Modeling microbial-mediated reduction in batch reactors

The governing equations that depict microbially-mediated reduction of heavy metals in the subsurface include a system of coupled nonlinear partial differential equations (PDE's) that describe physical (transport), chemical (sorption), and microbial (reduction/oxidation) processes. The existence of nonlinear reaction terms makes numerical simulations more challenging; however, with the advent of time-splitting solution algorithms, nonlinear reaction terms can be isolated from the convective-dispersive components of the governing transport equations and then solved as a coupled system of nonlinear ordinary differential equations (ODE's). In this paper, four methods are evaluated for solving coupled systems of nonlinear ODE's that describe microbially-mediated reduction/oxidation processes. The evaluation involves a series of comparisons of transient simulations of electron donor oxidation, electron acceptor reduction, and microbial biomass accumulation. The methods evaluation is initiated with a comparison of simulation results obtained with the four methods to those generated with an analytical model. Next, laboratory observations, of nitrite consumption by Nitrobacter winogradski in batch reactors are used in a comparison of batch system simulations generated using each of the four methods and BIOKEMOD (biogeochemical kinetic/equilibrium reaction model). The evaluation finds one of the four methods, the quasi-steady-state approximation (QSSA), to be among the most accurate and easiest to implement. Final validation of the QSSA is performed simulating experimental results of microbially-mediated chromium reductions in batch cultures.     

Coupling air quality and land use modeling within an optimization framework

Land use regulations and air quality standards can be effective tools to control air pollution. Atmospheric transport/chemistry simulation models could be used to develop suitable regulations and standards; however, these models are not as efficient as air quality management models developed from embedding governing equations for atmospheric transport/chemistry into an optimization framework. Formulations of two steady-state air quality management models are presented to facilitate the development or evaluation of land use strategies to protect regional air quality from pollution generated from distributed point or nonpoint sources. Both models are linear programs constructed with equations that describe steady-state atmospheric pollutant fate and transport. The first model determines feasible pollutant loading patterns for multiple land use activities to accommodate the greatest regional population. The second model ascertains patterns of expanded land use which have a minimum impact on air quality. The primary goal of this paper is to explain how air pollution and land use modeling may be coupled to create an effective management tool to aid scientists and engineers with decisions affecting air quality and land use. The secondary goal is to show the types of air quality and regulatory information which could be obtained from these models. This latter goal is attained with general conclusions as consequence of applying ‘duality theory.’     

Natural capital in ecology and economics: an overview

The Brundtland Commission report, Our Common Future, defined sustainable development as development that meets the needs of the present without compromising the ability of futuregenerations to meet their own needs. Although the idea of sustainable development has been widely accepted, it has proveddifficult to identify and implement policies and practices thatpromote sustainable economic growth. Some economists, environmental scientists and policy analysts believe that they can transform the consensus about sustainability into manageablepractices. They propose to accomplish this feat with a set of new ideas about the relationships between the economy and theenvironment offered under the banner of 'natural capital'. An ideal account of natural capital would be one or more standard measures or models that would allow the direct comparison of environmental goods, like forests, fresh water and clean air, with economic goods, like money, capital and productivity. By bringing economic science and environmental science to an objective common ground, a natural capital model has the potentialto provide a concrete means of comparing the economic and ecological costs and benefits of particular policies and programmes. This paper offers a survey and analysis of several new contributions to the formation of the natural capital concept from economists, ecologists, policy analysts, biometricians, foresters and a philosopher. The paper concludes that existingmicroeconomic theory may be 'ungreenable', if it is not reformulated. While macroeconomic approaches to natural capitalhave been more successful, they share the limitation that ecosystems and species are valued solely in monetary terms. These problems are taken to suggest that the development of a successful natural capital model may require economic theory tobe recast to include non-monetary social preferences and values.     

Fine particles and carbon monoxide from wood burning in 17th–19th century Danish kitchens: Measurements at two reconstructed farm houses at the Lejre Historical–Archaeological Experimental Center

Carbon monoxide (CO) and particulate matter (PM_2.5) were measured in two reconstructed Danish farmhouses (17–19th century) during two weeks of summer. During the first week intensive measurements were performed while test cooking fires were burned, during the second week the houses were monitored while occupied by guest families. A masonry hearth was located in the middle of each house for open cooking fires and with heating stoves. One house had a chimney leading to the outside over the hearth; in the other, a brickwork hood led the smoke into an attic and through holes in the roof. During the first week the concentration of PM_2.5 averaged daily between 138 and 1650 μg m^?3 inside the hearths and 21–160 μg m^?3 in adjacent living rooms. CO averaged daily between 0.21 and 1.9 ppm in living areas, and up to 12 ppm in the hearths. Highest concentrations were measured when two fires were lit at the same time, which would cause high personal exposure for someone working in the kitchens. 15 min averages of up to 25 400 μg m^?3 (PM_2.5) and 260 ppm CO were recorded. WHO air quality guidelines were occasionally exceeded for CO and constantly for PM_2.5. However, air exchange and air distribution measurements revealed a large draw in the chimney, which ensured a fast removal of wood smoke from the hearth area. The guest families were in average exposed to no more than 0.21 ppm CO during 48 h. Based on a hypothetical time-activity pattern, however, a woman living in this type of house during the 17–19th century would be exposed to daily averages of 1.1 ppm CO and 196 μg m^?3 PM_2.5, which exceeds WHO guideline for PM_2.5, and is comparable to what is today observed for women in rural areas of developing countries.     

Can microbial mineralization be used to estimate microbial availability of organic contaminants in soil?

The aim of this study was to characterize the behaviour of a PAH-degrading bacterium to determine whether mineralization plateaus as a result of substrate removal, a decrease in microbial activity or nutrient availability in sterile soils over time. To investigate this, the mineralization of 14C-phenanthrene was measured until it plateaued; subsequently, additional 14C-phenanthrene, catabolic inocula or nutrients were introduced and mineralization was measured for a further 10 d. Cell numbers were also measured together with 14C-uptake into microbial biomass. Freshly added 14C-phenanthrene was rapidly metabolised by the microorganisms. Neither the addition of a catabolic inoculum nor nutrients affected the extent of 14C-phenanthrene mineralization. Cell numbers remained constant over time, with only a small amount of the 14C-activity incorporated into the microbial biomass. This study indicated that the termination of mineralization was due to the removal of available phenanthrene and not decreasing cellular activity or cell death. The mineralization values also correlated with 14C-phenanthrene extractability using beta-cyclodextrin.     

Prediction of mono- and polycyclic aromatic hydrocarbon degradation in spiked soils using cyclodextrin extraction

In this study, an aqueous-based hydroxypropyl-beta-cyclodextrin (HPCD) extraction technique was assessed for its capacity to determine the microbially degradable fraction of mono- and polycyclic aromatic hydrocarbons in four dissimilar soils. A linear relationship (slope=0.90; R2=0.89), approaching 1:1 between predicted and observed phenanthrene mineralization, was demonstrated for the cyclodextrin extraction; however, the water only extraction underestimated the microbially available fraction by a factor of three (slope=3.35; R2=0.64). With respect to determining the mineralizable fraction of p-cresol in soils, the cyclodextrin extraction (slope=0.94; R2=0.84) was more appropriate than the water extraction (slope=1.50; R2=0.36). Collectively, these results suggested that the cyclodextrin extraction technique was suitable for the prediction of the mineralizable fraction of representative PAHs and phenols present in dissimilar soils following increasing soil-contaminant contact times. The assessment of the microbial availability of contaminants in soils is important for a more representative evaluation of soil contamination.     

Report: Combustion Byproducts and Their Health Effects: Summary of the 10th International Congress

The 10th International Congress on Combustion Byproducts and their Health Effects was held in Ischia, Italy, from June 17-20, 2007. It is sponsored by the US NIEHS, NSF, Coalition for Responsible Waste Incineration (CRWI), and Electric Power Research Institute (EPRI). The congress focused on: the origin, characterization, and health impacts of combustion-generated fine and ultrafine particles; emissions of mercury and dioxins, and the development/application of novel analytical/diagnostic tools. The consensus of the discussion was that particle-associated organics, metals, and persistent free radicals (PFRs) produced by combustion sources are the likely source of the observed health impacts of airborne PM rather than simple physical irritation of the particles. Ultrafine particle-induced oxidative stress is a likely progenitor of the observed health impacts, but important biological and chemical details and possible catalytic cycles remain unresolved. Other key conclusions were: (1) In urban settings, 70% of airborne fine particles are a result of combustion emissions and 50% are due to primary emissions from combustion sources, (2) In addition to soot, combustion produces one, possibly two, classes of nanoparticles with mean diameters of?~10?nm and?~1?nm. (3) The most common metrics used to describe particle toxicity, viz. surface area, sulfate concentration, total carbon, and organic carbon, cannot fully explain observed health impacts, (4) Metals contained in combustion-generated ultrafine and fine particles mediate formation of toxic air pollutants such as PCDD/F and PFRs. (5) The combination of metal-containing nanoparticles, organic carbon compounds, and PFRs can lead to a cycle generating oxidative stress in exposed organisms.     

Shrub-Steppe Early Succession Following Juniper Cutting and Prescribed Fire

Pinus-Juniperus L. (Piñon-juniper) woodlands of the western United States have expanded in area nearly 10-fold since the late 1800’s. Juniperus occidentalis ssp. occidentalis Hook. (western juniper) dominance in sagebrush steppe has several negative consequences, including reductions in herbaceous production and diversity, decreased wildlife habitat, and higher erosion and runoff potentials. Prescribed fire and mechanical tree removal are the main methods used to control J. occidentalis and restore sagebrush steppe. However, mature woodlands become difficult to prescribe burn because of the lack of understory fuels. We evaluated partial cutting of the woodlands (cutting 25–50% of the trees) to increase surface fuels, followed by prescribed fire treatments in late successional J. occidentalis woodlands of southwest Idaho to assess understory recovery. The study was conducted in two different plant associations and evaluated what percentage of the woodland required preparatory cutting to eliminate remaining J. occidentalis by prescribed fire, determined the impacts of fire to understory species, and examined early post-fire successional dynamics. The study demonstrated that late successional J. occidentalis woodlands can be burned after pre-cutting only a portion of the trees. Early succession in the cut-and-burn treatments were dominated by native annual and perennial forbs, in part due to high mortality of perennial bunchgrasses. By the third year after fire the number of establishing perennial grass seedlings indicated that both associations would achieve full herbaceous recovery. Cutting-prescribed fire combinations are an effective means for controlling encroaching late successional J. occidentalis and restoring herbaceous plant communities. However, land managers should recognize that there are potential problems associated with cutting-prescribed fire applications when invasive weeds are present.     

Are There Benefits to Mowing Wyoming Big Sagebrush Plant Communities? An Evaluation in Southeastern Oregon

Wyoming big sagebrush (Artemisia tridentata ssp. wyomingensis Beetle & Young) communities frequently are mowed in an attempt to increase perennial herbaceous vegetation. However, there is limited information as to whether expected benefits of mowing are realized when applied to Wyoming big sagebrush communities with intact understory vegetation. We compared vegetation and soil nutrient concentrations in mowed and undisturbed reference plots in Wyoming big sagebrush plant communities at eight sites for three years post-treatment. Mowing generally did not increase perennial herbaceous vegetation cover, density, or biomass production (P > 0.05). Annual forbs and exotic annual grasses were generally greater in the mowed compared to the reference treatment (P < 0.05). By the third year post-treatment annual forb and annual grass biomass production was more than nine and sevenfold higher in the mowed than reference treatment, respectively. Our results imply that the application of mowing treatments in Wyoming big sagebrush plant communities does not increase perennial herbaceous vegetation, but may increase the risk that exotic annual grasses will dominate the herbaceous vegetation. We suggest that mowing Wyoming big sagebrush communities with intact understories does not produce the expected benefits. However, the applicability of our results to Wyoming big sagebrush communities with greater sagebrush cover and/or degraded understories needs to be evaluated.     

Hydrogen sulfide, bacteria, and fish: a unique, subterranean food chain

Photoautotrophs are generally considered to be the base of food webs, and habitats that lack light, such as caves, frequently rely on surface-derived carbon. Here we show, based on analysis of gut contents and stable isotope ratios of tissues (13C:12C and 15N:14N), that sulfur-oxidizing bacteria are directly consumed and assimilated by the fish Poecilia mexicana in a sulfide-rich cave stream in Tabasco state, Mexico. Our results provide evidence of a vertebrate deriving most of its organic carbon and nitrogen from in situ chemoautotrophic production, and reveals the importance of alternative energy production sources supporting animals in extreme environments.