Gaudeamus lavocati sp. nov. (Rodentia, Hystricognathi) from the early Oligocene of Zallah, Libya: first African caviomorph?

A new African species of hystricognathous rodent, Gaudeamus lavocati sp. nov., is described herein from the early Oligocene deposits of Zallah locality (Sirt basin, Central Libya). The dental morphology of this species is very close to that of some earliest South American caviomorphs. It allows a reinterpretation of molar crest homologies among earliest caviomorphs, pentalophodonty being confirmed as the plesiomorphic molar condition in Caviomorpha. This morphological resemblance argues for close affinities between Gaudeamus and earliest South American hystricognaths. Cladistic analysis supports Gaudeamus lavocati sp. nov. as the first known African representative of Caviomorpha, implying that its ancestors were part of the African phiomyid group that crossed the South Atlantic by a direct immigration route. Alternatively, the series of derived dental features of Gaudeamus could also be interpreted as evolutionary synchronous convergences of an African hystricognath lineage towards the specialized pattern of some caviomorphs. However, the high level of similarities concerning teeth morphology and enamel microstructure and the similar age of fossiliferous strata on both continents make this interpretation less probable. The phylogenetic position of this taxon is of considerable importance because it represents an enigmatic component of the phiomorph–caviomorph radiation in Africa and appears as a new clue toward the understanding of caviomorph origins.     

The amniotic fluid as a source of mesenchymal stem cells with lung-specific characteristics

The amniotic fluid is a clinically accessible source of mesenchymal stem cells (AF-MSC) during gestation, which enables autologous cellular therapy for perinatal disorders. The origin of AF-MSC remains elusive: renal and neuronal progenitors have been isolated from the AF-MSC pool, yet no cells with pulmonary characteristics. We analyzed gene expression of pulmonary and renal markers of 212 clonal lines of AF-MSC isolated from amniocentesis samples. AF-MSC were cultured on dishes coated with extracellular matrix (ECM) proteins from decellularized fetal rabbit lungs. In vivo differentiation potential of AF-MSC that expressed markers suggestive of lung fate was tested by renal subcapsular injections in immunodeficient mice. Of all the isolated AF-MSC lines, 26% were positive for lung endodermal markers FOXA2 and NKX2.1 and lacked expression of renal markers (KSP). This AF-MSC subpopulation expressed other lung-specific factors, including IRX1, P63, FOXP2, LGR6, SFTC, and PDPN. Pulmonary marker expression decreased over passages when AF-MSC were cultured under conventional conditions, yet remained more stable when culturing the cells on lung ECM-coated dishes. Renal subcapsular injection of AF-MSC expressing lung-specific markers resulted in engrafted cells that were SPTB positive. These data suggest that FOXA2+/NKX2.1+/KSP- AF-MSC lines have lung characteristics which are supported by culture on lung ECM-coated dishes.     

The solitary median maxillary central incisor (SMMCI) syndrome: Associations,prenatal diagnosis,and outcomes

Solitary median maxillary central incisor (SMMCI) syndrome is a complex disorder consisting of multiple, developmental defects involving midline structures of the head, which includes the cranial bones, the maxilla, and its container dentition (specifically the central incisor tooth germ), together with other midline structures of the body. SMMCI may appear as an isolated trait or in association with other midline developmental anomalies. We describe the case of a patient with SMMCI. He presented with a solitary median maxillary incisor, short stature, corpus callosum anomalies and a microform of holoprosencephaly (HPE), diabetes insipidus, and neurodevelopmental delay. The diagnosis was performed postnatally based on clinical features, radiological imaging, and a comprehensive genetic study. SMMCI can be diagnosed during the prenatal or neonatal periods or during infancy. Evaluation of the superior maxillary bone is important for prenatal diagnosis. Direct evaluation through bidimensional ultrasound or the use of multiplanar ultrasound or tridimensional reconstruction should be performed in cases of brain or face malformations. Early diagnosis can contribute to improved prenatal assessment and postnatal management.     

Mitigating GHG Emissions in the Humid Tropics: Case Studies from the Alternatives to Slash-and-Burn Program (ASB)

Tropical forest conversion contributes as much as 25% of the net annual CO₂ emissions and up to 10% of the N_2O emissions to the atmosphere. The net effect on global warming potential (GWP) also depends on the net fluxes of greenhouse gases from land-use systems following deforestation. Efforts to mitigate these effects must take into account not only the greenhouse gas fluxes of alternative land-use systems but also the social and economic consequences that influence their widespread adoption. The global alternatives to slash-and-burn program (ASB) investigated the net greenhouse gas emissions and profitability of a range of land-use alternatives in the humid tropics. The analysis showed that many tree-based systems reduced net GWP compared to annual cropping and pasture systems. Some of these systems are also profitable in terms of returns to land and labor. The widespread adoption of these systems, however, can be limited by start-up costs, credit limitations, and number of years to positive cash flow, in addition to the higher labor requirements. Projects that offset carbon emissions through carbon sinks in land use in the tropics might be a means of overcoming these limitations. A synthesis of the findings from this program can provide guidelines for the selection and promotion of land-use practices that minimize net global warming effects of slash-and-burn.     

Changing Species Richness and Composition in Canadian National Parks

Abstract: Canada's national parks and their surrounding areas differ markedly in size, climate, vegetation, and extent of human development. We tested the extent to which total species richness, native species richness, and the number of extirpations and introductions of terrestrial vertebrates were correlated with each of these factors. To do this, we used surveys of park fauna from the present and from the time of park establishment. Richness, extirpations, and introductions were all strongly related to climate. After we controlled for climate, smaller parks had higher rates of species loss than larger parks. Land-use patterns (forest cover and fragmentation, roads, etc.) within parks were strongly correlated with land use in the regions surrounding the parks, showing that parks have not been isolated from regional development. Richness and extirpations within parks were generally more strongly related to regional characteristics than to the characteristics of the parks themselves. Species richness and numbers of introduced species were higher in parks found in landscapes with greater fragmentation. Frequencies of extirpations were less clearly related to human-influenced habitat characteristics. Introductions and extinctions most often involved game species or species directly associated with human activities. There is little evidence of subtle ecological effects being responsible for species loss. Our results suggest that management should focus on direct human interventions, such as hunting, introduction of game species, and habitat fragmentation, in parks and surrounding areas.     

Isotopic evidence of distinct feeding ecologies and movement patterns in two migratory predators (yellowfin tuna and swordfish) of the western Indian Ocean

Ecologists primarily use δ¹⁵N values to estimate the trophic level of organisms, while δ¹³C, and even recently δ¹⁵N, are utilized to delineate feeding habitats. However, many factors can influence the stable isotopic composition of consumers, e.g. age, starvation or isotopic signature of primary producers. Such sources of variability make the interpretation of stable isotope data rather complex. To examine these potential sources of variability, muscle tissues of yellowfin tuna (Thunnus albacares) and swordfish (Xiphias gladius) of various body lengths were sampled between 2001 and 2004 in the western Indian Ocean during different seasons and along a latitudinal gradient (23°S to 5°N). Body length and latitude effects on δ¹⁵N and δ¹³C were investigated using linear models. Both latitude and body length significantly affect the stable isotope values of the studied species but variations were much more pronounced for δ¹⁵N. We explain the latitudinal effect by differences in nitrogen dynamics existing at the base of the food web and propagating along the food chain up to top predators. This spatial pattern suggests that yellowfin and swordfish populations exhibit a relatively unexpected resident behaviour at the temporal scale of their muscle tissue turnover. The body length effect is significant for both species but this effect is more pronounced in swordfish as a consequence of their different feeding strategies, reflecting specific physiological abilities. Swordfish adults are able to reach very deep water and have access to a larger size range of prey than yellowfin tuna. In contrast, yellowfin juveniles and adults spend most of their time in the surface waters and large yellowfin tuna continue to prey on small organisms. Consequently, nitrogen isotopic signatures of swordfish tissues are higher than those of yellowfin tuna and provide evidence for different trophic levels between these species. Thus, in contrast to δ¹³C, δ¹⁵N analyses of tropical Indian Ocean marine predators allow the investigation of complex vertical and spatial segregation, both within and between species, even in the case of highly opportunistic feeding behaviours. The linear models developed in this study allow us to make predictions of δ¹⁵N values and to correct for any body length or latitude differences in future food web studies.     

Habitat Fragmentation in Arid Zones: A Case Study of <Emphasis Type="Italic">Linaria nigricans</Emphasis> Under Land Use Changes (SE Spain)

Habitat fragmentation due to human activities is one of the most important causes of biodiversity loss. In Mediterranean areas the species have co-evolved with traditional farming, which has recently been replaced for more severe and aggressive practices. We use a methodological approach that enables the evaluation of the impact that agriculture and land use changes have for the conservation of sensitive species. As model species, we selected Linaria nigricans, a critically endangered plant from arid and semiarid ecosystems in south-eastern Spain. A chronosequence of the evolution of the suitable habitat for the species over more than 50 years has been reconstructed and several geometrical fragmentation indices have been calculated. A new index called fragmentation cadence (FC) is proposed to quantify the historical evolution of habitat fragmentation regardless of the habitat size. The application of this index has provided objective forecasting of the changes of each remnant population of L. nigricans. The results indicate that greenhouses and construction activities (mainly for tourist purposes) exert a strong impact on the populations of this endangered species. The habitat depletion showed peaks that constitute the destruction of 85% of the initial area in only 20 years for some populations of L. nigricans. According to the forecast established by the model, a rapid extinction could take place and some populations may disappear as early as the year 2030. Fragmentation-cadence analysis can help identify population units of primary concern for its conservation, by means of the adoption of improved management and regulatory measures.     

Factors affecting the detection distances of reef fish: implications for visual counts

Detection patterns of coral reef fish were assessed from the meta-analysis of distance sampling surveys performed by visual census in New Caledonia and French Polynesia, from 1986 to 1999. From approximately 100,000 observations relating to 593 species, the frequency distributions of fish detection distances perpendicular to the transect line were compared according to species characteristics and sampling conditions. The shape and extension of these detection profiles varied markedly with fish size, shyness, and crypticity, indicating strong differences of detectability across species. Detection of very small and cryptic fish decreased strongly 1 m away from the line. Conversely, sightings of shy and large species were excessively low in the first meters due to diver avoidance prior to detection. The larger the fish, the greater the fleeing distance. Distance data underscore how inconsistent detectability biases across species and sites can affect the accuracy of visual censuses when assessing coral reef fish populations.