Effect of pH and salinity on pathogenicity of Flavobacterium columnare and Myxobacterium sp. in Indian cat fish, Clarias batrachus (Linn.) and Heteropneustes fossilis (Bloch.)

Flavobacterium columnare (FC) and Myxobacterium sp. recorded persistently associated in fish hatchery and culture system of Himalayan and Sub - Himalayan regions were found to be pathogenic. The pH and salinity played a significant role on the pathogenicity of these potent pathogens in case of Clarias batrachus and Heteropneustes fossilis. LD50 value of FC was 10(4.5) CFU in both the fishes and those of Myxobacterium sp it was 10(6) CFU ml(-1) fish(-1). Fish challenged with F. columnare and Myxobacterium sp. (@ 0.2 ml fish(-1)) individually consisting 10(5-6) cfu ml(-1) exhibited explicit symptoms of columnaris disease and marked with ulceration and saddle back lesion on the dorsal side of body. Maximum reisolation of inoculated bacteria was recorded at pH 7.0 and 7.5 and at 0.0-0.5 (F. columnare) and 0.0-1.0% (Myxobacterium sp.) salinity. Foregoing results elucidated that F. columnare was more sensitive to salinity in comparison to Myxobacterium sp. and their pathogenicity significantly (p<0.05) depends on the salinity and pH that might be one of the physical factors to control their proliferation.     

Groundwater resource assessment, categories, and typologies: case study, Andhra Pradesh, India

In India, groundwater assessment units are classified as overexploited areas, critical areas, semi-critical, or safe areas based on the stage of groundwater development and long-term water level trends. Intuitively, in the safe units, wells are expected to function and have good yields. Besides, in the safe units, new wells are expected to be successful. Conversely, the expectation of a successful well or wells with good yields is much lesser in the overexploited units. However, when these expectations are not met in the field, doubts are raised about the quality of assessment and its usefulness, and there is outright distrust on the agencies assessing groundwater resource by the common man as well as on the planners, administrators, and the politicians. Therefore, there is a need to present the results in a way that does not create confusion. One of the methods is to combine the assessment results with aquifer characters using geographic information system (GIS); when this is done, a whole set of newer classes emerge, which can be mapped. These classes are termed as groundwater typologies in this study. Each typology has some characteristics or traits in common, which include basic aquifer character as well as the stage of groundwater development. Thus, a class may be safe, but if the aquifer is poor, then it is separated from a class that is safe and where the aquifer is good and so on. In Andhra Pradesh, which is taken as the case study for this purpose, eight main typologies emerged, and two of these main typologies were further divided into four subtypologies each. This new way of understanding the pattern of groundwater abstraction (using GIS) has a better visual impact. Groundwater typologies are found to be much more rational and useful in developing management strategies, rather than simple listing as overexploited areas, critical areas, semi-critical areas, and safe areas as is commonly done. The typologies so delineated indicate on the map (or table) that balanced usable groundwater is in between 5 and 6 bcm/a as against the estimated balance of 20.5 bcm/a, and it is largely in poor hard rock type of aquifers, which occupy about a third of the area of the state.     

Spatial and seasonal distribution of nitrate-N in groundwater beneath the rice�Cwheat cropping system of India: a geospatial analysis

Increased use of nitrogenous fertilizers in the intensively cultivated rice (Oryza sativa)?Cwheat (Triticum aestivum) cropping system (covers a 13.5-ha m area in South Asia) has led to the concentration of nitrates (NO₃-N) in the groundwater (GW) in Haryana State of India. Six districts from the freshwater zone were selected to identify factors affecting NO₃-N enrichment in GW. Water and soil samples were collected from 1,580 locations and analyzed for their chemical properties. About 3% (26,796, and 10,588 ha) of the area was estimated to be under moderately high (7.5?C10 mg l^???1) and high (>10 mg l^???1) risk categories, respectively. The results revealed that NO₃-N was 10?C50% higher during the pre-monsoon season than in the monsoon season. Nitrate-N decreased with the increase in aquifer depth (r ²?=?0.99). Spatial and proximity analyses using ArcGIS (9.2) revealed that (1) clay material in surface and sub-surface texture restricts N leaching, (2) piedmont and rolling plains act as an N sink, and (3) perennial rivers bring a dilution effect whereas seasonal rivers provide favorable conditions for NO₃ ^? enrichment. The study concludes that chemical N fertilizers applied in agro-ecosystems are not the sole factor determining the NO₃ in groundwater; rather, it is an integrated process governed by several other factors including physical and chemical properties of soils, proximity and type of river, and geomorphologic and geographical aspects. Therefore, future studies should adopt larger area (at least watershed scale) to understand the mechanistic pathways of NO₃ enrichment in groundwater and interactive role of the natural drainage system and surrounding physical features. In addition, the study also presents a conceptual framework to describe the process of nitrate formation and leaching in piedmont plains and its transportation to the mid-plain zone.     

Evaporating liquid flow in a channel (An integral model based on shallow water flow approximation)

Liquefied Natural Gas (LNG) storage facilities generally include channels to convey potential spills of the liquid to an impoundment. There is increasing concern that dispersion of vapors generated by flow of LNG in a channel may lead to higher than limit vapor concentrations for safety at site boundary from channels that may be close to the dike walls. This issue is of recent concern to regulatory agencies, because the calculation of vapor hazard distance(s) from LNG flow in a channel is not required under existing LNG facility siting standards or regulations.An important parameter that directly affects the calculated LNG vapor dispersion distance is the source strength (i.e., the rate of vaporization of LNG flow from the wetted channel surfaces, as a function of spatial position and time). In this paper a model is presented which considers the variation of the depth of the flowing LNG with spatial location and time, and calculates the spatial and temporal dependence of the mass rate of vapor generation. Self similar profiles for the spatial variation of the thermal boundary layer in the liquid wetted wall and liquid depth variation are assumed. The variation with time of the location of the liquid spread front and the evaporation rate are calculated for the case of a constant LNG spill rate into a rectangular channel. The effects of two different channel slopes are evaluated. Details of the results and their impact on dispersion distances are discussed.     

Chemometrics in assessment of seasonal variation of water quality in fresh water systems

The spatial and temporal distribution of polycyclic aromatic hydrocarbons (PAHs) was investigated in Gomti River, a major tributary of the Ganga river (India). A total of 96 samples (water and sediments) were collected from eight different sites over a period of 2 years and analysed for 16 PAHs. The total concentrations of 16 PAHs in water and bed sediments ranged between 0.06 and 84.21 ??g/L (average (n?=?48), 10.33 ± 19.94 ??g/L) and 5.24?C3,722.87 ng/g dw [average (n?=?48): 697.25 ± 1,005.23 ng/g dw], respectively. In water, two- and three-ring PAHs and, in sediments, the three- and four-ring PAHs were the dominant species. The ratios of anthracene (An)/An + phenenthrene and fluoranthene (Fla)/Fla + pyrene were calculated to evaluate the possible sources of PAHs. These ratios reflected a pattern of pyrolytic input as a major source of PAHs in the river. Principal component analysis, further, separated the PAHs sources in the river sediments, suggesting that both the pyrolytic and petrogenic sources are contributing to the PAHs burden. The threat to biota of the river due to PAHs contamination was assessed using effect range low and effect range median values, and the results suggested that sediment at some occasions may pose biological impairment.     

Translating habitat class to land cover to map area of habitat of terrestrial vertebrates

Area of habitat (AOH) is defined as the “habitat available to a species, that is, habitat within its range” and is calculated by subtracting areas of unsuitable land cover and elevation from the range. The International Union for the Conservation of Nature (IUCN) Habitats Classification Scheme provides information on species habitat associations, and typically unvalidated expert opinion is used to match habitat to land-cover classes, which generates a source of uncertainty in AOH maps. We developed a data-driven method to translate IUCN habitat classes to land cover based on point locality data for 6986 species of terrestrial mammals, birds, amphibians, and reptiles. We extracted the land-cover class at each point locality and matched it to the IUCN habitat class or classes assigned to each species occurring there. Then, we modeled each land-cover class as a function of IUCN habitat with (SSG, using) logistic regression models. The resulting odds ratios were used to assess the strength of the association between each habitat and land-cover class. We then compared the performance of our data-driven model with those from a published translation table based on expert knowledge. We calculated the association between habitat classes and land-cover classes as a continuous variable, but to map AOH as binary presence or absence, it was necessary to apply a threshold of association. This threshold can be chosen by the user according to the required balance between omission and commission errors. Some habitats (e.g., forest and desert) were assigned to land-cover classes with more confidence than others (e.g., wetlands and artificial). The data-driven translation model and expert knowledge performed equally well, but the model provided greater standardization, objectivity, and repeatability. Furthermore, our approach allowed greater flexibility in the use of the results and uncertainty to be quantified. Our model can be modified for regional examinations and different taxonomic groups.     

Nitrate contamination in water resources,human health risks and its remediation through adsorption: a focused review

The level of nitrate in water has been increasing considerably all around the world due to vast application of inorganic nitrogen fertiliser and animal manure. Because of nitrate’s high solubility in water, human beings are getting exposed to it mainly through various routes including water, food etc. Various regulations have been set for nitrate (45–50 mgNO₃^?/L) in drinking water to protect health of the infants from the methemoglobinemia, birth defects, thyroid disease, risk of specific cancers, i.e. colorectal, breast and bladder cancer caused due to nitrate poisoning. Different methods like ion exchange, adsorption, biological denitrification etc. have the ability to eliminate the nitrate from the aqueous medium. However, adsorption process got preference over the other approaches because of its simple design and satisfactory results especially with surface modified adsorbents or with mineral-based adsorbents. Different types of adsorbents have been used for this purpose; however, adsorbents derived from the biomass wastes have great adsorption capacities for nitrate such as tea waste-based adsorbents (136.43 mg/g), carbon nanotube (142.86 mg/g), chitosan beads (104 mg/g) and cetyltrimethylammonium bromide modified rice husk (278 mg/g). Therefore, a thorough literature survey has been carried out to formulate this review paper to understand various sources of nitrate pollution, route of exposure to the human beings, ill effects along with discussing the key developments as well as the new advancements reported in procuring low-cost efficient adsorbents for water purification.

     

Active biomonitoring with wet and dry moss: a case study in an urban area

Active biomonitoring of the air quality in Belgrade, Serbia, was performed using the moss Sphagnum girgensohnii. Moss bags were exposed in parallel with and without irrigation for 3 and 6 months, respectively, at three different sites. Twenty-nine elements were determined in the exposed moss samples by INAA. For all exposure periods, higher uptake in the irrigated moss bags was evident for Al, Cr, Fe, Zn and Sr. Elements such as Cl, K, Rb and Cs were depleted in the moss tissue during the time of exposure. For most of the elements the accumulation after 6 months exceeded that observed after 3 months.     

Assimilation of conventional and satellite wind observations in a mesoscale atmospheric model for studying atmospheric dispersion

A mesoscale atmospheric model PSU/NCAR MM5 is used to provide operational weather forecasts for a nuclear emergency response decision support system on the southeast coast of India. In this study the performance of the MM5 model with assimilation of conventional surface and upper-air observations along with satellite derived 2-d surface wind data from QuickSCAT sources is examined. Two numerical experiments with MM5 are conducted: one with static initialization using NCEP FNL data and second with dynamic initialization by assimilation of observations using four dimensional data assimilation (FDDA) analysis nudging for a pre-forecast period of 12 h. Dispersion simulations are conducted for a hypothetical source at Kalpakkam location with the HYSPLIT Lagrangian particle model using simulated wind field from the above experiments. The present paper brings out the differences in the atmospheric model predictions and the differences in dispersion model results from control and assimilation runs. An improvement is noted in the atmospheric fields from the assimilation experiment which has led to significant alteration in the trajectory positions, plume orientation and its distribution pattern. Sensitivity tests using different PBL and surface parameterizations indicated the simple first order closure schemes (Blackadar, MRF) coupled with the simple soil model have given better results for various atmospheric fields. The study illustrates the impact of the assimilation of the scatterometer wind and automated weather stations (AWS) observations on the meteorological model predictions and the dispersion results.     

2-(4-Chlorophenyl)benzo-1,4-quinone induced ROS-signaling inhibits proliferation in human non-malignant prostate epithelial cells

Polychlorinated biphenyls (PCBs) and their metabolites are environmental chemical contaminants which can produce reactive oxygen species (ROS) by auto-oxidation of di-hydroxy PCBs as well as the reduction of quinones and redox-cycling. We investigate the hypothesis that 2-(4-chlorophenyl)benzo-1,4-quinone (4-Cl-BQ), a metabolite of 4-chlorobiphenyl (PCB3), induced ROS-signaling inhibits cellular proliferation. Monolayer cultures of exponentially growing asynchronous human non-malignant prostate epithelial cells (RWPE-1) were incubated with 0–6 μM of 4-Cl-BQ and harvested at the end of 72 h of incubation to assess antioxidant enzyme expression, cellular ROS levels, cell growth, and cell cycle phase distributions. 4-Cl-BQ decreased manganese superoxide dismutase (MnSOD) activity, protein, and mRNA levels. 4-Cl-BQ treatment increased dihydroethidium (DHE) fluorescence, which was suppressed in cells pretreated with polyethylene glycol conjugated superoxide dismutase (PEG-SOD). The increase in ROS levels was associated with a decrease in cell growth, and an increase in the percentage of S-phase cells. These effects were suppressed in cells pretreated with PEG-SOD. 4-Cl-BQ treatment did not change the protein levels of phosphorylated H2AX at the end of 72 h of incubation, suggesting that the inhibition in cell growth and accumulation of cells in S-phase at the end of the treatments were probably not due to 4-Cl-BQ induced DNA double strand break. These results demonstrate that MnSOD activity and ROS-signaling perturb proliferation in 4-Cl-BQ treated in vitro cultures of human prostate cells.