Complete discrepancy between abnormal fetal karyotypes predicted by QF-PCR rapid testing and karyotyped cultured cells in a first-trimester CVS

A chorion villus sample (CVS) biopsied at 11 weeks' gestation for raised nuchal translucency, revealed monosomy X (presumptive 45,X karyotype) by QF-PCR for rapid aneuploidy testing for chromosomes 13, 18, 21, X and Y. Long-term culture gave the karyotype: 47,XY,+ 21[66]/49,XYY,+ 21,+ 21 [22]. This discrepancy prompted redigestion of the combined residual villus fragments from the original QF-PCR assay. The repeat QF-PCR assay identified the presence of trisomy 21 and a Y chromosome consistent with a 47,XY,+ 21 karyotype. A double non-disjunction event early in embryogenesis in a 47,XY,+ 21 conceptus with subsequent cell lineage compartmentalisation of the three observed cell lines (45,X; 47,XY,+ 21 and 49,XYY,+ 21,+ 21) would account for these results. This is the first reported case to describe complete discrepancy at diagnosis between abnormal karyotypes detected by QF-PCR rapid aneuploidy testing and a cultured karyotype in the same CVS. Copyright © 2006 John Wiley & Sons, Ltd.     

Grooves to tubes: evolution of the venom delivery system in a Late Triassic “reptile”

Venom delivery systems occur in a wide range of extant and fossil vertebrates and are primarily based on oral adaptations. Teeth range from unmodified (Komodo dragons) to highly specialized fangs similar to hypodermic needles (protero- and solenoglyphous snakes). Developmental biologists have documented evidence for an infolding pathway of fang evolution, where the groove folds over to create the more derived condition. However, the oldest known members of venomous clades retain the same condition as their extant relatives, resulting in no fossil evidence for the transition. Based on a comparison of previously known specimens with newly discovered teeth from North Carolina, we describe a new species of the Late Triassic archosauriform Uatchitodon and provide detailed analyses that provide evidence for both venom conduction and document a complete structural series from shallow grooves to fully enclosed tubular canals. While known only from teeth, Uatchitodon is highly diagnostic in possessing compound serrations and for having two venom canals on each tooth in the dentition. Further, although not a snake, Uatchitodon sheds light on the evolutionary trajectory of venom delivery systems in amniotes and provide solid evidence for venom conduction in archosaur-line diapsids.     

Estimating carbon supply curves from afforestation of agricultural land in the Northeastern U.S.

The Regional Greenhouse Gas Initiative for the northeastern states of the U.S. allows for terrestrial carbon (C) sequestration offsets generated by afforestation activities only. This paper estimates the maximum potential quantity and associated costs of increasing the storage of carbon by afforestation of existing agricultural land in the 11 states of the Northeast United States. The focus of the work was to describe location, the quantity, and at what cost it would be economically attractive to shift agricultural production to afforestation to increase carbon storage in the region. Widely available data sets were used to (1) identify spatially-explicit areas for lower costs carbon offsets and (2) estimate carbon supply curves related to afforestation of agricultural land over three time periods (10, 20, and 40 years). Carbon accumulation and total carbon offset project costs were estimated at a county scale and combined to identify expected costs per ton of carbon dioxide equivalents (CO₂e). Large variation in estimated costs per ton of CO₂e are driven by varying carbon accumulation potentials and opportunity costs of taking land out of agricultural production, as well as the duration of the project activity. Results show that the lowest cost carbon offset projects will be in certain counties of Maine, Vermont, and New York. Pasture land, with lower opportunity costs, generally presents the opportunity for lower cost carbon offset projects relative to cropland. This analysis estimates that afforestation of pasture land in the northeast will not become economically attractive until the price rises above 10 per metric tonne (MT) CO < sub > 2 < /sub > e and that up to 583 million MT could be economically sequestered if the price were to rise to10 per metric tonne (MT) CO₂e and that up to 583 million MT could be economically sequestered if the price were to rise to 50 per MT CO₂e, based on a 40-year project life. With regard to cropland in the northeast, afforestation does not become economically advantageous for land owners until the price rises above $40 per MT CO₂e. It is estimated that up to 487,000 MT could be sequestered from cropland if the price were to rise to $40 per MT CO₂e. It is estimated that up to 487,000 MT could be sequestered from cropland if the price were to rise to 50 per MT CO₂e, based on a 40-year project life.     

Estimated lead (Pb) exposures for a population of urban community gardeners

Urban community gardens provide affordable, locally grown, healthy foods and many other benefits. However, urban garden soils can contain lead (Pb) that may pose risks to human health. To help evaluate these risks, we measured Pb concentrations in soil, vegetables, and chicken eggs from New York City community gardens, and we asked gardeners about vegetable consumption and time spent in the garden. We then estimated Pb intakes deterministically and probabilistically for adult gardeners, children who spend time in the garden, and adult (non-gardener) household members. Most central tendency Pb intakes were below provisional total tolerable intake (PTTI) levels. High contact intakes generally exceeded PTTIs. Probabilistic estimates showed approximately 40 % of children and 10 % of gardeners exceeding PTTIs. Children’s exposure came primarily from dust ingestion and exposure to higher Pb soil between beds. Gardeners’ Pb intakes were comparable to children’s (in µg/day) but were dominated by vegetable consumption. Adult household members ate less garden-grown produce than gardeners and had the lowest Pb intakes. Our results suggest that healthy gardening practices to reduce Pb exposure in urban community gardens should focus on encouraging cultivation of lower Pb vegetables (i.e., fruits) for adult gardeners and on covering higher Pb non-bed soils accessible to young children. However, the common practice of replacement of root-zone bed soil with clean soil (e.g., in raised beds) has many benefits and should also continue to be encouraged.     

Incompletely resolved phylogenetic trees inflate estimates of phylogenetic conservatism

The tendency for more closely related species to share similar traits and ecological strategies can be explained by their longer shared evolutionary histories and represents phylogenetic conservatism. How strongly species traits co-vary with phylogeny can significantly impact how we analyze cross-species data and can influence our interpretation of assembly rules in the rapidly expanding field of community phylogenetics. Phylogenetic conservatism is typically quantified by analyzing the distribution of species values on the phylogenetic tree that connects them. Many phylogenetic approaches, however, assume a completely sampled phylogeny: while we have good estimates of deeper phylogenetic relationships for many species-rich groups, such as birds and flowering plants, we often lack information on more recent interspecific relationships (i.e., within a genus). A common solution has been to represent these relationships as polytomies on trees using taxonomy as a guide. Here we show that such trees can dramatically inflate estimates of phylogenetic conservatism quantified using S. P. Blomberg et al.'s K statistic. Using simulations, we show that even randomly generated traits can appear to be phylogenetically conserved on poorly resolved trees. We provide a simple rarefaction-based solution that can reliably retrieve unbiased estimates of K, and we illustrate our method using data on first flowering times from Thoreau's woods (Concord, Massachusetts, USA).     

PAHs in surface sediments from coastal and estuarine areas of the northern Bohai and Yellow Seas, China

Polycyclic aromatic hydrocarbon (PAH) concentrations and their risks in surface sediments (n = 35) collected from coastal and estuarine areas of the northern Bohai and Yellow Seas, China, were investigated in 2008. Total concentrations of PAHs ranged from 52.3 to 1,870.6 ng/g dry weight. The greatest concentrations were observed in the Dou River of Tangshan where waste water from small factories is discharged into the river without treatment. At other locations, municipal sewage was the primary contributor of PAHs. Regional differences in concentrations of PAHs in sediments are related to human activities. Concentrations of PAHs were significantly correlated with concentrations of organic carbon in sediments. The patterns of relative concentrations and types of PAHs observed and knowledge of the potential sources, as well as the results of a principal component analysis, are consistent with the primary sources of PAHs in sediments of the northern Bohai Sea and Yellow Sea, being derived from the high-temperature pyrolytic processes such as combustion of fossil fuel. While concentrations of PAHs at most locations did not exceed the effects range median stated by the numerical effect-based sediment quality guidelines of the United States, concentrations of PAHs at some locations were similar to or greater than the effects range low.     

Spatial scale of similarity as an indicator of metacommunity stability in exploited marine systems

The spatial scale of similarity among fish communities is characteristically large in temperate marine systems: connectivity is enhanced by high rates of dispersal during the larval/juvenile stages and the increased mobility of large-bodied fish. A larger spatial scale of similarity (low beta diversity) is advantageous in heavily exploited systems because locally depleted populations are more likely to be "rescued" by neighboring areas. We explored whether the spatial scale of similarity changed from 1970 to 2006 due to overfishing of dominant, large-bodied groundfish across a 300 000-km2 region of the Northwest Atlantic. Annually, similarities among communities decayed slowly with increasing geographic distance in this open system, but through time the decorrelation distance declined by 33%, concomitant with widespread reductions in biomass, body size, and community evenness. The decline in connectivity stemmed from an erosion of community similarity among local subregions separated by distances as small as 100 km. Larger fish, of the same species, contribute proportionally more viable offspring, so observed body size reductions will have affected maternal output. The cumulative effect of nonlinear maternal influences on egg/larval quality may have compromised the spatial scale of effective larval dispersal, which may account for the delayed recovery of certain member species. Our study adds strong support for using the spatial scale of similarity as an indicator of metacommunity stability both to understand the spatial impacts of exploitation and to refine how spatial structure is used in management plans.     

Older adult falls at a metropolitan airport: 2009-2010

IntroductionWe investigated falls at a metropolitan airport to determine fall incidence, identify potential causes of these falls, and suggest opportunities for mitigation.MethodsWe used deidentified incident reports of all falls requiring EMS response that occurred at the airport during 2009 and 2010.ResultsOn average, one fall occurred every 2.3 days. Ninety-six percent (96%) of falls occurred in terminals. Of all falls, 44% occurred on escalators, making escalators the most common location. Seventy-two percent (72%) of fallers were females; 43% were ≥ 65 years; 92% of all falls resulted in a documented injury; 37% of falls resulted in transport to hospital emergency departments. Escalator fall risks include carrying bags (due to changes in baggage fees), using cells phones, not using handrails, and compromised strength and balance.Conclusions and ImpactDiverting at-risk passengers to elevators could significantly reduce the overall falls. Interventions targeting escalator falls have the greatest promise for reducing falls at this airport.     

利用EQuan~(TM)环境分析系统直接进样技术(20ml)LC-MS/MS分析饮用水样品中飞克级含量除草剂化合物

随着人们对环境中除草剂以及其它化学药物残留的毒性作用关注程度的增加,实现对饮用水以及食物中这些物质的准确检测的需要显得更加迫切.