Are the TTAGG and TTAGGG telomeric repeats phylogenetically conserved in aculeate Hymenoptera?

Despite the (TTAGG)_n telomeric repeat supposed being the ancestral DNA motif of telomeres in insects, it was repeatedly lost within some insect orders. Notably, parasitoid hymenopterans and the social wasp Metapolybia decorata (Gribodo) lack the (TTAGG)_n sequence, but in other representatives of Hymenoptera, this motif was noticed, such as different ant species and the honeybee. These findings raise the question of whether the insect telomeric repeat is or not phylogenetically predominant in Hymenoptera. Thus, we evaluated the occurrence of both the (TTAGG)_n sequence and the vertebrate telomere sequence (TTAGGG)_n using dot-blotting hybridization in 25 aculeate species of Hymenoptera. Our results revealed the absence of (TTAGG)_n sequence in all tested species, elevating the number of hymenopteran families lacking this telomeric sequence to 13 out of the 15 tested families so far. The (TTAGGG)_n was not observed in any tested species. Based on our data and compiled information, we suggest that the (TTAGG)_n sequence was putatively lost in the ancestor of Apocrita with at least two subsequent independent regains (in Formicidae and Apidae).     

导致上西里西亚工业区儿童血铅水平升高环境和社会经济因素研究

本文集中在横向分析近期波兰儿童铅暴露和铅暴露增加背后的社会经济因素。在上西里西亚工业区,铅是分布最广泛的有毒重金属之一。儿童血铅水平升高关系儿童幸福,不断引起严重关切。本研究涉及在1999 - 2013年间,上西里西亚地区3岁到18岁的4 882名儿童。记录了每一个孩子血液中铅的浓度。孩子的父母被要求回答关于儿童接触铅的环境和家庭社会经济条件的问卷调查。铅暴露增加的因素包括：父母受教育程度较低,父母失业、父母的职业铅暴,家庭的贫穷社会经济地位,在家吸烟,生活在建筑物底层,食用本地种植的蔬菜和水果,在污染环境中长期进行户外活动和男性性别。铅的环境暴露仍然是导致上西里西亚地区儿童慢性铅中毒的主要因素。与儿童血铅浓度关系最大的社会经济因素是儿童父母的低教育水平。
精选自Wojciech Pelc, Natalia Pawlas, Micha? Dobrakowski, S?awomir Kasperczyk. Environmental and socioeconomic factors contributing to elevated blood lead levels in children from industrial area of Upper Silesia. Environmental Toxicology and Chemistry: Volume 35, Issue 10, pages 2597–2603, October 2016. DOI: 10.1002/etc.3429
详情请见http://onlinelibrary.wiley.com/doi/10.1002/etc.3429/full
     

Products of biotransformation of polycyclic aromatic hydrocarbons in fishes of the Athabasca/Slave river system,Canada

Concentrations of products of biotransformation of polycyclic aromatic hydrocarbons (PBPAH) were measured in bile of five fishes of nutritional, cultural and ecological relevance from the Athabasca/Slave river system. Samples were collected in Alberta and the Northwest Territories, Canada, during three seasons. As a measure of concentrations of PBPAHs to which fishes are exposed and to gain information on the nature and extent of potential exposures of people or piscivorous wildlife, concentrations of biotransformation products of two- and three-ringed, four-ringed and five-ringed PAHs were measured using synchronous fluorescence spectroscopy. Spatial and seasonal differences were observed with greater concentrations of PBPAHs in samples of bile of fish collected from Fort McKay as well as greater concentrations of PBPAHs in bile of fish collected during summer compared to those collected in other seasons. Overall, PBPAHs were greater in fishes of lower trophic levels and fishes more closely associated with sediments. In particular, goldeye (Hiodon alosoides), consistently contained greater concentrations of all the PBPAHs studied.     

Development and testing of a micro wind tunnel for on-site wind erosion simulations

Wind erosion processes affect soil surfaces across all land uses worldwide. Understanding the spatial and temporal scales of wind erosion is a challenging undertaking because these processes are diverse and highly variable. Wind tunnels provide a useful tool as they can be used to simulate erosion at small spatial scales. Portable wind tunnels are particularly valued because erosion can be simulated on undisturbed soil surfaces in the field. There has been a long history of use of large portable wind tunnels, with consensus that these wind erosion simulation tools can meet real world aerodynamic criteria. However, one consequence of striving to meet aerodynamic reality is that the size of the tunnels has increased, making them logistically difficult to work with in the field and resulting in a tendency to homogenise naturally complex soil surfaces. This homogenisation is at odds with an increasing awareness of the importance that small scale processes have in wind erosion. To address these logistical and surface homogenisation issues we present here the development and testing of a micro wind tunnel (MWT) designed to simulate wind erosion processes at high spatial resolution. The MWT is a duct-type design—0.05 m tall 0.1 m wide and with a 1.0 m working section. The tunnel uses a centrifugal motor to suck air through a flow‐conditioning section, over the working section and then through a sediment collection trap. Simulated wind velocities range from 5 to 18 m s^?1, with high reproducibility. Wind speeds are laterally uniform and values of u _* at the tunnel bed (calculated by measuring the pressure gradients within the MWT) are comparable with those of larger tunnels in which logarithmic profiles can be developed. Saltation sediment can be added. The tunnel can be deployed by a single person and operated on slopes ranging from 0 to 10°. Evidence is presented here that the MWT provides new and useful understanding of the erodibility of rangelands, claypans and ore stockpiles.     

Modeling the interaction between tides and storm surges for the Taiwan coast

An unstructured grid, two-dimensional hydrodynamic model was established and applied to the coast of Taiwan to investigate the tide-surge interaction. Tidal elevations at the open boundaries coupled with a global ocean tidal model and the meteorological conditions using a cyclone model are used to drive the model. The model was calibrated and verified with the observed tidal levels at six tidal stations for seven typhoon events to ascertain the capability and feasibility of the model. The results show reasonable agreement between the simulated and observed tidal levels. The validated model was then applied to probe the influence of tide-surge interaction on phase, water levels, and storm surge height. We found that the tide-surge interaction influenced both the magnitude and timing of the surge, which depended on the typhoon path. The storm surge heights at different tidal stations were significantly influenced by wind stresses and directions. The water level rise due to the storm surge during high tide was greater at neap tide than at spring tide. Changing tidal ranges altered the prediction of the surge enough to induce the changes in peak water levels.     

Diffusional mass transfer coefficient at the water–sediment interface for wind-induced flow in very shallow lagoons

Very shallow lagoons that are a few centimeters deep are common in the arid Andes of Northern Chile, Argentina, Bolivia and Perú. The dynamics of these lagoons are dominated by the water–sediment interface (WSI) and strong afternoon winds. Although many studies have examined the diffusional mass transfer coefficients (k _t ) of open channel flows, estimates for wind-induced flows are still unknown. The aim of this article is to propose and validate an analytical expression for computing k _t at the WSI for wind-induced flow. The laboratory measurements were conducted in a wind tunnel with a water tank of variable depth located at its downwind end. Natural muddy sediments were placed in the middle of the tank so that the dissolved oxygen (DO) was consumed in the sediments. The diffusional mass transfer coefficient that characterizes the DO uptake in the sediment was obtained from DO micro-profiles measured with an OX-25 Unisense microelectrode. Water velocity profiles were measured with a 2D side-view Sontek acoustic doppler velocimetry (ADV), and the wind shear velocity was computed based on wind velocity profiles that were measured with an Extech hot-wire anemometer. A total of 16 experiments were conducted with different water depths and wind shear stresses. The constants required by the model were determined from these experiments, and the analytical expression was successfully validated by the laboratory observations. The analytical expression obtained for computing k _t was also validated with field observations that were conducted in October, 2012, in Salar del Huasco, Northern Chile (20.274° S, 68.883° W, 3800 m above sea level). The comparison between the observed and predicted values of k _t provides a determination coefficient of r ² = 0.48 and a p value < 0.01. The results show that the value of k _t for wind-induced flow is proportional to the wind shear velocity and the inverse of the Reynolds number of the wind-induced current.     

Efficient Markov chain Monte Carlo sampling for hierarchical hidden Markov models

Traditional Markov chain Monte Carlo (MCMC) sampling of hidden Markov models (HMMs) involves latent states underlying an imperfect observation process, and generates posterior samples for top-level parameters concurrently with nuisance latent variables. When potentially many HMMs are embedded within a hierarchical model, this can result in prohibitively long MCMC runtimes. We study combinations of existing methods, which are shown to vastly improve computational efficiency for these hierarchical models while maintaining the modeling flexibility provided by embedded HMMs. The methods include discrete filtering of the HMM likelihood to remove latent states, reduced data representations, and a novel procedure for dynamic block sampling of posterior dimensions. The first two methods have been used in isolation in existing application-specific software, but are not generally available for incorporation in arbitrary model structures. Using the NIMBLE package for R, we develop and test combined computational approaches using three examples from ecological capture–recapture, although our methods are generally applicable to any embedded discrete HMMs. These combinations provide several orders of magnitude improvement in MCMC sampling efficiency, defined as the rate of generating effectively independent posterior samples. In addition to being computationally significant for this class of hierarchical models, this result underscores the potential for vast improvements to MCMC sampling efficiency which can result from combinations of known algorithms.     

Use of non-homogeneous Poisson process (NHPP) in presence of change-points to analyze drought periods: a case study in Brazil

Rain precipitation in the last years has been very atypical in different regions of the world, possibly, due to climate changes. We analyze Standard Precipitation Index (SPI) measures (1, 3, 6 and 12-month timescales) for a large city in Brazil: Campinas located in the southeast region of Brazil, São Paulo State, ranging from January 01, 1947 to May 01, 2011. A Bayesian analysis of non-homogeneous Poisson processes in presence or not of change-points is developed using Markov Chain Monte Carlo methods in the data analysis. We consider a special class of models: the power law process. We also discuss some discrimination methods for the choice of the better model to be used for the rain precipitation data.     

Mate choice in the brown thornbill (<Emphasis Type="Italic">Acanthiza pusilla</Emphasis>): are settlement decisions,divorce and extrapair mating complementary strategies?

In socially monogamous birds, females may express mate preferences when they first select a breeding partner, through divorce and subsequent breeding dispersal to a new partner and through extrapair mating. We examined settlement patterns, divorce and breeding dispersal in a sedentary Australian passerine, the brown thornbill (Acanthiza pusilla), in relation to two traits known to influence extrapair paternity (male age and male size). Settlement decisions, divorce and territory switching behaviour were all female strategies that reduced their likelihood of breeding with 1-year-old males. Females preferred to settle in territories with 2+ -year-old males, were more likely to divorce 1-year-old males, and only switched territories if they had an opportunity to form a new pair bond with an old male. In contrast, female settlement and divorce decisions were not influenced by male size. Female thornbills obtain a direct benefit from preferring older males as social mates because breeding success improves with male age in brown thornbills. Nevertheless, divorce rates in this species were low (14% of pair bonds were terminated by divorce), and individuals rarely switched territories following the death of a mate. Both of these mating strategies appeared to be primarily constrained by the distance adults moved to initiate a new pair bond (1–2 territories) and by the limited availability of unpaired older males in the immediate neighbourhood.Communicated by M. Webster     

How Kentish plovers,<Emphasis Type="Italic"> Charadrius alexandrinus</Emphasis>, cope with heat stress during incubation

Biparental incubation is frequent among shorebirds and is expected when the survival prospects of offspring increase relative to uniparental incubation. To understand why this occurs, it is important to identify the factors that constrain uniparental incubation. It is assumed that birds choose nesting sites that provide an appropriate microclimate for incubation. Many shorebirds nest in sites with no or little cover, where ambient temperatures at ground level might be >50°C during very hot days. Shorebirds nest in exposed sites because predation risk on incubating adults is higher in covered sites. In hot environments, incubating shorebirds might experience heat stress in exposed sites, and this may compromise nesting success if adults are unable to attend their nests continuously, limiting the possibilities of uniparental incubation and thus the expression of a sexual conflict over incubation. The operative temperatures of Kentish plovers (Charadrius alexandrinus) were recorded in exposed and covered sites, and the thermal behaviour and incubating tactics of pair members were studied in a hot environment. During the hottest part of the day, there was a difference of 10–15°C in the operative temperatures of plovers between covered and exposed sites. Plovers in covered sites did not exhibit any thermoregulatory behaviour indicative of thermal stress, probably because the thermal range encountered by them in such places during most of the daytime was close to the thermo-neutral zone. The frequency with which plovers in exposed sites exhibited thermoregulatory behaviour was related to ambient temperature. Under very hot conditions, incubating birds were probably unable to maintain homeostasis for long periods and pair members resorted to shortening incubation bouts. Female Kentish plovers mainly incubate in the daytime and males during the night. However, the probability of diurnal incubation by males increased with ambient temperature in exposed nests, but not in covered ones. In fact, the frequency of participation in diurnal incubation by males was greater in exposed than in covered sites, suggesting that the participation of males in diurnal incubation may be related to the inability of females to stay at the nest during long periods when the ambient temperature is high. Even after resorting to shortened incubation bouts, the plovers may be unable to attend their nests continuously during heat waves, and the nests may be deserted. The propensity of plovers to desert their nests was affected by proximity to water, with nests located close to water being deserted less frequently. It seems likely that susceptibility to thermal stress changed in relation to proximity to water because in sites close to water it was possible to belly-soak, which would allow a more continuous nest attendance. Therefore, despite the adoption of behavioural solutions to face heavy heat loads, nesting success was vulnerable to these solutions because heat stress during extended periods may constrain parental nest attendance, and this may limit the opportunities for sexual conflicts over incubation.Communicated by J. Graves