Extra-pair paternity in the monogamous Alpine marmot revealed by nuclear DNA microsatellite analysis

The genetic parentage and pedigrees of 35 litters from 12 family groups of monogamous Alpine marmot (Marmota marmota) in the French Alps were analyzed using six hypervariable sequence repeat nuclear loci (microsatellites). All of the members of these family groups were sampled during a 5-year period. Hairs taken directly from animals served as a source of DNA for amplification of the loci. Our results indicate that the genetic mating system of the Alpine marmot is quite different from a strictly monogamous breeding system. Extra-pair paternity occurred in 11 of the 35 litters (31.4%). Of the 134 juveniles typed, 26 (19.4%) could be attributed to extra-pair copulation (EPC). We examine hypotheses which could explain the evolution of EPC and discuss the different patterns of extra-pair mating. Received: 11 July 1997 / Accepted after revision: 23 May 1998     

Phytoplankton carbon dynamics during a winter-spring diatom bloom in an enclosed marine ecosystem: primary production,biomass and loss rates

Phytoplankton production, standing crop, and loss processes (respiration, sedimentation, grazing by zooplankton, and excretion) were measured on a daily basis during the growth, dormancy and decline of a winter-spring diatom bloom in a large-scale (13 m³) marine mesocosm in 1987. Carbonspecific rates of production and biomass change were highly correlated whereas production and loss rates were unrelated over the experimental period when the significant changes in algal biomass characteristic of phytoplankton blooms were occurring. The observed decline in diatom growth rates was caused by nutrient limitation. Daily phytoplankton production rates calculated from the phytoplankton continuity equation were in excellent agreement with rates independently determined using standard ¹⁴C techniques. A carbon budget for the winter bloom indicated that 82.4% of the net daytime primary production was accounted for by measured loss processes, 1.3% was present as standing crop at the end of the experiment, and 16.3% was unexplained. Losses via sedimentation (44.8%) and nighttime phytoplankton respiration (24.1%) predominated, while losses due to zooplankton grazing (10.7%) and nighttime phytoplankton excretion (2.8%) were of lesser importance. A model simulating daily phytoplankton biomass was developed to demonstrate the relative importance of the individual loss processes.     

Phytoplankton production patterns in Massachusetts Bay and the absence of the 1998 winter–spring bloom

The seasonal productivity cycle and factors controlling annual variation in the timing and magnitude of the winter–spring bloom were examined for several locations (range: 42°20.35′–42°26.63′N; 70°44.19′–70°56.52′W) in Boston Harbor and Massachusetts Bay, USA, from 1995 to 1999, and compared with earlier published data (1992–1994). Primary productivity (mg C m⁻² day⁻¹) in Massachusetts Bay from 1995 to 1999 was generally characterized by a well-developed winter–spring bloom of several weeks duration, high but variable production during the summer, and a prominent fall bloom. The bulk of production (mg C m⁻³ day⁻¹) typically occurred in the upper 15 m of the water column. At a nearby Boston Harbor station a gradual pattern of increasing areal production from winter through summer was more typical, with the bulk of production restricted to the upper 5 m. Annual productivity in Massachusetts Bay and Boston Harbor ranged from a low of 160 g C m⁻² year⁻¹ to a high of 787 g C m⁻² year⁻¹ from 1992 to 1999. Mean annual productivity was higher (mean=525 g C m⁻² year⁻¹) and more variable near the harbor entrance than in western Massachusetts Bay. At the harbor station productivity varied more than 3.5-fold (CV=40%) over an 8 year sampling period. Average annual productivity (305–419 g C m⁻² year⁻¹) and variability around the means (CV=25–27%) were lower at both the outer nearfield and central nearfield regions of Massachusetts Bay. Annual productivity in 1998 was unusually low at all three sites (<220 g C m⁻² year⁻¹) due to the absence of a winter–spring phytoplankton bloom. Potential factors influencing the occurrence of a spring bloom were investigated. Incident irradiance during the winter–spring period was not significantly different (P > 0.05) among years (1995–1999). The mean photic depth during the bloom period was significantly deeper (P < 0.05) in 1998, signifying greater light availability with depth. Nutrients were also in abundance during the winter–spring of 1998 with stratified conditions not observed until May. In general, the magnitude of the winter–spring bloom in Massachusetts Bay from 1995 to 1999 was significantly correlated with winter water temperature (r ²=0.78) and zooplankton abundance (r ²=0.74) over the bloom period (typically February–April). The absence of the 1998 bloom was associated with higher than average water temperature and elevated levels of zooplankton abundance just prior to, and during, the peak winter–spring bloom period. Received: 3 July 2000 / Accepted: 6 December 2000     

A Multidisciplinary Study of Spatial and Temporal Scales Containing Information in Turbulent Chemical Plume Tracking

This report describes the results of a multidisciplinary study of turbulent chemical plume tracking of blue crabs and autonomous agents. The study consists of a coordinated investigation of animal behavior, fluid mechanics, strategy simulations, and chemical sensing. The objective is to provide a comprehensive understanding of chemical plume tracking in a single biological system and to prescribe strategies that are effective for autonomous agents. The consensus of the study is that spatial variation in the plume, measured by sampling at multiple locations simultaneously, yields information that is useful for plume tracking. Behavioral investigations reveal that blue crabs demonstrate the ability to detect the chemical plume and use lateral movements to avoid losing contact with the odor. Blue crabs move rapidly towards the source, strongly suggesting that temporal comparisons of odor properties are not employed during navigation. Analysis of the concentration fields reveals that a spatial correlation between spanwise-separated sensors indicates the relative direction of the plume centerline over short time periods provided the sensor spacing is scaled appropriately relative to the plume. Similarly, simulations of tracking strategies reveal an optimal separation for the sensors at a distance roughly equal to the plume width; both smaller and larger sensor spans degrade tracking performance. The simulations further reveal an optimal sensor size above which the fine details of the concentration distribution are obscured and below which there is insufficient contact with the odor to enable effective navigation. Finally, analysis of the chemical signal shows that the frequency dependent correlation function between two (or more) sensors indicates the relative position of the source.     

Institutional controls for future land use at active installation restoration program (IRP) sites

One of the strategies now in vogue in hazardous waste cleanup is basing remedial strategies on future land use. The initial thrust of CERCLA for permanent and complete remedies has given way, pushed by concepts like “brownfields” and base closure and reuse, to strategies often based on “institutional controls” that attempt to stabilize future land uses at a site based on residual risk. The heart of this concept is that instead of removing all wastes from a site, some wastes can safely remain so long as in the future the site is not used in such a way that the residual contamination poses an unacceptable risk to human health and the environment. “Institutional controls” is a term for land use management strategies that do not rely on engineering approaches to reduce risk, but rather seek to ensure that the site is not used in an inappropriate way in the future. This article cautions that such a strategy has inherent residual risks that must be understood by those involved in implementing hazardous waste cleanups and those responsible for future uses of contaminated property. Simply put, institutional controls are only as good as the processes that are in place to ensure they are respected in the future. This presents particular problems for active duty installations because most of the protections commonly available to private sector sites are not useful at active installations. This article discusses an initiative by the Air Combat Command to develop a handbook on instituting and maintaining land restrictions. It will also discuss that effort in light of the April 21 EPA Region IV guidance on assuring Land Use Controls at Federal Facilities. This article is based on a paper and presentations given at the 1998 ACC Environmental Training Symposium.     

Extended family structure in the ant Formica paralugubris: the role of the breeding system

In populations of various ant species, many queens reproduce in the same nest (polygyny), and colony boundaries appear to be absent with individuals able to move freely between nests (unicoloniality). Such societies depart strongly from a simple family structure and pose a potential challenge to kin selection theory, because high queen number coupled with unrestricted gene flow among nests should result in levels of relatedness among nestmates close to zero. This study investigated the breeding system and genetic structure of a highly polygynous and largely unicolonial population of the wood ant Formica paralugubris. A microsatellite analysis revealed that nestmate workers, reproductive queens and reproductive males (the queens' mates) are all equally related to each other, with relatedness estimates centring around 0.14. This suggests that most of the queens and males reproducing in the study population had mated within or close to their natal nest, and that the queens did not disperse far after mating. We developed a theoretical model to investigate how the breeding system affects the relatedness structure of polygynous colonies. By combining the model and our empirical data, it was estimated that about 99.8% of the reproducing queens and males originated from within the nest, or from a nearby nest. This high rate of local mating and the rarity of long-distance dispersal maintain significant relatedness among nestmates, and contrast with the common view that unicoloniality is coupled with unrestricted gene flow among nests. Received: 8 February 1999 / Received in revised form: 15 June 1999 / Accepted: 19 June 1999     

Seasonal and annual distribution of organic contaminants in marine sediments from Elkhorn slough, moss landing harbor and nearshore Monterey Bay, California

This 3-year study provides data on the spatial, seasonal and annual variability of hydrocarbons and total organic carbon present in marine sediments at three sites: Elkhorn Slough, Moss Landing Harbor and nearshore Monterey Bay in the vicinity of Moss Landing, California. The study provides baseline information that could be used to evaluate the potential impacts of future fuel oil releases occuring in the Moss Landing area. Groups of hydrocarbons were chosen to represent the hydrocarbon inputs into the Moss Landing area. These included the pesticide dichlorodiphenyltrichloroethane (DDT), polychlorinated biphenyl (PCB), phthalic acid ester (PAE), polycyclic aromatic hydrocarbon (PAH) and combustion PAHs (SigmaCOMBs). For SigmaDDTs, SigmaPCBs, SigmaPAEs, SigmaPAHs and SigmaCOMBs, the major sources of variability were between sites and random effects. Subsites within each site contributed little variability. No significant seasonal differences in any chemical contaminant group were found at any site. Significant seasonal differences in total organic carbon (TOC) and significant annual differences in SigmaPCBs, SigmaPAHs, SigmaCOMBs and SigmaPAEs were found at the nearshore Monterey Bay site. Significant annual differences in SigmaPAEs and TOC were found within Moss Landing Harbor, and significant annual differences in SigmaPAEs were found within the Elkhorn Slough site. Implications for future sampling designs in the Moss Landing area are that given the current baseline conditions (a stable, low rate of hydrocarbon input), a variability of 75-150 m(2) may not need to be heavily sampled. Spatial variability, not seasonal or annual variability, is the major source of hydrocarbon variability in Moss Landing sediments, although 3 years may not be long enough to establish long-term annual trends. Further research to determine the SigmaPAH spatial sampling scale for oil spills is needed.     

Mixed-function oxidase-specific activity in wild and caged speckled sanddabs Citharichthys stigmaeus in Elkhorn Slough, Moss Landing Harbor and nearshore Monterey Bay, California

The goal of this study was to characterize the spatial, seasonal and annual hepatic activities of mixed-function oxidase (MFO) in the speckled sanddab Citharichthys stigmaeus, the most common fish in the Moss Landing area. In addition, techniques to monitor MFO activities in caged speckled sanddabs were developed and tested. Once the relationship between MFO activities in caged and wild fish populations is determined, caged fish could be used to monitor potential hydrocarbon impacts at Moss Landing, or other marine sites. During each of the spatial, seasonal and annual sediment samplings conducted in 1985-1987 as part of a separate hydrocarbon variability study at Moss Landing, 12 wild speckled sanddabs were collected from Moss Landing Harbor, Elkhorn Slough and nearshore Monterey Bay sites. In addition, four locations were chosen for a 14-day field caged fish experiment. The caged fish experiments successfully demonstrated the feasibility of using caged sanddabs as indicators of hydrocarbon exposure. The major source of variability in hepatic aryl hydrocarbon hydroxylase activity in wild speckled sanddabs from the Moss Landing area is due to seasonal rather than site differences. Significant relationships between caged fish MFO response and sediment hydrocarbon concentrations were found. It is possible that caged fish could be used in place of costly sediment sampling and analysis, and provide a more direct method to assess biological impacts. Many of the caging techniques demonstrated in this study can easily be transferred to other benthic flatfish, and other marine and freshwater environments.