Drei neue Nickelenzyme aus anaeroben Bakterien

Until recently nickel was not considered to be an element of biological importance. Nutritional studies have shown, however, that many eucaryotic and procaryotic organisms are dependent on the transition metal for growth. Four enzymes are presently known to contain nickel: urease from plants and from bacteria; methyl CoM reductase from methanogenic bacteria; all “uptake” hydrogenases investigated so far; and carbon monoxide dehydrogenase from anaerobic bacteria. The prosthetic group of the methyl CoM reductase has been identified as a nickel tetrapyrrole, the structure of which has been elucidated.     

Determination of metal and organometal trophic bioaccumulation in the benthic macrofauna of the Adour estuary coastal zone (SW France, Bay of Biscay)

A multidisciplinary approach has been adopted in order to investigate the bioaccumulation of metals and organometals in macrobenthic populations. A complete method coupling a sampling strategy and classification of benthic organisms with a performant analytical procedure for the analysis of both metals and organometals has been developed. A single sample preparation method using a TMAH extraction and species specific isotope dilution makes it possible to analyse metals and organometals in the same extract, which is especially interesting for situations where only a limited amount of sample is available. Low detection limits have been obtained in the range of 12-250 pg g(-1) for mercury and butyltin compounds and 0.4-50 ng g(-1) for metals with good precision (1-10% RSD) even for a very low mass of sample (0.02 g). This method has been applied for monitoring contamination and bioaccumulation of metals and organometals as well as the biodiversity and trophic structure of the macrobenthic population of the Adour Estuary (South-West, France). The benthic macrofauna diversity indicates that inner estuarine stations are moderately polluted whereas outer estuarine stations are less impacted. However, metals concentrations in both sediment and benthic biomass do not change drastically between stations. Moreover, the bioaccumulation has been determined in relation to the feeding guild of benthic organisms. The results demonstrate that higher bioaccumulation is generally observed for deposit feeders directly impacted by sediment contamination compared to suspensive feeders and predators. Biomagnification along the trophic levels was highlighted for MMHg but no significant trend was observed for the other metallic compounds.     

Population growth in snow geese: a modeling approach integrating demographic and survey information

There are few analytic tools available to formally integrate information coming from population surveys and demographic studies. The Kalman filter is a procedure that facilitates such integration. Based on a state-space model, we can obtain a likelihood function for the survey data using a Kalman filter, which we may then combine with a likelihood for the demographic data. In this paper, we used this combined approach to analyze the population dynamics of a hunted species, the Greater Snow Goose (Chen caerulescens atlantica), and to examine the extent to which it can improve previous demographic population models. The state equation of the state-space model was a matrix population model with fecundity and regression parameters relating adult survival and harvest rate estimated in a previous capture-recapture study. The observation equation combined the output from this model with estimates from an annual spring photographic survey of the population. The maximum likelihood estimates of the regression parameters from the combined analysis differed little from the values of the original capture-recapture analysis, though their precision improved. The model output was found to be insensitive to a wide range of coefficient of variation (CV) in fecundity parameters. We found a close match between the surveyed and smoothed population size estimates generated by the Kalman filter over an 18-year period, and the estimated CV of the survey (0.078-0.150) was quite compatible with its assumed value (approximately 0.10). When we used the updated parameter values to predict future population size, the model underestimated the surveyed population size by 18% over a three-year period. However, this could be explained by a concurrent change in the survey method. We conclude that the Kalman filter is a promising approach to forecast population change because it incorporates survey information in a formal way compared with ad hoc approaches that either neglect this information or require some parameter or model tuning.     

Available solar energy for flat-plate solar collectors mounted on a fixed or tracking structure

The solar energy received by a flat plate collector is calculated for various tracking modes: fixed, inclination depending on the season or the month; variable inclination with fixed azimuth, variable azimuth with fixed inclination and double tracking. At first, we take into account only the sun position and then, we use validated radiation models for estimating the ground solar radiation. Using a tracker is questionable particularly if the additional costs are taken into account. A good solution to increase the available solar energy is to change seasonally the inclination, that is, 4 times per year.     

Organochlorine pollution in tropical rivers (Guadeloupe): role of ecological factors in food web bioaccumulation

Concentrations of organochlorine pesticides and stable isotope ratios of nitrogen and carbon were measured in a tropical freshwater ecosystem to evaluate the contamination level of biota and examine the bioaccumulation patterns of pollutants through the food web. Chemical analyses showed a general and heavy contamination of the entire food web. They revealed the strong accumulation of pollutants by juveniles of diadromous fishes and shrimps, as they re-enter the river. The role of ecological factors in the bioaccumulation of pesticides was evaluated. Whereas the most persistent pollutants (chlordecone and monohydro-chlordecone) were related to the organisms diet and habitat, bioaccumulation of β-HCH was only influenced by animal lipid content. The biomagnification potential of chlordecone through the food chain has been demonstrated. It highlighted the importance of trophic transfer in this compound bioaccumulation process. In contrast, bioconcentration by passive diffusion from water seemed to be the main exposure route of biota to β-HCH.     

Monitoring plastic ingestion by the northern fulmar Fulmarus glacialis in the North Sea

The abundance of plastics in stomachs of northern fulmars from the North Sea is used in the OSPAR Ecological Quality Objective (EcoQO) for marine litter. The preliminary EcoQO defines acceptable ecological quality as the situation where no more than 10% of fulmars exceed a critical level of 0.1 g of plastic in the stomach. During 2003-2007, 95% of 1295 fulmars sampled in the North Sea had plastic in the stomach (on average 35 pieces weighing 0.31 g) and the critical level of 0.1 g of plastic was exceeded by 58% of birds, with regional variations ranging from 48 to 78%. Long term data for the Netherlands since the 1980s show a decrease of industrial, but an increase of user plastics, with shipping and fisheries as the main sources. The EcoQO is now also used as an indicator for Good Environmental Status in the European Marine Strategy Framework Directive.     

Alkane biodegradation and dynamics of phylogenetic subgroups of sulfate-reducing bacteria in an anoxic coastal marine sediment artificially contaminated with oil

For 503 days, unoiled control and artificially oiled sediments were incubated in situ at 20m water depth in a Mediterranean coastal area. Degradation of the aliphatic fraction of the oil added was followed by GC-MS. At the same time, terminal restriction fragment length polymorphism (T-RFLP) of 16S rRNA encoding genes was used to detect dynamics in the sulfate-reducing bacteria (SRB) community in response to the oil contamination. Specific polymerase chain reaction (PCR) primer sets for five generic or suprageneric groups of SRB were used for PCR amplification of DNA extracted from sediments. During the experiment, hydrocarbons from C(17) to C(30) were significantly degraded even in strictly anoxic sediment layers. Of the five SRB groups, only two groups were detected in the sediments (control and oiled), namely the Desulfococcus-Desulfonema-Desulfosarcina-like group and the Desulfovibrio-Desulfomicrobium-like group. Statistical analysis of community patterns revealed dynamic changes over time within these two groups following the contamination. Significant differences in community patterns were recorded in artificially oiled compared with control sediments. Cloning and sequencing of 16S rRNA encoding genes performed after 503 days showed that many of the most abundant sequences were closely related to hydrocarbonoclastic SRB which could have played an active role in the observed biodegradation of aliphatic hydrocarbons. Results from the present study provide useful information on the dynamics of dominant SRB in heavily oil-contaminated sediments and their potential for anaerobic biodegradation for the treatment of spilled oil in anoxic marine environments.