A Modeling System to Assess Land Cover Land Use Change Effects on SAV Habitat in the Mobile Bay Estuary

Estuarine ecosystems are largely influenced by watersheds directly connected to them. In the Mobile Bay, Alabama watersheds we examined the effect of land cover and land use (LCLU) changes on discharge rate, water properties, and submerged aquatic vegetation, including freshwater macrophytes and seagrasses, throughout the estuary. LCLU scenarios from 1948, 1992, 2001, and 2030 were used to influence watershed and hydrodynamic models and evaluate the impact of LCLU change on shallow aquatic ecosystems. Overall, our modeling results found that LCLU changes increased freshwater flows into Mobile Bay altering temperature, salinity, and total suspended sediments (TSS). Increased urban land uses coupled with decreased agricultural/pasture lands reduced TSS in the water column. However, increased urbanization or agricultural/pasture land coupled with decreased forest land resulted in higher TSS concentrations. Higher sediment loads were usually strongly correlated with higher TSS levels, except in areas where a large extent of wetlands retained sediment discharged during rainfall events. The modeling results indicated improved water clarity in the shallow aquatic regions of Mississippi Sound and degraded water clarity in the Wolf Bay estuary. This integrated modeling approach will provide new knowledge and tools for coastal resource managers to manage shallow aquatic habitats that provide critical ecosystem services.     

Calibrating a Basin‐Scale Groundwater Model to Remotely Sensed Estimates of Groundwater Evapotranspiration

Remotely sensed vegetation indices correspond to canopy vigor and cover and have been successfully used to estimate groundwater evapotranspiration (ET_g) over large spatial and temporal scales. However, these data do not provide information on depth to groundwater (dtgw) necessary for groundwater models (GWM) to calculate ET_g. An iterative approach is provided that calibrates GWM to ET_g derived from Landsat estimates of the Enhanced Vegetation Index (EVI). The approach is applied to different vegetation groups in Mason Valley, Nevada over an 11‐year time span. An uncertainty analysis is done to estimate the resulting mean and 90% confidence intervals in ET_g to dtgw relationships to quantify errors associated with plant physiologic complexity, species variability, and parameter smoothing to the 100 m GWM‐grid, temporal variability in soil moisture and nonuniqueness in the solution. Additionally, a first‐order second moment analysis shows ET_g to dtgw relationships are almost exclusively sensitive to estimated land surface, or maximum, ET_g despite relatively large uncertainty in extinction depths and hydraulic conductivity. The EVI method of estimating ET_g appears to bias ET_g during years with exceptionally wet spring/summer conditions. Excluding these years improves model performance significantly but highlights the need to develop a methodology that accounts not only on quantity but timing of annual precipitation on phreatophyte greenness.     

Substrate organic matter to improve nitrate removal in surface-flow constructed wetlands

A wetland mesocosm experiment was conducted in eastern North Carolina to determine if organic matter (OM) addition to soils used for in-stream constructed wetlands would increase NO3--N treatment. Not all soils are suitable for wetland substrate, so OM addition can provide a carbon and nutrient source to the wetland early in its development to enhance denitrification and biomass growth. Four batch studies, with initial NO3--N concentrations ranging from 30 to 120 mg L-1, were conducted in 2002 in 21 surface-flow wetland mesocosms. The results indicated that increasing the OM content of a Cape Fear loam soil from 50 g kg-1 (5% dry wt.) to 110 g kg-1 (11% dry wt.) enhanced NO3--N wetland treatment efficiency in spring and summer batch studies, but increases to 160 g kg-1 (16% dry wt.) OM did not. Wetlands constructed with dredged material from the USACE Eagle Island Confined Disposal Facility in Wilmington, NC, with initial OM of 120 g kg-1 (12% dry wt.), showed no improvement in NO3--N treatment efficiency when increased to 180 g kg-1 (18% dry wt.), but did show increased NO3--N treatment efficiency in all batch studies when increased to 220 g kg-1 (22% dry wt.). Increased OM addition and biosolids to the Cape Fear loam and dredged material blends significantly increased biomass growth in the second growing season when compared to no OM addition. Results of this research indicate that increased OM in the substrate will reduce the area required for in-stream constructed wetlands to treat drainage water in humid regions. It also serves as a demonstration of how dredged material can be used successfully in constructed wetlands, as an alternative to costly storage by the USACE.     

Integrating long-term stewardship goals into the remediation process: natural resource damages and the Department of Energy

The United States and other developed countries are faced with restoring and managing degraded ecosystems. Evaluations of the degradation of ecological resources can be used for determining ecological risk, making remediation or restoration decisions, aiding stakeholders with future land use decisions, and assessing natural resource damages. Department of Energy (DOE) lands provide a useful case study for examining degradation of ecological resources in light of past or present land uses and natural resource damage assessment (NRDA). We suggest that past site history should be incorporated into the cleanup and restoration phase to reduce the ultimate NRDA costs, and hasten resource recovery. The lands that DOE purchased over 50 years ago ranged from relatively undisturbed to heavily impacted farmland, and the impact that occurred from DOE occupation varies from regeneration of natural ecosystems (benefits) to increased exposure to several stressors (negative effects). During the time of the DOE releases, other changes occurred on the lands, including recovery from the disturbance effects of farming, grazing, and residential occupation, and the cessation of human disturbance. Thus, the injury to natural resources that occurred as a result of chemical and radiological releases occurred on top of recovery of already degraded systems. Both spatial (size and dispersion of patch types) and temporal (past/present/future land use and ecological condition) components are critical aspects of resource evaluation, restoration, and NRDA. For many DOE sites, integrating natural resource restoration with remediation to reduce or eliminate the need for NRDA could be a win-win situation for both responsible parties and natural resource trustees by eliminating costly NRDAs by both sides, and by restoring natural resources to a level that satisfies the trustees, while being cost-effective for the responsible parties. It requires integration of remediation, restoration, and end-state planning to a greater degree than is currently done at most DOE sites.     

Riverine Threat Indices to Assess Watershed Condition and Identify Primary Management Capacity of Agriculture Natural Resource Management Agencies

Managers can improve conservation of lotic systems over large geographies if they have tools to assess total watershed conditions for individual stream segments and can identify segments where conservation practices are most likely to be successful (i.e., primary management capacity). The goal of this research was to develop a suite of threat indices to help agriculture resource management agencies select and prioritize watersheds across Missouri River basin in which to implement agriculture conservation practices. We quantified watershed percentages or densities of 17 threat metrics that represent major sources of ecological stress to stream communities into five threat indices: agriculture, urban, point-source pollution, infrastructure, and all non-agriculture threats. We identified stream segments where agriculture management agencies had primary management capacity. Agriculture watershed condition differed by ecoregion and considerable local variation was observed among stream segments in ecoregions of high agriculture threats. Stream segments with high non-agriculture threats were most concentrated near urban areas, but showed high local variability. 60 % of stream segments in the basin were classified as under U.S. Department of Agriculture’s Natural Resources Conservation Service (NRCS) primary management capacity and most segments were in regions of high agricultural threats. NRCS primary management capacity was locally variable which highlights the importance of assessing total watershed condition for multiple threats. Our threat indices can be used by agriculture resource management agencies to prioritize conservation actions and investments based on: (a) relative severity of all threats, (b) relative severity of agricultural threats, and (c) and degree of primary management capacity.     

Postemergence Control of Microstegium vimineum on Riparian Restoration Sites with Aquatic‐Use Registered Herbicides

Microstegium vimineum is an invasive grass introduced from Asia that has spread throughout riparian areas of the eastern United States threatening native riparian vegetation. Postemergence (POST) herbicides registered for aquatic use were evaluated for control of M. vimineum on two riparian restoration sites in the Piedmont and Upper Coastal Plain of North Carolina. This study found that standard and lower than standard rates of diquat, fluridone, flumioxazin, glyphosate, imazamox, and imazapyr reduced weed stem density and biomass at 6 and 30 weeks after treatment (WAT). Both rates of bispyribac and penoxsulam provided less control of M. vimineum. Visual ratings showed both rates of diquat, flumioxazin, imazamox, and imazapyr controlled 63‐100% of M. vimineum at 6 WAT and 84‐100% at 30 WAT. Fluridone and glyphosate provided slightly less control. Bispyribac and penoxsulam treatments provided less control at 6 and 30 WAT compared to the other treatments. Plots treated with both rates of diquat, flumioxazin, imazamox, and imazapyr were nearly devoid of all vegetation at 30 WAT. Recommendations include POST application of lower than standard rates of diquat, flumioxazin, fluridone, glyphosate, imazamox, and imazapyr on riparian restoration sites infested with M. vimineum. Immediate vegetation management measures including temporary and permanent plant cover should be employed on treated sites where weeds are completely eradicated to prevent erosion.     

Complex genetic structure of a euryhaline marine fish in temporarily open/closed estuaries from the wider Gulf of Aden

Temporarily open/closed estuaries (TOCEs) are major ecosystems of the Indian Ocean coastal zones. Their functioning is tightly linked to climatic events such as monsoons and storms, and their mouth can close up for prolonged and variable periods of time, thus limiting their connectivity with the marine environment. Two types of genetic markers (i.e., mitochondrial cytochrome c oxidase I (COI) gene and microsatellites) were used to assess the genetic structure of 288 individuals of Terapon jarbua, a widely distributed fish species in the wider Gulf of Aden. Firstly, the hypothesis of panmixia was tested. Then, alternative hypotheses were investigated to explain the population genetic structure of T. jarbua: could it be shaped by (1) regional biogeographic barriers (i.e., Socotra Island vs. mainland Yemen) and/or (2) the particular functioning of TOCEs in relation to the species life cycle and particular physical ocean parameters? On one hand, the polymorphism of the COI inferred (1) a high haplotype diversity and a reduced nucleotide diversity over the whole data set and (2) a “star-like” shape of the haplotype network, thus suggesting a population expansion after local extinctions during the Pleistocene glaciations. On a second hand, the genotyping of eight microsatellites showed a significant genetic differentiation between T. jarbua populations in the wider Gulf of Aden (F _ST = 0.035, p < 0.01), and thus, the panmixia hypothesis was rejected. Analyses of molecular variance results did not show any significant structure between Socotra Island and mainland Yemen and thus did not support the role of biogeographic barriers in structuring T. jarbua populations. Significant multi-locus deficits in heterozygotes at particular locations displaying high levels of F _IS were recorded. It was suggested that a possible Wahlund effect took place in those TOCEs which could gather several cohorts of larvae stemming from different marine subpopulations over the sampled area. The present study emphasized the uniqueness of each TOCE as a potential reservoir of biodiversity and the urgent need for a better conservation program of those estuaries in the region, in order to avoid habitat fragmentation and permanent closure of those nursery areas by human activities.     

Adhesion of Norovirus to Surfaces: Contribution of Thermodynamic and Molecular Properties Using Virus-Like Particles

Food and Environmental Virology - The aim of the study was to assess human norovirus and feline calicivirus (FCV) surface free energy, hydrophobicity, and ability to interact with fresh foods and...