, 1-butanol, acetic acid, acetonitrile and 1-metoxy-2-propanol, were also higher than the expected for a standard dwelling. The external source of VOC was found to be a not declared activity of storage and manipulation of solvents located at the bottom of a contiguous building.     

Hepatitis A Virus: State of the Art

Hepatitis A is the most common among all hepatitis worldwide in spite of an efficient vaccine and improved hygiene. Shellfish-borne outbreaks are still of major concern causing hundreds of cases and huge economical losses in the present context of global food trade. Hepatitis A virus (HAV) is a unique picornavirus with many differences in its molecular biology including both its incapacity to induce the inhibition of the cellular protein synthesis and a highly biased and deoptimized codon usage with respect the cell. The final goal of this intriguing strategy seems to be the need for a fine-tuning control of the translation kinetics, particularly at the capsid coding region, and the underlying mechanism is the use of a right combination of common and rare codons to allow a regulated ribosome traffic rate thus ensuring the proper protein folding. Capsid folding is critical to warrant a high environmental stability for a virus transmitted through the fecal–oral route with long extracorporeal periods.     

大型水母爆发对东海生态系统中上层能量平衡的影响

通过建立东海生态系统ECOPATH模型,并将大型水母作为一个独立的功能组,从能量平衡的角度探讨近年来东海大型水母爆发对生态系统的影响,并在此基础上提出抑制大型水母爆发加剧的控制机制的假说。模型分析结果表明:大型水母对中上层生物资源普遍具有显著不利影响;在大型水母、浮游动物和鲳鱼等小型中上层鱼类之间可能存在一个由大型水母爆发引发的生态系统中上层能量反馈循环;大型水母爆发初期将破坏生态系统中上层能量平衡;浮游动物生物量的波动可能是抑制大型水母爆发加剧的自然控制机制之一。     

Carotenoid-based bill and eye ring coloration as honest signals of condition: an experimental test in the red-legged partridge (<Emphasis Type="Italic">Alectoris rufa</Emphasis>)

Carotenoid pigments cannot be synthesized by vertebrates but must be ingested through the diet. As they seem to be a limited resource, carotenoid-based ornaments are particularly interesting as possible honest signals of individual quality, in particular of foraging efficiency and nutritional status. Some studies have demonstrated the condition dependence of carotenoid-based plumage in birds. However, many other carotenoid-pigmented bare parts (i.e. skin, caruncles, bills, cere, and tarsi) are present in birds but, in comparison with plumage, little is known about these traits as indicators of individual quality. Here, we show that the eye ring pigmentation and bill redness of the red-legged partridge (Alectoris rufa) are positively associated to body condition and recent changes in body mass. Also, we found a negative relationship between these two traits and heterophil-to-lymphocyte ratio, an indicator of physiological stress (the relationship with bill redness being significant only for males). In an experiment, we found that after a period of reduction in food intake (with the consequent loss of body mass), food-restricted birds showed lower eye ring pigmentation than ad-libitum-fed birds. Therefore, different ornaments seem to reflect changes in body condition but at different speeds or intensities (eye ring, a fleshy ornament, appears to respond more rapidly to changes in the nutritional status than a keratinized structure as the bill). These results indicate that carotenoid-based ornaments are condition-dependent traits in the red-legged partridge, being therefore susceptible to be employed as honest signals of quality in sexual selection.     

Reverse positional orientation in a neotropical orb-web spider, <Emphasis Type="Italic">Verrucosa arenata</Emphasis>

Most orb-web spiders face downwards in the web. A downward orientation has been proposed to be the optimal strategy because spiders run faster downwards and thus can catch prey quicker. Consequently, orb-web spiders also extend their web in the lower part, leading to top-down web asymmetry. Since the majority of orb-web spiders face downwards, it has been difficult to test the effect of orientation on prey capture and web asymmetry. In this study, we explored the influence of reverse orientation on foraging efficiency and web asymmetry in Verrucosa arenata, a neotropical orb-web spider that faces upwards in the web. We show that reverse orientation does not imply reverse web asymmetry in this species. V. arenata spiders captured more prey in the lower part of the web but more prey per area on the upper part. The average running speeds of spiders did not differ between upward and downward running, but heavier spiders took longer to capture prey while running upwards. We discuss these findings in the context of foraging efficiency and web asymmetry.