Ammonia as confounding factor in toxicity tests with the sea urchin Paracentrotus lividus (Lmk)

The aim of this study was to investigate the toxicity of total ammonia towards sea urchin bioassays, in order to elucidate the role of ammonia as confounding factor in sediment quality assessment studies. New toxicity data, expressed as EC50, NOEC and LOEC are reported for Paracentrotus lividus based on experiments at differing pH values. Results confirmed that sperm cell toxicity test is not very sensitive to ammonia, while total ammonia embryotoxicity is strictly pH dependent. Accurate observations of embryotoxic effects at increasing total ammonia concentrations evidenced progressive shifts from malformed plutei to gastrula and blastula blockages. Toxicity data obtained for P. lividus are comparable with previous results with other echinoid species.     

Higher sorption of arsenate versus arsenite on amorphous Al-oxide, effect of ligands

Arsenic pollution is currently a major health issue because As is toxic for human beings, animals, and plants. Knowledge of As mobility is therefore important to assess health risk. The sorption of arsenite and arsenate on metal oxides in the presence of various anionic ligands is closely linked to the mobility, bioavailability, and risk. It was reported that the sorption mechanisms and characteristics of arsenite and arsenate on Al-oxides were different from that on Fe-oxides. Previous work reports the sorption of arsenite and arsenate on Fe-oxides in the presence of ligands. Whereas there is few knowledge on the sorption of arsenite and arsenate by Al-oxides in the presence of ligands. Here, we studied the sorption of arsenite and arsenate on amorphous Al-oxide by batch experiments. We tested the effect of organic ligands: oxalate, malate, tartrate, citrate; and inorganic ligands: sulfate, phosphate, selenate, selenite. Results show that amorphous Al-oxide has more sorption affinity for arsenate than arsenite. The inhibition of As sorption by ligands at pH 6 is higher for arsenite than arsenate. For arsenite, the As sorption inhibition decreases in the order phosphate, citrate, malate, selenite, oxalate, tartrate, sulfate, and selenate. For arsenate, the As sorption inhibition decreases in the order phosphate, malate, citrate, selenite, tartrate, oxalate, sulfate, and selenate.     

Transcending scale dependence in identifying habitat with resource selection functions

Multi-scale resource selection modeling is used to identify factors that limit species distributions across scales of space and time. This multi-scale nature of habitat suitability complicates the translation of inferences to single, spatial depictions of habitat required for conservation of species. We estimated resource selection functions (RSFs) across three scales for a threatened ungulate, woodland caribou (Rangifer tarandus caribou), with two objectives: (1) to infer the relative effects of two forms of anthropogenic disturbance (forestry and linear features) on woodland caribou distributions at multiple scales and (2) to estimate scale-integrated resource selection functions (SRSFs) that synthesize results across scales for management-oriented habitat suitability mapping. We found a previously undocumented scale-specific switch in woodland caribou response to two forms of anthropogenic disturbance. Caribou avoided forestry cut-blocks at broad scales according to first- and second-order RSFs and avoided linear features at fine scales according to third-order RSFs, corroborating predictions developed according to predator-mediated effects of each disturbance type. Additionally, a single SRSF validated as well as each of three single-scale RSFs when estimating habitat suitability across three different spatial scales of prediction. We demonstrate that a single SRSF can be applied to predict relative habitat suitability at both local and landscape scales in support of critical habitat identification and species recovery.     

Cryptic species within the commercially most important lobster in the tropical Atlantic, the spiny lobster Panulirus argus

Panulirus argus (Latreille in Ann Mus Hist Nat Paris 3:388–395, 1804) is the lobster of greatest economic importance throughout its distribution. In this study, mitochondrial (Cytochrome Oxidase I and 16S ribosomal genes) and nuclear (Adenine Nucleotide Transporter gene) sequences were used to evaluate the taxonomic status of P. argus sampled from five sites in the Caribbean Sea and nine sites in the Southwest Atlantic. Phylogenetic analyses indicate that lobsters from the two regions form two monophyletic groups with a molecular divergence similar to that observed between distinct congeneric lobster species and much larger than that found between conspecific lobster populations. Therefore, the Caribbean and the Southwest Atlantic lobster populations originally attributed to P. argus belong to different species, with an estimated time of isolation of around 16 Million years. An important consequence of these findings is that the fisheries of spiny lobsters from the Caribbean and the Southwest Atlantic species must be managed separately.     

Volatile organic compounds of Acacia longifolia and their effects on germination and early growth of species from invaded habitats

Acacia longifolia, a highly invasive species that invades coastal ecosystems in Mediterranean areas, produces significant impacts at different scales. Abundant foliage and thick canopies create a dense atmosphere that led us to hypothesise that the release of volatile organic compounds (VOCs) could play a role in the reduction of biodiversity observed in invaded areas. Therefore, we suggested that VOCs emitted by A. longifolia could exert inhibitory effects on physiological and biochemical parameters of native species. Using glass chamber bioassays, we evaluated the effect of aerial contact between VOCs from different plant parts of A. longifolia material and some native species. Volatile chemical composition was further analysed using GC-MS. Our results indicated that VOCs produced a notably reduction of seed germination. Furthermore, volatiles from leaves and flowers significantly decreased root length, shoot length and biomass for all species. Proline and malondialdehyde content did not significantly increase after contact with VOCs. Finally, chemical profile of VOCs from flowers, leaves and litter was significantly different, both qualitatively and quantitatively. As far as we know, our results constitute the first evidence of phytotoxicity induced by VOCs from A. longifolia, suggesting that flowers and leaves could influence its surrounding environment through VOCs release.     

Evaluation of geomorphic changes and retreat rates of a coastal pyroclastic cliff in the Campi Flegrei volcanic district,southern Italy

Geomorphic evolution of sea cliffs has significant impact on coastal settlements worldwide, so that evaluation of cliff instability processes, failure factors, and retreat rates involves a growing number of scientists for coastal risk and management purposes. Aerial photogrammetry and lidar are among the most used techniques for topographic characterization and geomorphic monitoring of coastal environments. A crucial role in the combined use of such techniques is the evaluation of different spatial accuracy and co-registration between derived terrain models, so that a robust error analysis is required. In this study, we present a change detection analysis of the Torrefumo coastal cliff, in the Campi Flegrei volcanic area (Southern Italy). Aerial images taken in 1956 and 1974, processed through digital photogrammetry, and an airborne lidar point cloud acquired in 2008 were used to produce Digital Elevation Models of the cliff. The analysis was based on the multi-temporal comparison of these models and included the calculation of volumetric changes and average retreat rates of the cliff face with reference to the 1956–1974 and 1974–2008 time intervals. The spatially variable elevation uncertainty of each Digital Elevation Model was evaluated with a probabilistic approach based on the fuzzy set theory. The results of this study showed significant eroded volumes during the period 1956–1974 and relatively smaller volumes in the 1974–2008 time span, with mean annual retreat rates of 1.2 m/year and 0.17 m/year, respectively. We infer that the significant decrease of erosion characterizing the second period was induced by the sheltering effect at the base of the cliff produced by the construction of a seawall in the early 80’s.     

Phototransformation of <Emphasis Type="SmallCaps">l</Emphasis>-tryptophan and formation of humic substances in water

Humic substances are poorly known, though they represent a major pool of non-biotic organic carbon on earth. In particular, there is little knowledge on the formation of humic substances by irradiation of organic matter dissolved in waters. Specifically, it is known that humic substances can be formed from proteins by photochemical processes in surface waters, but the role of single amino acids and their transformation pathways are not yet known. Therefore, here we studied the phototransformation of aqueous l-tryptophan under simulated sunlight. Irradiated l-tryptophan solutions were analyzed by absorption, fluorescence, nuclear magnetic resonance (NMR) and electron paramagnetic resonance (EPR) spectroscopies, chromatography, potentiometry and mass spectrometry (MS). The solutions appeared turbid after irradiation; therefore, nephelometry and dynamic laser light scattering were used to characterize the suspended particles. Results show that about 95% of l-tryptophan was degraded in 8-h irradiation, undergoing deamination and decarboxylation of the amino acidic moieties to release ammonium and formate. The MS signal at m/z 146 suggests the formation of 3-ethylindole, while pH-metric and NMR data revealed the presence of hydroxylated compounds. The phototransformation intermediates of l-tryptophan had fluorescence and absorption spectra similar to those of humic substances, they were able to produce ^·OH upon irradiation and tended to aggregate by both ionic and hydrophobic interactions. Overall, our findings reveal for the first time the nature of products formed upon phototransformation of l-tryptophan. Interestingly, the transformation of l-tryptophan is quite different from that of the previously studied l-tyrosine, although both compounds produce humic-like materials under irradiation.     

How humans shape wolf behavior in Banff and Kootenay National Parks, Canada

This paper describes the conceptualization and implementation of an agent-based model to investigate how varying levels of human presence could affect elements of wolf behavior, including highway crossings; use of areas in proximity to roads and trails; size of home ranges; activities, such as hunting, patrolling, resting, and feeding pups; and survival of individuals in Banff and Kootenay National Parks, Canada. The model consists of a wolf module as the primary component with five packs represented as cognitive agents, and grizzly bear, elk, and human modules that represent dynamic components of the environment. A set of environmental data layers was used to develop a friction model that serves as a base map representing the landscape over which wolves moved. A decision model was built to simulate the sequence of wolf activities. The model was implemented in a Java Programming Language using RePast, an agent-based modeling library. Six months of wolf activities were simulated from April 16 to October 15 (i.e., a season coherent with regard to known wolf behaviors), and calibrated with GPS data from wolf radiocollars (n = 15) deployed from 2002 to 2004. Results showed that the simulated trajectories of wolf movements were correlated with the observed trajectories (Spearman's rho 0.566, P < 0.001); other critical behaviors, such as time spent at the den and not traveling were also correlated. The simulations revealed that wolf movements and behaviors were noticeably affected by the intensity of human presence. The packs’ home ranges shrank and wolves crossed highways less frequently with increased human presence. In an extreme example, a wolf pack whose home range is traversed by a high-traffic-volume highway was extirpated due to inability to hunt successfully under a scenario wherein human presence levels were increased 10-fold. The modeling prototype developed in this study may serve as a tool to test hypotheses about human effects on wolves and on other mammals, and guide decision-makers in designing management strategies that minimize impacts on wolves and on other species functionally related to wolves in the ecosystem.     

Secondary sexual characters signal fighting ability and determine social rank in Alpine ibex (Capra ibex)

Social dominance is a fundamental aspect of male evolutionary ecology in polygynous mammals because it determines access to estrous females. As it is rarely possible to monitor marked individuals of known morphology, little is known about the determinants of male dominance. We studied the social structure of Alpine ibex males in Gran Paradiso National Park, Italy in 2003, 2006, and 2007. Dominance interactions produced a linear social hierarchy. In ibex males, body mass and horn length are key traits in male-male combat, and both increase with age. We explored the links between age, body mass, horn length, and social rank. Ibex males showed much age-independent phenotypic heterogeneity and rapidly growing males reached high rank at a younger age than slow-growing males. Because there is no trade-off between horn growth and longevity, fast-growing males may face weak potential costs of rapid growth and high fitness benefit of achieving high rank. Violent interactions were more likely to occur between males similar in both mass and horn length, independently of age. We suggest that only high-quality individuals can afford a strategy of rapid growth for both secondary sexual characters, and likely reap substantial fitness benefits.     

The three-dimensionality of obstructed shear flows

Obstructed shear flows (i.e. those over permeable media) are common in the environment. An archetypal example, flow over a submerged vegetation canopy, is investigated here. Like any flow through complex geometry, canopy flows are characterised by strong spatial gradients. The focus of this experimental study is the three-dimensionality of aquatic canopy flow, in particular that of the coherent interfacial vortices that govern mixing into and out of the canopy. It is shown here that the vortices have a finite lateral scale that is comparable to their vertical scale; both are of the order of the drag length scale of the canopy, (C _D a)⁻¹, where a is the frontal area density and C _D is a bulk drag coefficient. The finite lateral extent of the vortices generates strong lateral hydrodynamic gradients, both instantaneously and in the long-term. The instantaneous gradients, which can contribute greatly to the dispersion of dissolved and particulate species, are far more pronounced. Finally, the potential for canopies to generate differential roughness secondary circulation is examined. In the consideration of vertical scalar transport, this circulation can be of the same order as turbulent diffusion.