Phylogenetic analyses of potentially free-living <Emphasis Type="Italic">Symbiodinium</Emphasis> spp. isolated from coral reef sand in Okinawa,Japan

The existence of “free-living” Symbiodinium that can form symbioses with hosts is implied by the presence of hosts that produce Symbiodinium-free gametes and expulsion and/or expelled symbiotic algae from host. However, it is still unclear if potentially symbiotic Symbiodinium are found “free-living” in the coral reef environment. Sixteen Symbiodinium strains were established from samples taken from three sampling locations of coral reef sand in Okinawa, Japan. Phylogenetic analyses of the partial large subunit ribosomal DNA (28S-rDNA) and the internal transcribed spacer of ribosomal DNA (ITS-rDNA) conclusively showed that all 16 isolates belonged to Symbiodinium clade A sensu Rowan and Powers (1991). The lack of other Symbiodinium clades besides clade A in this study may be due to other clades not being readily culturable under culture conditions used here. The new isolates could be phylogenetically divided into four groups, though no sequences were identical to previously reported Symbiodinium. Two of the four groups were closely related to symbiotic Symbiodinium clade A isolated from a variety of host species. One isolate group formed a highly supported monophyly with Symbiodinium types that have previously been characterized as “free-living”. The remaining isolate group, although within clade A, was quite divergent from other clade A Symbiodinium. These results indicate that novel diversity of free-living Symbiodinium exists in coral sand.     

Evaluation of surface runoff and road dust as sources of nitrogen using nitrate isotopic composition

Stable nitrogen and oxygen isotope ratios of nitrate (δ¹⁵N-NO₃ and δ¹⁸O-NO₃) have recently been used to identify nitrogen sources in water environments. However, there have been no investigations designed to determine nitrate isotopes in non-point sources in urban areas for evaluating the impact of surface deposits on nitrogen in surface runoff. In this study, we collected rainwater, surface runoff and surface deposits (road dust, roof dust and soil) to evaluate the nitrogen sources in surface runoff using nitrate isotopes. There were no large differences in δ¹⁵N-NO₃ among rainwater (−0.3‰ to 1.5‰), surface runoff (−2.7‰ to 0.4‰), leachates from road dust (−5.8‰ to 6.2‰) and soil (−11.5‰ to 0.6‰). In contrast, the δ¹⁸O-NO₃ in surface runoff (28.5-47.9‰) was lower than that in rainwater (62.7-78.6‰), and higher than that in leachates from road dust (6.1-27.6‰) and soil (−1.1‰ to 6.6‰). δ¹⁸O-NO₃ is a useful indicator for evaluating the NO₃-N sources in surface runoff. Using this indicator, NO₃-N from road dust was estimated to account for more than half of the NO₃-N in surface runoff. This is consistent with a result based on a comparison of their loads per unit surface between rainwater and surface runoff, which also showed that most of the nitrogen in surface runoff was derived from surface deposits.     

A GIS-based evaluation of the effect of decontamination on effective doses due to long-term external exposures in Fukushima

Despite the enormous cost of radiation decontamination, there has been almost no quantitative discussion on how much it would reduce the long-term external radiation exposure in the Evacuation Zone and Planned Evacuation Zone (restricted zone) in Fukushima. The aim of this study is to assess the effectiveness of decontamination and return options and to identify important parameters for estimating the long-term cumulated effective dose (CED) during 15, 30 and 70 year period using data on land-use, population and decontamination in the restricted zone (about 1100 km²) in Fukushima.     

Littoral Fish Communities in Lake Tanganyika: Irreplaceable Diversity Supported by Intricate Interactions among Species

The rocky littoral areas of Lake Tanganyika harbor diverse fish communities, mainly composed of cichlids. Their stability, structure, and organizing mechanism were examined at three locations by census, behavioral observations, and dietary analyses. These fish communities were stable, characterized by their persistence during a 10-year period and resilience after a perturbation. Partitioning of spawning sites among substrate spawners was evident, which might be a factor in their ability to coexist. The fish communities were consistently composed of 12 food-habit groups, but composition of species in each group differed from location to location. Among species of different food-habit groups, facultative commensalisms were prevalent. Although aggressive interactions are common among fishes of the same food-habit group, each predatory fish obtained an advantage in feeding efficiency from the different feeding behaviors of other species of the same group. This mutualism and the facultative commensalism should both increase species richness in different parts of the communities. These intricate interactions among species may be a base of stability of the fish communities. We assert that maintenance of ecological networks among species are most important for conservation of biodiversity in tropical regions.     

Diel fluctuations of mycosporine-like amino acids in shallow-water scleractinian corals

Reports of bathymetric decrease in the total mycosporine-like amino acid (MAA) concentration of benthic invertebrates suggest that light gradients may be important determinants of MAA content. With the pronounced diel light changes, distinct temporal variations in MAA concentrations might also be expected. We examined the changes in the abundance of MAA in three shallow-water scleractinian corals, Pavona divaricata, Galaxea fascicularis and Montipora digitata from Okinawa, Japan, in relation to daily cycles in solar radiation and tested whether the species have different capabilities for protection against UVR depending on their MAA composition. The results show that symbiotic algae freshly isolated from the investigated coral species do not contain MAAs and that distribution of these compounds resided only within the animal tissue. Total MAA content in the tissue of P. divaricata, G. fascicularis and M. digitata rose rapidly at midday and significantly dropped at night. The observed variations were by a factor of two and, thus, very dramatic. For all the investigated coral species, total MAA concentrations were significantly correlated with the diurnal cycle in solar radiation, during both winter and summer seasons. Seawater temperature was significantly correlated with MAA levels only in the June experiment, but represented no more than 20% of the MAA variation in all three coral species, whereas solar radiation explained 60–70% of the MAA fluctuations. This suggests that MAAs are an integral component of the hard corals biochemical defense system against high solar irradiance stress. The diurnal increase in total MAA concentrations was due to an increase in the concentration of imino-MAA species of up to 2–2.5-fold of their pre-dawn values. In contrast, the oxocarbonyl-MAA mycosporine-glycine (Myc-Gly) showed the lowest (Tukey–Kramer HSD test: P<0.05) values at midday, compared to afternoon and night hours. Analysis of diel changes in chlorophyll fluorescence and chlorophyll a content of the investigated species revealed that P. divaricata and G. fascicularis were less sensitive to the high levels of ambient irradiance compared to M. digitata. In P. divaricata and G. fascicularis, Myc-Gly, an MAA with an antioxidant function, is the most abundant MAA, contributing about 70% to the total MAA pool, whereas the major MAA factions in M. digitata were represented by oxidatively robust imino-MAAs. We speculate that MAAs furnish scleractinian corals with protection from biologically damaging ultraviolet radiation through both the direct sunscreening activity of imino-MAAs and the antioxidant properties of oxocarbonyl-MAAs and suggest that the predominance, in the host tissue, of MAA species with an antioxidant ability may render corals more tolerant to high photosynthetically active and ultraviolet radiation.Communicated by T. Ikeda, Hakodate     

Chlordane compounds residues in Weddell seals (Leptonychotesweddelli) from the Antarctic

Weddell seal samples taken from the Antarctic have been found to be contaminated with chlordane compounds. ΣChlordane ($\text{cis}\text{-chlordane}\text{+}\text{cis}\text{-nonachlor}\text{+}\text{trans}\text{-nonachlor}\text{+}\text{oxychlordane}$) was present in blubber of seals at the range of 12 - 62 ng/g fresh weight. The order of chlordane compound concentrations was $\text{trans}\text{-nonachlor}\text{>}\text{oxychlordane}\text{>}\text{cis}\text{-nonachlor}\text{>}\text{cis}\text{-chlordane}$. Relative aboundance of $\text{cis}$-chlordane in Σchlordane is higher than that in humans. A probable explanation for their occurrence in the Antarctic is an airborne transport.     

PCBs and chlorinated hydrocarbon pesticides in Antarctic atmosphere and hydrosphere

PCBs and chlorinated hydrocarbon pesticides such as DDTs and HCHs (BHCs) were measured in air, water, ice and snow samples collected around the Japanese research stations in Antarctica and adjacent oceans during December 1980 to March 1982. The atmospheric concentrations of chlorinated hydrocarbons decreased in the transport process from northern lands to Antarctica, but the compositions of PCBs, DDT compounds and HCH isomers were relatively uniform throughout this process. Regional and seasonal variations were found in aerial concentrations of these pollutants at Syowa Station and adjacent seas in Antarctica. Chlorinated hydrocarbons were also detected in snow, ice, lake water and sea water samples, in which rather high concentrations were found in snow and ice samples. This suggests that snow and ice serve as media of supply of these pollutants into Antarctic marine environment. Most interestingly, the concentrations of DDTs and higher chlorinated biphenyls were much lower in sea water under fast ice than in that from outer margin of pack ice. This indicates that the active removal of these pollutants is occurred in the sea under fast ice, and that is strongly associated with high primary productivity. It is, therefore, presumed that the concentrations of PCBs and DDTs in marine organisms living under fast ice in Antarctica could be lower than those in other oceans.     

Yield loss in conventional and natural rice farming systems

Compared to modern, conventional agriculture, alternative agricultural production systems may rely on biologically different mechanisms (syndromes) to attain similar production goals. Yield loss to rice in conventional and natural farming rice paddies in Japan was evaluated by simulated injury (leaf-clipping) and monitoring plants damaged by insect herbivores. Rice grown under natural farming practices was more tolerant of simulated injury and injury from Oulema oryzae than rice grown under conventional practices. Natural farming rice retained proportionately more tillers and had a higher proportion of mature seeds than conventionally grown rice. In conventional paddies, the simulated injury may have made the rice plants more susceptible to plant pathogens than their non-injured counterparts, resulting in higher disease attack and proportionately greater yield loss. These results suggest that, pests may affect yield loss independently in natural farming, but in conventional paddies, multiple pest injury may interact synergistically, compounding yield loss.     

Dynamics of gonadosomatic index of fish with indeterminate fecundity between subsequent egg batches: application to Japanese anchovy Engraulis japonicus under captive conditions

The gonadosomatic index (GSI) is widely used as a simple measure of reproductive capacity, but its validity has often been questioned. This study showed the inter-spawning variation in the predicted GSI of Japanese anchovy using the gravimetric oocyte packing density method. Time course sampling showed that final oocyte maturation and subsequent ovulation occurred from afternoon to evening on the day of spawning. Oocyte in vitro assay, however, suggested that the timing of the spawning could be predetermined by midnight the day before spawning. Models predicted that the GSI of a female just after spawning gradually increases until the completion of germinal vesicle breakdown, after which it dramatically rises by 24–53 % per hour within a few hours of the onset of ovulation. This indicates that the predicted GSI of a female increases by 3.5 times within about 19 h before ovulation, even if the relative batch fecundity remains constant.     

Comparison of telomere length among different life cycle stages of the jellyfish Cassiopea andromeda

The polyp (scyphistoma) of the jellyfish Cassiopea andromeda reproduces asexually repeatedly, while the medusa, the sexually reproducing stage, exhibits a relatively shorter life span. As a first step to understand the mechanism behind the differences in the life spans of the polyp and medusa stages of the jellyfish, we compared the lengths of the telomere region of one targeted chromosome between the polyp and medusa stages using a modified single telomere length assay (STELA). The double-stranded regions of the telomeres were amplified by PCR, and the average length of the PCR products was estimated by densitometry analysis of the gel smear. Chromosomes within cells of the bell region of the medusa were characterized by longer telomeres than those of polyps, asexual propagules, or other regions of the medusa. This is the first study to estimate the telomere lengths of targeted chromosomes in a cnidarian and opens a way to understand the mechanism underlying different life spans of the polyp and medusa stages.