Large-scale green synthesis of Cu nanoparticles

This article reports a novel, eco-friendly herbal method to synthesize Cu nanoparticles in large scales. Cu nanoparticles are an alternative to Ag and Au nanoparticles and have potential applications in many industrial areas. Many synthetic routes have been documented for the preparation of copper nanoparticles, but very few routes are eco-friendly and large-scale. We report here the preparation of Cu nanoparticles from aqueous CuSO₄ using non-toxic and inexpensive materials like curd, milk, and herbal extracts such as tamarind and lemon juice as capping agents. X-ray diffraction and transmission electron microscopy show that produced particles are nanocrystalline copper 20–50 nm in size with a face-centered cubic structure. Fourier-transformed infrared spectroscopy evidences the role of organic acids in the capping process. The novelty of this work is the synthesis of Cu nanoparticles from CuSO₄ without electricity and using non-toxic, cheap capping agents.     

Bayesian hierarchical mixture models for otolith microchemistry analysis

The field of fisheries research commonly uses classical statistical classification methods to estimate the proportion of fish that return to natal spawning grounds to spawn. With the advent of otolith microchemical analysis, researchers are able to extract information from fish ear stones (otoliths) about the chemical composition of water in which fish have spent distinct periods of their lives. Here we present a method of analysis set in the Bayesian statistical paradigm which enables explicit incorporation of habitat information into the analysis. The ecological system is seen as arising from a mixture of disparate fish populations and information from the biological relationships inherent in otolith formation is exploited through the hierarchical model structure. We present the model and motivation, demonstrate the validity of the model through simulation studies, and conclude with an analysis of a data set from Lake Erie.     

Geologic occurrences of erionite in the United States: an emerging national public health concern for respiratory disease

Erionite, a mineral series within the zeolite group, is classified as a Group 1 known respiratory carcinogen. This designation resulted from extremely high incidences of mesothelioma discovered in three small villages from the Cappadocia region of Turkey, where the disease was linked to environmental exposures to fibrous forms of erionite. Natural deposits of erionite, including fibrous forms, have been identified in the past in the western United States. Until recently, these occurrences have generally been overlooked as a potential hazard. In the last several years, concerns have emerged regarding the potential for environmental and occupational exposures to erionite in the United States, such as erionite-bearing gravels in western North Dakota mined and used to surface unpaved roads. As a result, there has been much interest in identifying locations and geologic environments across the United States where erionite occurs naturally. A 1996 U.S. Geological Survey report describing erionite occurrences in the United States has been widely cited as a compilation of all US erionite deposits; however, this compilation only focused on one of several geologic environments in which erionite can form. Also, new occurrences of erionite have been identified in recent years. Using a detailed literature survey, this paper updates and expands the erionite occurrences database, provided in a supplemental file (US_erionite.xls). Epidemiology, public health, and natural hazard studies can incorporate this information on known erionite occurrences and their characteristics. By recognizing that only specific geologic settings and formations are hosts to erionite, this knowledge can be used in developing management plans designed to protect the public.     

Reproductive interference via interspecific pairing in an amphipod species complex

Many species experience reproductive interference defined as interspecific mating interactions that reduce the fitness of individuals in at least one of the species. We examined reproductive interference among three cryptic amphipod species that co-occur in the vegetated zone of lakes. Because these animals form precopulatory pairs and males commonly have indiscriminant mating behavior, we predicted that (1) there would be interspecific pairing, (2) interspecific pairing would be more common when conspecifics were rare, and (3) interspecific pairing would be more common in species combinations where males are larger than females. Using color phenotypes to distinguish species, a novel discovery reported here, we conducted experiments to evaluate patterns of interspecific pairing. In a no-choice experiment (i.e., amphipods had access to mates of only one species), we observed a low rate (5 %) of interspecific pairing and 80 % of these cases involved males that were larger than females. In a second experiment where individuals had access to conspecific mates at varying relative abundance, only 0.04 % of the pairs observed were between heterospecifics, suggesting that the interspecific pairing observed in the no-choice experiment was an artifact of not having access to conspecific mates. Our results suggest that at least one sex has sufficient species-recognition abilities to circumvent the formation of interspecific pairs; therefore, reproductive interference may be minimal in these species.     

Future ocean acidification will be amplified by hypoxia in coastal habitats

Ocean acidification is elicited by anthropogenic carbon dioxide emissions and resulting oceanic uptake of excess CO₂ and might constitute an abiotic stressor powerful enough to alter marine ecosystem structures. For surface waters in gas-exchange equilibrium with the atmosphere, models suggest increases in CO₂ partial pressure (pCO₂) from current values of ca. 390 μatm to ca. 700–1,000 μatm by the end of the century. However, in typically unequilibrated coastal hypoxic regions, much higher pCO₂ values can be expected, as heterotrophic degradation of organic material is necessarily related to the production of CO₂ (i.e., dissolved inorganic carbon). Here, we provide data and estimates that, even under current conditions, maximum pCO₂ values of 1,700–3,200 μatm can easily be reached when all oxygen is consumed at salinities between 35 and 20, respectively. Due to the nonlinear nature of the carbonate system, the approximate doubling of seawater pCO₂ in surface waters due to ocean acidification will most strongly affect coastal hypoxic zones as pCO₂ during hypoxia will increase proportionally: we calculate maximum pCO₂ values of ca. 4,500 μatm at a salinity of 20 (T = 10 °C) and ca. 3,400 μatm at a salinity of 35 (T = 10 °C) when all oxygen is consumed. Upwelling processes can bring these CO₂-enriched waters in contact with shallow water ecosystems and may then affect species performance there as well. We conclude that (1) combined stressor experiments (pCO₂ and pO₂) are largely missing at the moment and that (2) coastal ocean acidification experimental designs need to be closely adjusted to carbonate system variability within the specific habitat. In general, the worldwide spread of coastal hypoxic zones also simultaneously is a spread of CO₂-enriched zones. The magnitude of expected changes in pCO₂ in these regions indicates that coastal systems may be more endangered by future global climate change than previously thought.     

Biological impacts of ocean acidification: a postgraduate perspective on research priorities

Research into the effects of ocean acidification (OA) on marine organisms has greatly increased during the past decade, as realization of the potential dramatic impacts has grown. Studies have revealed the multifarious responses of organisms to OA conditions, indicating a high level of intra- and interspecific variation in species’ ability to accommodate these alterations. If we are to provide policy makers with sound, scientific input regarding the expected consequences of OA, we need a broader understanding of these predicted changes. As a group of 20 multi-disciplinary postgraduate students from around the globe, with a study focus on OA, we are a strong representation of ‘next generation’ scientists in this field. In this unique cumulative paper, we review knowledge gaps in terms of assessing the biological impacts of OA, outlining directions for future research.     

The physiological and molecular responses of larvae from the reef-building coral Pocillopora damicornis exposed to near-future increases in temperature and pCO2

Given the threats of greenhouse gas emissions and a changing climate to marine ecosystems, there is an urgent need to better understand the response of not only adult corals, which are particularly sensitive to environmental changes, but also their larvae, whose mechanisms of acclimation to both temperature increases and ocean acidification are not well understood. Brooded larvae from the reef coral Pocillopora damicornis collected from Nanwan Bay, Southern Taiwan, were exposed to ambient or elevated temperature (25 or 29 °C) and pCO₂ (415 or 635 μatm) in a factorial experiment for 9 days, and a variety of physiological and molecular parameters were measured. Respiration and rubisco protein expression decreased in larvae exposed to elevated temperature, while those incubated at high pCO₂ were larger in size. Collectively, these findings highlight the complex metabolic and molecular responses of this life history stage and the need to integrate our understanding across multiple levels of biological organization. Our results also suggest that for this pocilloporid larval life stage, the impacts of elevated temperature are likely a greater threat under near-future predictions for climate change than ocean acidification.     

Spatial variogram estimation from temporally aggregated seabird count data

Seabird abundance is an important indicator for assessing impact of human activities on the marine environment. However, data collection at sea is time consuming and surveys are carried out over several consecutive days for efficiency reasons. This study investigates the validity of aggregating those data over time to estimate a spatial variogram that is representative for spatial correlation in species abundance. For this purpose we simulate four-day surveys of seabird count data that contain spatial and temporal correlation arising from temporal changes in the spatial pattern of environmental conditions. Estimates of the aggregated spatial variogram are compared to a variogram that would arise when data were collected over a single day. The study reveals that, under changing environmental conditions over surveys days, aggregating data over a four-day survey increases both the non-spatial variation in the data and the scale of spatial correlation in seabird data. Next, the effect of using an aggregated variogram on the statistical power to test the significance of an impact is investigated. The impact concerns a case of establishing an offshore wind farm resulting in seabird displacement. The study shows that both overestimation and underestimation of statistical power occurs, with power estimates differing up to a factor of two. We conclude that the spatial variation in seabird abundance can be misrepresented by using temporally aggregated data. In impact studies, such misrepresentation can lead to erroneous assessments of the ability to detect impact.     

Temporal patterns of settlement, recruitment and post-settlement losses in a rocky reef fish assemblage in the South-Western Mediterranean Sea

Post-settlement events can significantly alter the density distribution of settlers and subsequently the adult population structure. The temporal and inter-annual variability of settlement and the effects of mortality on recruitment were investigated across 2 years in the vicinities of Cabo de Palos–Islas Hormigas Marine Reserve by visual census and light trap sampling. Settlement was seasonal with greater species richness and abundance in summer. Although temporal synchronization was observed between larval supply and settlement, densities of settlers could not be predicted from post-larval abundances. Timing of settlement was consistent between years but with high inter-annual variation in abundance. High mortality (~80 %) and general decoupling between post-larval and settlement stages suggest that early mortality is driving such patterns. Nevertheless, indications of habitat-mediated mortality were found for benthic species such as Symphodus and Diplodus, highlighting the importance of habitat in shaping population demography.     

The importance of solid-phase distribution on the oral bioaccessibility of Ni and Cr in soils overlying Palaeogene basalt lavas, Northern Ireland

Potentially toxic elements (PTEs) including nickel and chromium are often present in soils overlying basalt at concentrations above regulatory guidance values due to the presence of these elements in underlying geology. Oral bioaccessibility testing allows the risk posed by PTEs to human health to be assessed; however, bioaccessibility is controlled by factors including mineralogy, particle size, solid-phase speciation and encapsulation. X-ray diffraction was used to characterise the mineralogy of 12 soil samples overlying Palaeogene basalt lavas in Northern Ireland, and non-specific sequential extraction coupled with chemometric analysis was used to determine the distribution of elements amongst soil components in 3 of these samples. The data obtained were related to total concentration and oral bioaccessible concentration to determine whether a relationship exists between the overall concentrations of PTEs, their bioaccessibility and the soils mineralogy and geochemistry. Gastric phase bioaccessible fraction (BAF %) ranged from 0.4 to 5.4 % for chromium in soils overlying basalt and bioaccessible and total chromium concentrations are positively correlated. In contrast, the range of gastric phase BAF for nickel was greater (1.4–43.8 %), while no significant correlation was observed between bioaccessible and total nickel concentrations. However, nickel BAF was inversely correlated with total concentration. Solid-phase fractionation information showed that bioaccessible nickel was associated with calcium carbonate, aluminium oxide, iron oxide and clay-related components, while bioaccessible chromium was associated with clay-related components. This suggests that weathering significantly affects nickel bioaccessibility, but does not have the same effect on the bioaccessibility of chromium.