Repeatability of physiological traits in juvenile Pacific abalone, Haliotis discus hannai

Several studies on individual physiological traits assume that past records may predict future performance. Marine mollusks, as other animals, show a wide range of between- and within-individual variation of physiological traits. However, in this group, almost nothing is known about the relative influence of genetic factors on that variation. Repeatability (R) is a measure of the consistency of the variation of a trait, which includes its genetic variance and represents the maximum potential value of its heritability (h ²). Traits that show high inter-individual variation and high repeatability levels could potentially evolve through selection (natural or artificial). We estimated the repeatability [using intra-class (τ) and Pearson-moment (r) correlation coefficients] of several physiological traits related to energy acquisition and allocation in juvenile Pacific abalone Haliotis discus hannai, maintained under controlled environment growing systems. In order to estimate the range of the R values and the effect of the time elapsed between measurements on these estimates, we measured these traits monthly during 6 months for each individual. Among the physiological traits, those related to energy allocation like oxygen consumption (standard metabolic rate, SMR) and ammonium excretion rates, and oxygen/nitrogen ratio (O/N), showed intermediate levels of repeatability (0.48, 0.55 and 0.39, respectively), when this was estimated by τ coefficient. However, the r estimation showed that SMR and O/N repeatability were significant and high (0.6–0.7 and 0.5–0.7, respectively) during the first 5 consecutive measurements, decreasing strongly (0.3 and 0.2, respectively) during the last measurement. For ammonia excretion, although repeatability (r) decreased from 0.8 to 0.5 during the 6 consecutive measurements, they remain significant during the experimental period. Therefore, our results indicate that for H. discus hannai juveniles, physiological traits like SMR, ammonia excretion and O/N are significantly repeatable (i.e. good predictors of future measurements) during a period of 4–5 months. These significant repeatability values suggest an important genetic control upon the phenotypic variation of these physiological traits, and could potentially respond to natural or artificial selection, and be used in genetic improvement programs. By contrast, those traits related to energy acquisition (i.e. ingestion, absorption and assimilation) and physiological efficiencies (i.e. net growth and scope for growth) showed very low levels of repeatability (0–0.07). This indicates that the phenotypic variation of these traits would be more influenced by environment rather than by genetic factors.     

Stress-related ecophysiology of members of the genus Rhodanobacter isolated from a mixed waste contaminated subsurface

• Rhodanobacter spp. are dominant in acidic, high nitrate and metal contaminated sites. • Dominance of Rhodanobacter is likely due to tolerance to low pH and heavy metals. • High organic content increases stress tolerance capacity. • Longer incubation time is critical for accurate assessment of MIC (various stresses). This work examines the physiologic basis of stress tolerance in bacterial strains of the genus Rhodanobacter that dominate in the acidic and highly metal contaminated near-source subsurface zone of the Oak Ridge Integrated Field Research Challenge (ORIFRC) site. Tolerance of R. denitrificans to levels of different stresses were studied in synthetic groundwater medium and R2A broth. Two strains of R. denitrificans, strains 2APBS1^T and 116-2, tolerate low to circumneutral pH (4–8), high Uranium (1 mmol/L), elevated levels of nitrate (400 mmol/L) and high NaCl (2.5%). A combination of physiologic traits, such as growth at low pH, increased growth in the presence of high organics concentration, and tolerance of high concentrations of nitrate, NaCl and heavy metals is likely responsible for dominance of Rhodanobacter at the ORIFRC site. Furthermore, extended incubation times and use of low carbon media, better approximating site groundwater conditions, are critical for accurate determination of stress responses. This study expands knowledge of the ecophysiology of bacteria from the genus Rhodanobacter and identifies methodological approaches necessary for acquiring accurate tolerance data.     

Interlaboratory comparison exercise for the analysis of PCDD/Fs in samples of digested sewage sludge

Five UK laboratories participated in a study designed to explore the principal sources of interlaboratory variation in the analysis of PCDD/Fs in sewage sludge. Samples of wet sludge, dry sludge, toluene extract of sludge and cleaned extract of sludge were prepared by an organising laboratory. The samples were analysed in duplicate by each laboratory along with a solution of PCDD/F standards and reference sediment. Mean coefficients of variation between laboratories were 45% for the wet sludge, 33% for the dry sludge, 32% for the extract of sludge, 36% for the cleaned extract of sludge, 32% for the reference sediment and 28% for the standard solution. The results were subjected to statistical analysis, which showed that there was no specific part of the analysis that introduced a dominant part of the variation. The spread of data generated from the analysis of wet sludge samples was not appreciably greater than the spread for the analysis of cleaned extracts. Thus the drying, extraction and clean up processes in the PCDD/F analysis of wet sludge did not have a dramatic effect on the interlaboratory variation.     

Biologically directed environmental monitoring, fate, and transport of estrogenic endocrine disrupting compounds in water: A review

Endocrine disrupting compounds (EDCs) are contaminants that may be hormonally active at low concentrations and are emerging as a major concern for water quality. Estrogenic EDCs (e-EDCs) are a subclass of EDCs that, when organisms are exposed to them, function as estrogens. Given that there are numerous e-EDCs that can negatively affect humans and wildlife, general screening techniques like biologically based assays (BBAs) may provide major advantages by estimating the total estrogenic effects of many e-EDCs in the environment. These techniques may potentially be adapted for field portable biologically directed sampling and analyses. This article summarizes available BBAs used to measure estrogenic e-EDCs in the environmental samples and also presents results relating to fate and transport of e-EDCs. Estrogenic EDCs appear to be almost ubiquitous in the environment, despite low solubility and high affinity of organic matter. Potential transport mechanisms may include: (1) transport of more soluble precursors, (2) colloid facilitated transport, (3) enhanced solubility through elevated pH, and (4) the formation of micelles by longer-chain ethoxylates. Due to their persistent and ubiquitous nature, source control strategies for e-EDCs may reduce influent concentration to wastewater treatment plants so that the post treatment effluent will decrease concentrations to estrogenically inactive levels. Alternatively if source reduction is not possible, then more testing is needed on tertiary treatment technologies and treatment efficiencies for e-EDCs. There is still a need for research on remediation and restoration approaches for habitats disturbed by elevated e-EDC concentrations.     

Ground cover impacts on nitrogen export from manured riparian pasture

Maintaining ground cover of forages may reduce the export of nitrogen (N) from pastures. The objective of this work was to determine the effect of ground cover on N export from pastured riparian areas receiving simulated rainfall. Plots were established on two adjacent sites in the North Carolina Piedmont: one of 10% slope with Appling sandy loam soils and a second of 20% slope with Wedowee sandy loam soils. Both sites had existing mixed tall fescue (Festuca arundinacea Schreb.)-dallisgrass (Paspalum dilatatum Poir.) vegetation. Forage stands were modified to represent a range of ground cover levels: 0, 45, 70, and 95% (bare ground, low, medium, and high cover, respectively), and amended with beef steer (Bos taurus) feces and urine (approximately 200 kg N ha-1). For all rain events combined, mean nitrate N export was greatest from bare ground and was reduced by 34% at low cover, which did not differ from high cover. Mean ammonium N export was slightly elevated (approximately 1.37 kg N ha-1) in months when manures were applied and negligible (<0.02 kg N ha-1) in all other months. For all rain events combined, mean export of total N was greatest from bare ground and was reduced by at least 85% at all other cover levels. Whereas site did not impact N export, results indicated that cover and time of rainfall following manure deposition are important determinants of the impact of riparian grazing.     

Assessing strategies to reconcile agriculture and bird conservation in the temperate grasslands of South America

Globally, agriculture is the greatest source of threat to biodiversity, through both ongoing conversion of natural habitat and intensification of existing farmland. Land sparing and land sharing have been suggested as alternative approaches to reconcile this threat with the need for land to produce food. To examine which approach holds most promise for grassland species, we examined how bird population densities changed with farm yield (production per unit area) in the Campos of Brazil and Uruguay. We obtained information on biodiversity and crop yields from 24 sites that differed in agricultural yield. Density–yield functions were fitted for 121 bird species to describe the response of population densities to increasing farm yield, measured in terms of both food energy and profit. We categorized individual species according to how their population changed across the yield gradient as being positively or negatively affected by farming and according to whether the species’ total population size was greater under land‐sparing, land‐sharing, or an intermediate strategy. Irrespective of the yield, most species were negatively affected by farming. Increasing yields reduced densities of approximately 80% of bird species. We estimated land sparing would result in larger populations than other sorts of strategies for 67% to 70% of negatively affected species, given current production levels, including three threatened species. This suggests that increasing yields in some areas while reducing grazing to low levels elsewhere may be the best option for bird conservation in these grasslands. Implementing such an approach would require conservation and production policies to be explicitly linked to support yield increases in farmed areas and concurrently guarantee that larger areas of lightly grazed natural grasslands are set aside for conservation.     

Farmers' perceptions of constraints to plantain production in Ghana

SUMMARY

Plantain (Musa AAB), a primary food crop in Ghana, is a key component in sustainable agricultural systems in high rainfall zones. Recently, there has been a substantial yield decline and reduction in plantation life. To elucidate the context in which intervention strategies should be developed, a Participatory Rural Appraisal (PRA) was conducted at five villages in the major plantain-producing belt of Ghana. The importance of plantain as a preferred food was confirmed, although farmers tended to sell plantain for cash income, using cheaper, less preferred alternatives for home consumption. Farmers identified decreasing soil fertility, the high cost of labour for weeding, pests and diseases, lack of good quality planting material and marketing-related issues as the major production constraints. Due to declining productivity in less fertile regions, plantain has been replaced with other food crops such as cassava and maize. Farmers overestimated the importance of insect pests but were unaware of the extensive damage that could be caused by nematodes and the foliar disease, black sigatoka. They observed, however, that pest damage is more severe when soil fertility is poor. Clearly, integrated pest management is likely to be most effective when practiced within the context of cropping systems management; sustainable strategies that are being developed for resource-limited plantain farmers in Ghana are discussed.     

Ecology of toxicity in marine sponges

An investigation of the ecology of toxicity in marine sponges from different latitudes on the North American continent was made. Results indicated that toxicity in sponges increased with decreasing latitude. Three of the 34 species (9%) of sponges from San Juan Island, Washington, USA (48°N), were toxic to fishes. Nine of the 44 species (20%) of sponges from Santa Catalina Island, California, USA (33°N), were toxic. Seven of the 11 species (64%) of sponges from Zihuatanejo Bay, Guerrero, México (17°N), were toxic. Twenty-seven of the 36 species (75%) of sponges from La Blanquilla, Veracruz, México (19°N), were toxic. Most of these toxic sponges are openly exposed to fishes. The most common exposed sponges proved to be highly toxic to fishes. Force-feeding experiments conducted with wrasses demonstrated the effectiveness of the toxin of sponges. A hypothesis is proposed which explains the relationship between species diversity of fishes and sponge toxicity with latitude.