Evaluating day–night changes in shallow Mediterranean rocky reef fish assemblages by visual census

Ecological information on coastal fish distribution patterns and habitat use can be greatly improved by nocturnal samplings and observations. To this purpose, the structure of a Mediterranean fish assemblage inhabiting the shallow rocky littoral of Linosa Island (Sicily Strait, Italy) was examined by using visual census to detect possible diel variations in species composition and abundance. Day–night fish distribution patterns were investigated by multivariate and univariate analyses. Overall, 42 fish taxa belonging to 19 families were recorded: 35 during the day and 24 during the night. Seventeen species were common to both diurnal and nocturnal assemblages. Within the diurnal assemblage, Chromis chromis was the most represented species (37.2%), followed by Thalassoma pavo (23.2%) and Sparisoma cretense (10.8%). Within the nocturnal assemblage, the most abundant taxon was Atherina spp. (33.9%), followed by Apogon imberbis (26.4%) and Boops boops (11.5%). Our results indicated wide variation in the abundance and species composition during the day and during the night. Multi Dimensional Scaling plot showed a clear-cut separation between the two assemblages and analysis of similarities found significant differences as well. SIMPER analysis revealed that ten species individually contributed by more than 2.5% to the dissimilarity between diurnal and nocturnal assemblages, T. pavo, C. chromis and S. cretense being the first three species in order of decreasing percentage. ANOVA performed on species richness and fish abundance detected significant differences between diurnal and nocturnal assemblages, the latter showing far lower average values for both variables.     

Sardine (Sardina pilchardus) spawning seasonality in European waters of the northeast Atlantic

Egg data from ichthyoplankton monitoring sites in the western English Channel (1988–2003) and northern Spain (1990–2000) and macroscopic maturity data from biological samples of purse seine landings in western and southern Iberia (1980–2004) are used to describe the spawning seasonality of sardine (Sardina pilchardus) in European waters of the northeast Atlantic using generalised additive models. The fitted models reveal a double peak in spawning activity during early summer and autumn in the western Channel, a wider spring peak off northern Spain and a broad winter season in the western and southern Iberian Peninsula. At all sites, a high probability of spawning activity was observed over at least 3 months of the year, with the duration of the season increasing with both decreasing latitude and increasing fish size. Off western and southern Iberia there are indications that the spawning season has been of longer duration in recent years for all size classes (reaching in some cases 8 months of the year for large fish). These patterns are in general agreement with existing literature and theoretical expectations of sardine spawning being driven locally by the seasonal cycle of water temperature, assuming preferences for spawning at 14 –15°C and avoidance for temperatures below 12°C and above 16°C. Regional quotient plots indicated that spawning tolerance to higher temperatures increases progressively with decreasing latitude. Despite the weak evidence for geographical differences in temperature tolerance that may have some genetic origin, the degree of spatio-temporal overlap in sardine-spawning activity within Atlantic European waters is unlikely to promote any reproductive isolation in that area.     

Effects of two paralytic shellfish toxin producing dinoflagellates on the pelagic harpacticoid copepod Euterpina acutifrons

The effects of two paralytic shellfish toxin (PST) producing dinoflagellates, Alexandrium minutum Halim (high and low toxin strains) and Gymnodinium catenatum Graham, on the pelagic harpacticoid copepod Euterpina acutifrons Dana were tested in a series of experiments run from October 1994 to May 1995. In small volumes (350 ml), both strains of A. minutum (300 to 350 cells ml^-1), and G. catenatum (175 cells ml^-1), strongly reduced naupliar activity (about 30 and 17% were inactive after 24 h, respectively). Activity is here defined as movement. In medium volumes (6 litre), 40% of nauplii incubated with the high toxin strain of A. minutum (1000 cells ml^-1) and 8% of nauplii incubated with cell-free filtrate of the same culture were inactive after 24 h; these values increased to 50 and 30% respectively after 3 d. In large volumes (20 litre), adult copepods incubated with A. minutum (1000 and 10000 cells ml^-1) for 5 d revealed only trace levels of PSP-toxins (paralytic shellfish poisoning) in the extracts analysed by HPLC. With both strains of A. minutum (1000 and 10000 cells ml^-1), 10 to 15% of the copepods were inactive after 1 to 2 d. It is suggested that E. acutifrons avoids feeding on the dinoflagellates after tasting a few cells, but that the dinoflagellates may exude toxins or other substances that affect the copepods. The inactivating effect of the toxic dinoflagellates on the nauplii was more rapid and stronger than on adult copepods, although strong inactivation and death were also observed in adults with time (up to 80% were inactive after 5 d of incubation with A. minutum). Still, in our experiments a considerable proportion of adult females incubated with the toxic dinoflagellates remained active and were able to produce viable eggs for several days.     

Fungi and wind strongly influence the temporal availability of logs in an old-growth spruce forest.

Coarse woody debris (CWD) is a key habitat for many species in forest ecosystems. To ensure the long-term survival of such species, forest management regimes must include measures that promote dead wood dynamics similar to those of natural forests. Thus, information on CWD dynamics under natural conditions is required, including data pertaining to the underlying agents of disturbance. This study examines modes of mortality, decay rates, and temporal patterns in the availability of Picea abies logs in a Swedish old-growth forest affected by internal, small-scale disturbance. All 684 logs in a 6.6-ha plot were mapped and classified into one of six decay classes. Logs in the early stages of decay were examined for the presence of heart-rot fungi. Six years later all logs were re-inventoried, including newly formed logs. Matrix models based on the transition rates between decay classes showed that it took about 60 years for 90% of the logs to decay beyond class 6 (a deformed trunk with soft wood). Large logs (> 26 cm) decayed 40% more slowly than small logs (< 25 cm). The initial volume of logs was 37.6 m3/ha but increased to 44.8 m3/ha after six years. In addition, there was a large shift in the decay-class distribution. The volume of logs in early and late decay classes increased by 71% and 45%, respectively, while the volume of logs in the intermediate decay classes decreased by 32%. The fluctuations appear to result from pulses in mortality, driven by a combination of strong winds and the heart-rot fungus, Phellinus chrysoloma, which was present in more than 30% of all logs at an early stage of decay. These results show that large temporal fluctuations in dead wood also occur in the absence of large-scale disturbance, and that heart-rot fungi are important factors driving the overall dynamics of dead wood. Since many wood-inhabiting species are naturally rare and have very specific substrate demands, such temporal variability in dead wood availability may have effects on biodiversity and should be taken into account when designing small, protected forest areas.     

Studying crop sequences with CarrotAge,a HMM-based data mining software

We have developed a knowledge discovery system based on high-order hidden Markov models for analyzing spatio-temporal data bases. This system, named CarrotAge , takes as input an array of discrete data – the rows represent the spatial sites and the columns the time slots – and builds a partition together with its a posteriori probability. CarrotAge has been developed for studying the cropping patterns of a territory. It uses therefore an agricultural drench database, named Ter-Uti , which records every year the land-use category of a set of sites regularly spaced. The results of CarrotAge are interpreted by agronomists and used in research works linking agricultural land use and water management. Moreover, CarrotAge can be used to find out and study crop sequences in large territories, that is a main question for agricultural and environmental research, as discussed in this paper.     

One-year study of the elemental composition and source apportionment of PM10 aerosols in Florence, Italy

An extensive investigation was carried out for the characterisation of the air particulate composition in Florence. The aim was to determine the aerosol elemental concentrations, as well as to identify pollution sources. For our investigation, the external Particle-Induced X-Ray Emission-Particle-Induced gamma-Ray Emission beam facility of the Istituto Nazionale di Fisica Nucleare, Van de Graaff accelerator at the Physics Department of the Florence University was used. We report the results of the analysis of a long temporal series (approximately 1 yr) of PM10 particulate samples, collected on Millipore filters on a daily basis in three different sites (characterised by different urban settings). Daily concentrations of more than 20 elements were detected. The long sampling period (approximately 1 yr) allowed a comparison with the air quality recommended values and the identification of seasonal variations. Four main sources (traffic, oil-combustion, soil-dust, and wind transported sea-salt) were extracted with the help of Principal Component Analysis (PCA). An absolute PCA showed traffic to be the major source both in the high traffic site and in the urban background site.     

Living within fallen palm leaves: the discovery of an unknown Blommersia (Mantellidae: Anura) reveals a new reproductive strategy in the amphibians of Madagascar

We describe a new mantelline frog of the genus Blommersia found in rainforest in North East Madagascar, from the protected areas of Ambatovaky, Betampona, Masoala, and Zahamena. Blommersia angolafa n.sp. is a small frog, with a body size of 17–21 mm, expanded finger and toe tips, and colouration ranging from yellow to dark brown, with pale-bluish spots on the flanks and light tips of fingers and toes. A peculiar aspect characterising this new species is its novel life history and reproductive mode. Both sexes live and breed in a phytotelmic habitat of water accumulated within fallen prophylls and fallen leaf sheaths of at least three species of Dypsis palms. Within these phytotelmata, egg laying and complete larval development occur. Thus, B. angolafa n.sp. represents a new evolutionary lineage of Malagasy frogs in which phytotelmy is known. Up to now, reproduction in phytotelmata in Malagasy frogs has been reported for many cophyline microhylids, most species of Guibemantis, Mantella laevigata, and possibly in a still-undescribed species belonging to the genus Spinomantis. We consider the reproductive mode of B. angolafa as a derived character, having evolved from the more typical reproduction in lentic water bodies. The general scarcity of lentic habitats in Malagasy rainforests may have provided the conditions that favoured the evolution of this phytotelmic breeding strategy. The new species, being specialised to a habitat represented by a few selected Dypsis species, potentially suffers the selective exploitation of these palms.     

Litter decomposition and nitrogen release in a sloping Mediterranean subtropical agroecosystem on the coast of Granada (SE, Spain): Effects of floristic and topographic alteration on the slope

On the coast of Granada (SE, Spain), an economically important area for subtropical fruit cultivation, the crops are grown on orchard terraces. Also, high amounts of fertilizers, often excessive, are used in this type of intensive agriculture. However, each year significant fractions of nutrients taken up by the trees return to the soil by fallen leaves. Using a litter-bag technique, we assessed the decomposition rates and N-release in various types of litter. Our main purpose was to compare two different agroecosystem scenarios: (1) an unaltered slope consisting mainly of a mixture of herbaceous plants (Papaver rhoeas, Convolvulus sp., Malva sylvestris, Reseda phyteuma, Anacyclus sp., Sinapis arvensis, Medicago sp.) among spontaneous perennial woody shrubs (Genista umbellata, Olea europaea, Lavandula officinalis, Phlomis purpurea, Retama sphaerocarpa), and (2) an altered slope cultivated with subtropical trees on terraces: loquat (Eriobotrya japonica), mango (Mangifera indica), avocado (Persea americana), and cherimoya (Annona cherimola), with groundcover plantings of aromatic, medicinal, and melliferous plants (AMMPs) on the taluses of the terraces, which are usually used for erosion control: Lavandula dentata, Thymus mastichina, Satureja obovata, Rosmarinus officinalis, Anthyllis cytisoides. In the leaves from the subtropical crops, we found the highest decomposition rates in cherimoya and the lowest in mango (1.30 and 0.64 years⁻¹, respectively). Leaves from mango and loquat registered initial peaks of N immobilization and later N-release, which was highest in cherimoya and avocado leaves (71.2 and 56.8% of the initial remaining N). In the spontaneous woody shrubs, O. europaea and G. umbellata were the slowest in decomposing (1.18 and 1.01 years⁻¹, respectively) contrary to L. officinalis, which decomposed fastest (2.22 years⁻¹). Only L. officinalis and P. purpurea registered a net N-release at the end of the study. The AMMPs showed different decomposition patterns: L. dentata registered the highest decomposition rates and Rosmarinus the lowest (1.9 and 1.1 years⁻¹, respectively). T. mastichina, L. dentata, and S. obovata had the highest N-release, whereas R. officinalis and A. cytisoides showed N immobilization (183 and 122% of the initial N). Knowledge of the dynamics of nutrient release and litter decomposition will be useful for predicting nutrient availability and nutrient cycles in these types of agroecosystems where subtropical orchards are grown on terraces.     

Determination of polychlorinated biphenyl and polycyclic aromatic hydrocarbon marine regional Sediment Quality Guidelines within the European Water Framework Directive

Marine regional Sediment Quality Guidelines (SQG) for polychlorinated biphenyls (PCB) and polycyclic aromatic hydrocarbons (PAH) from the Basque coast (SE Bay of Biscay) were determined, on the basis of sediment chemistry, toxicity and benthic community disturbance from analysis of 756 estuarine and coastal samples. The SQG were calculated using a percentile approach (based upon effect and non-effect data), using non-normalised and normalised concentration, by total organic carbon. However, normalisation by total organic carbon did not result in any improvement in accuracy compared with non-normalised values. Hence, this study proposes non-normalised SQG values for assessment of the chemical and physicochemical status in marine waters in the Basque Country, within the Water Framework Directive: 24.6–29 μg kg^?1 for total PCBs; 164–285 μg kg^?1 for low molecular weight PAH; 922–1537 μg kg^?1 for high molecular weight PAH; and 1607–2617 μg kg^?1 for total PAH.