Colonization of the Southern Patagonia Ocean by Exotic Chinook Salmon

Abstract:  Anadromous salmonids have been particularly successful at establishing wild populations in southern Patagonia, in contrast to their limited success elsewhere outside their native ranges. The most recent such discovery is a spawning population of Chinook salmon in the Santa Cruz River, which flows into the Atlantic Ocean from Argentina. We used mitochondrial DNA analysis to discriminate between alternative potential sources of this population and were able to discard in situ introductions of fish imported directly from California in the early twentieth century. Our results showed that the fish most likely came from Puget Sound, Washington, imported into southern Chile for salmon-ranching experiments in the 1980s. This finding provides concrete evidence of colonization of Atlantic rivers from Pacific locations. The southern Pacific and Atlantic oceans provide a favorable marine environment for the success of invading salmon. In particular, the waters associated with fjords, southern channels, and the inshore portion of the Patagonian shelf provide a rather bounded, continuous waterway for exotic anadromous salmonids, rich in diverse forage species.     

The Effectiveness of Iberian Protected Areas in Conserving Terrestrial Biodiversity

Abstract:  The Iberian Peninsula harbors about 50% of European plant and terrestrial vertebrate species and more than 30% of European endemic species. Despite the global recognition of its importance, the selection of protected areas has been ad hoc and the effectiveness of such choices has rarely been assessed. We compiled the most comprehensive distributional data set of Iberian terrestrial plant and vertebrate species available to date and used it to assess the degree of species representation within existing protected areas. Existing protected areas in Spain and Portugal reasonably represented the plant and animal species we considered (73–98%). Nevertheless, species of some groups (amphibians, reptiles, birds, and gymnosperms) did not accumulate in protected areas at a rate higher than expected by chance ( p > 0.05). We determined that to conserve all vertebrate and plant species in the Iberian Peninsula, at least 36 additional areas are needed. Selection of additional areas for conservation would be facilitated if such areas coincided with sites of community importance (SCI) designated under the European Commission Habitats Directive. Additional areas required for full representation of the selected plant and animal species all coincide with SCI in Spain. Nevertheless, the degree of coincidence varies between 0.3% and 74.6%, and there is a possibility that important areas for conservation occur outside the SCI. Our results support the view that current SCI can be used for prioritization of areas for conservation, but a systematic reevaluation of conservation priorities in Spain and Portugal would be necessary to ensure that effective conservation of one of European's most important biodiversity regions is achieved.     

Key Role of European Rabbits in the Conservation of the Western Mediterranean Basin Hotspot

Abstract: The Mediterranean Basin is a global hotspot of biodiversity. Hotspots are said to be experiencing a major loss of habitat, but an added risk could be the decline of some species having a special role in ecological relationships of the system. We reviewed the role of European rabbits (Oryctolagus cuniculus) as a keystone species in the Iberian Peninsula portion of the Mediterranean hotspot. Rabbits conspicuously alter plant species composition and vegetation structure through grazing and seed dispersal, which creates open areas and preserves plant species diversity. Moreover, rabbit latrines have a demonstrable effect on soil fertility and plant growth and provide new feeding resources for many invertebrate species. Rabbit burrows provide nest sites and shelter for vertebrates and invertebrates. In addition, rabbits serve as prey for a number of predators, including the critically endangered Iberian lynx (Lynx pardinus) and Spanish Imperial Eagle (Aquila adalberti). Thus, the Mediterranean ecosystem of the Iberian Peninsula should be termed “the rabbit's ecosystem.” To our knowledge, this is the first empirical support for existence of a multifunctional keystone species in a global hotspot of biodiversity. Rabbit populations have declined drastically on the Iberian Peninsula, with potential cascading effects and serious ecological and economic consequences. From this perspective, rabbit recovery is one of the biggest challenges for conservation of the Mediterranean Basin hotspot.     

Preserving Population Allele Frequencies in Ex Situ Conservation Programs

Abstract: Optimization of contributions of parents to progeny by minimizing the average coancestry of the progeny is an effective strategy for maintaining genetic diversity in ex situ conservation programs, but its application on the basis of molecular markers has the negative collateral effect of homogenizing the allelic frequencies at each locus. Because one of the objectives of a conservation program is to preserve the genetic composition of the original endangered population, we devised a method in which markers are used to maintain the allele frequency distribution at each locus as closely as possible to that of the native population. Contributions of parents were obtained so as to minimize changes in allele frequency for a set of molecular markers in a population of reduced size. We used computer simulations, under a range of scenarios, to assess the effectiveness of the method in comparison with methods in which contributions of minimum coancestry are sought, either making use of molecular markers or genealogical information. Our simulations indicated that the proposed method effectively maintained the original distribution of allele frequencies, particularly under strong linkage, and maintained acceptable levels of genetic diversity in the population. Nevertheless, contributions of minimum coancestry determined from pedigree information but ignoring the genealogy previous to the conservation program, was the most effective method for maintaining allelic frequencies in realistic situations.     

Asymptotics in adaptive cluster sampling

In this article we consider asymptotic properties of the Horvitz-Thompson and Hansen-Hurwitz types of estimators under the adaptive cluster sampling variants obtained by selecting the initial sample by simple random sampling without replacement and by unequal probability sampling with replacement. We develop an asymptotic framework, which basically assumes that the number of units in the initial sample, as well as the number of units and networks in the population tend to infinity, but that the network sizes are bounded. Using this framework we prove that under each of the two variants of adaptive sampling above mentioned, both the Horvitz-Thompson and Hansen-Hurwitz types of estimators are design-consistent and asymptotically normally distributed. In addition we show that the ordinary estimators of their variances are also design-consistent estimators.     

The Near Extinction of Two Large European Predators: Super Specialists Pay a Price

Abstract:  Despite recovery plans, the Spanish Imperial Eagle ( Aquila adalberti ) and the Iberian lynx ( Lynx pardinus ) are in danger of extinction. These two flagship species tend to occur in pristine Mediterranean forests, and both prey preferentially on the rabbit ( Oryctologus cuniculus ). Spanish lynxes and eagles have sister species in continental Europe, the Eurasian lynx (  Lynx europaeus ) and the Eastern Imperial Eagle ( A. heliaca ), respectively. Recent genetic evidence indicates that these two pairs of species started to diverge from their ancestor species slightly less than 1 million years ago, when the longest-lasting Pleistocene glaciations covered Europe. We hypothesize that the Iberian lynx and the Spanish Imperial Eagle emerged as separate species in the Pleistocene refugia of southern Spain, where they hunted yet another locally evolved species, the rabbit, on which they have become dependent for survival. Two large predators that emerged at the same time may go extinct simultaneously because of their inability to shift to alternative prey. Many other relict species, including numerous species from oceanic islands, have naturally small populations because of evolutionary constraints and are permanently threatened with extinction. Recovery plans aimed at putting these species out of danger are unrealistic, as their populations are and have been chronically scarce. We suggest that what these species need are maintenance plans designed to buffer population declines due to either stochastic or human-induced events. A metaphor for this would be "emergency care units" for conservation.     

Species Review of Amphibian Extinction Risks in Madagascar: Conclusions from the Global Amphibian Assessment

Abstract:  We assessed the extinction risks of Malagasy amphibians by evaluating their distribution, occurrence in protected areas, population trends, habitat quality, and prevalence in commercial trade. We estimated and mapped the distribution of each of the 220 described Malagasy species and applied, for the first time, the IUCN Red List categories and criteria to all species described at the time of the assessment. Nine species were categorized as critically endangered, 21 as endangered, and 25 as vulnerable. The most threatened species occur on the High Plateau and/or have been subjected to overcollection for the pet trade, but restricted extent of occurrence and ongoing habitat destruction were identified as the most important factors influencing extinction threats. The two areas with the majority of threatened species were the northern Tsaratanana-Marojejy-Masoala highlands and the southeastern Anosy Mountains. The current system of protected areas includes 82% of the threatened amphibian species. Of the critically endangered species, 6 did not occur in any protected area. For conservation of these species we recommend the creation of a reserve for the species of the Mantella aurantiaca group, the inclusion of two Scaphiophryne species in the Convention on the International Trade in Endangered Species Appendix II, and the suspension of commercial collecting for Mantella cowani . Field surveys during the last 15 years reveal no pervasive extinction of Malagasy amphibians resulting from disease or other agents, as has been reported in some other areas of the world.