Microbes do not follow the elevational diversity patterns of plants and animals

The elevational gradient in plant and animal diversity is one of the most widely documented patterns in ecology and, although no consensus explanation exists, many hypotheses have been proposed over the past century to explain these patterns. Historically, research on elevational diversity gradients has focused almost exclusively on plant and animal taxa. As a result, we do not know whether microbes exhibit elevational gradients in diversity that parallel those observed for macroscopic taxa. This represents a key knowledge gap in ecology, especially given the ubiquity, abundance, and functional importance of microbes. Here we show that, across a montane elevational gradient in eastern Peru, bacteria living in three distinct habitats (organic soil, mineral soil, and leaf surfaces) exhibit no significant elevational gradient in diversity (r2<0.17, P>0.1 in all cases), in direct contrast to the significant diversity changes observed for plant and animal taxa across the same montane gradient (r2>0.75, P<0.001 in all cases). This finding suggests that the biogeographical patterns exhibited by bacteria are fundamentally different from those of plants and animals, highlighting the need for the development of more inclusive concepts and theories in biogeography to explain these disparities.     

Coral cavity sponges depend on reef-derived food resources: stable isotope and fatty acid constraints

The diet of cavity sponges on the narrow fringing reefs of Curaçao, Caribbean was studied. The origin and resources of the bulk food of these sponges, i.e., dissolved organic matter (DOM), were identified using stable carbon and nitrogen isotopes and fatty acid biomarkers. We found that phytoplankton and its derived DOM from the adjacent open sea and from reef overlying water is not the main source of food for most of the sponges examined nor is bacterioplankton. Interestingly, dual stable isotope signatures (δ¹³C_org, δ¹⁵N_org) and fatty acid biomarkers appoint coral mucus and organic matter derived from crustose coralline algae (CCA) as probable food sources for encrusting sponges. Mucus-derived DOM may contribute up to 66% to the diet of examined sponges based on results of dual isotope mixing model analysis. The contribution of CCA (as purported representative for benthic algae) was smaller with values up to 31%. Together, mucus- and CCA-derived substrates contributed for 48–73% to the diet of sponges. The presence of the exogenous fatty acid 20:4ω6 in sponges, which is abundant in coral mucus of Madracis mirabilis and in CCA, highlights these reef-derived resources as sources of nutrition for DOM feeding cavity sponges. The relatively high concentrations of exogenous 20:4ω6 in all sponges examined supports our hypothesis that the bulk of the food of the cavity sponge community is reef-derived. Our results imply that cavity sponges play an important role in conserving food and energy produced within the reef.     

The effects of regional angling effort, angler behavior, and harvesting efficiency on landscape patterns of overfishing

We used a coupled social-ecological model to study the landscape-scale patterns emerging from a mobile population of anglers exploiting a spatially structured walleye (Sander vitreus) fishery. We systematically examined how variations in angler behaviors (i.e., relative importance of walleye catch rate in guiding fishing site choices), harvesting efficiency (as implied by varying degrees of inverse density-dependent catchability of walleye), and angler population size affected the depletion of walleye stocks across 157 lakes located near Thunder Bay (Ontario, Canada). Walleye production biology was calibrated using lake-specific morphometric and edaphic features, and angler fishing site choices were modeled using an empirically grounded multi-attribute utility function. We found support for the hypothesis of sequential collapses of walleye stocks across the landscape in inverse proportionality of travel cost from the urban residence of anglers. This pattern was less pronounced when the regional angler population was low, density-dependent catchability was absent or low, and angler choices of lakes in the landscape were strongly determined by catch rather than non-catch-related attributes. Thus, our study revealed a systematic pattern of high catch importance reducing overfishing potential at low and aggravating overfishing potential at high angler population sizes. The analyses also suggested that density-dependent catchability might have more serious consequences for regional overfishing states than variations in angler behavior. We found little support for the hypotheses of systematic overexploitation of the most productive walleye stocks and homogenized catch-related qualities among lakes sharing similar access costs to anglers. Therefore, one should not expect anglers to systematically exploit the most productive fisheries or to equalize catch rates among lakes through their mobility and other behaviors. This study underscores that understanding landscape overfishing dynamics involves a careful appreciation of angler population size and how it interacts with the attributes that drive angler behaviors and depensatory mechanisms such as inverse density-dependent catchability. Only when all of these ingredients are considered and understood can one derive reasonably predictable patterns of overfishing in the landscape. These patterns range from self-regulating systems with low levels of regional fishing pressure to sequential collapse of walleye fisheries from the origin of angling effort.     

Prenatal diagnosis in a family with X-linked hydrocephalus

The neural cell adhesion molecule L1 is a transmembrane glycoprotein belonging to the immunoglobulin superfamily of cell adhesion molecules (CAMs). Its expression is essential during embryonic development of the nervous system and it is involved in cognitive function and memory. Mutations in the L1CAM gene are responsible for four related L1 disorders; X-linked hydrocephalus/HSAS (H ydrocephalus as a result of S tenosis of the A queduct of S ylvius), MASA (M ental retardation, A phasia, S huffling gait, and A dducted thumbs) syndrome, X-linked complicated spastic paraplegia type I (SPG1) and X-linked A genesis of the C orpus C allosum (ACC). These four disorders represent a clinical spectrum that varies both between and within families. The main clinical features of this spectrum are C orpus callosum hypoplasia, mental R etardation, A dducted thumbs, S pastic paraplegia and H ydrocephalus (CRASH syndrome). Since there is no biochemically assayed disease marker, molecular analysis of the L1CAM gene is the only means of confirming a clinical diagnosis. Most L1CAM mutations reported to date are point mutations (missense, nonsense, splice site) and only a few patients with larger rearrangements have been documented. We have characterised a rare intragenic deletion of the L1CAM gene in a sample of DNA extracted from a chorionic villus biopsy (CVB) performed at 12 weeks' gestation. Copyright © 2005 John Wiley & Sons, Ltd.     

Diagnosing Units of Conservation Management

Species-oriented conservation programs attempt to analyze and maintain intra-specific variation in order to maximally preserve biological diversity. The "evolutionarily significant unit" has become an operational term for a group of organisms that should be the minimial unit for conservation management. No generally accepted definition for this term exists that would be the basis for the evaluation of these units in practical conservation situations. Currently, taxonomic decisions in species conservation are mostly based on the biological species concept. But the universal application of criteria of reproductive isolation or phenetic similarity to delimit conservation units is problematical. We favor a definition for evolutionarily significant units based on patterns of variation. In the theoretical framework of the phylogenetic species concept, conservation units are delimited by characters that diagnose clusters of individuals or populations to the exclusion of other such clusters. Characters are used for cladistic analysis to infer hypotheses of the phylogenetic relationships of individuals, and differentiated populations are diagnosed using population aggregation analysis. Characters can be based on genetic, morphological, ecological, or behavioral information, provided they are inferred to be heritable. The use of cladistics and population aggregation analysis has the potential to make the evaluation of evoluntionarily significant units objective and testable, an important consideration in politically controversial cases. Our cladistic approach is demonstrated by the evaluation of potential conservation units in the endangered tiger beetles Cicindela dorsalis and C. puritana .     

A framework for habitat monitoring and climate change modelling: construction and validation of the Environmental Stratification of Estonia

Environmental stratifications provide the framework for efficient surveillance and monitoring of biodiversity and ecological resources, as well as modelling exercises. An obstacle for agricultural landscape monitoring in Estonia has been the lack of a framework for the objective selection of monitoring sites. This paper describes the construction and testing of the Environmental Stratification of Estonia (ESE). Principal components analysis was used to select the variables that capture the most amount of variation. Seven climate variables and topography were selected and subsequently subjected to the ISODATA clustering routine in order to produce relatively homogeneous environmental strata. The ESE contains eight strata, which have been described in terms of soil, land cover and climatic parameters. In order to assess the reliability of the stratification procedure for the selection of monitoring sites, the ESE was compared with the previous map of Landscape Regions of Estonia and correlated with five environmental data sets. All correlations were significant. The stratification has therefore already been used to extend the current series of samples in agricultural landscapes into a more statistically robust series of monitoring sites. The potential for applying climate change scenarios to assess the shifts in the strata and associated ecological impacts is also examined.     

Spatio-temporal patterns in the diversity of demersal fish communities off the south coast of South Africa

The diversity of ecological communities has been the focus of many studies. Because biodiversity provides several indicators used in an Ecosystem Approach to Fisheries (EAF) to track changes in fish communities, we investigated the spatial and temporal patterns in the diversity of some demersal fish communities subjected to varying fishing pressure. Depth and catch rate were the most important predictors in explaining changes in diversity followed by longitude and survey year. Diversity, as measured by the various indices except for taxonomic distinctness (∆*), initially declined with increasing depth to about a depth of 80 m, then increased to about 150 m after which it declined. Taxonomic distinctness index (∆*) showed an increase in the taxonomic heterogeneity of the demersal community below the 300-m isobath. Diversity remained relatively constant with increase in longitude to around 24°E (which has the lowest diversity) after which it increased. The assessment of the temporal trend in diversity indicates that survey year has a significant effect on all diversity indices except for ∆*. Diversity increased and dominance declined with time. This may be result of a decline in the abundance of dominant species or an increase in the abundance less dominant species, or a combination of both effects. Multivariate analysis of the set of diversity indices showed three groups of indices: those reflecting species richness (S, Margalef’s d), those measuring mainly taxonomic relatedness (∆*), and those balancing the richness and evenness components of diversity (J′, H′, λ, ∆, Hill’s N1, and Hill’s N2). The relationship between evenness, catch rate, and size was also investigated. Size classes with highest evenness were found to have lowest catch rate and vice versa. This highlights the need to consider the size and trophic level of species when linking diversity to the functioning of ecosystems.     

The ecological footprint from a systems perspective of sustainability

Summary

The Ecological Footprint (EF) is a method for estimating the biologically productive area necessary to support current consumption patterns, given prevailing technical and economic processes. By comparing human impact with the planet's limited bioproductive area. this method tests a basic ecological condition for sustainability. The ecological footprint has gained popularity for its pedagogical strength as it expresses the results of its analysis in spatial units that can easily be communicated. Many EF estimates have been performed on a global, national and sulrnationallevel. In this paper. we review the method and critically assess it from a sustainability perspective based on first order principles. We examine: ? Which aspects of sustainability are already covered by existing EF assessments;

? Which further aspects ofsustainability could be made accountable through the EF (such as areas needed to assimilate waste streams that are not yet accounted for in present assessments); and

? Those aspects ofsustainability that cannot be accountable through the EF. Thereby needing complimentary auditing tools.

Since the EF is a measure of renewable biocapacity, we argue that some dimensions of ecological sustainability should not be included in the EF. These include human activities that should be phased out to obtain sustainability, such as emissions of persistent compounds foreign to nature and qualitative aspects that represent secondary uses of ecological areas and do not, therefore, occupy a clearly identifiable additional ecological space. We also conclude that the EF is useful for documenting the overall human use or abuse of the potentially renewable functions and services of nature. Particularly, by aggregating in a consistentway a varity of human impacts, it can effectively identify the scale of the human economy by companson with the size of the biosphere.     

A compilation of field surveys on gaseous elemental mercury (GEM) from contrasting environmental settings in Europe,South America,South Africa and China: separating fads from facts

Mercury is transported globally in the atmosphere mostly in gaseous elemental form (GEM, \( {\text{Hg}}_{\text{gas}}^{0} \) ), but still few worldwide studies taking into account different and contrasted environmental settings are available in a single publication. This work presents and discusses data from Argentina, Bolivia, Bosnia and Herzegovina, Brazil, Chile, China, Croatia, Finland, Italy, Russia, South Africa, Spain, Slovenia and Venezuela. We classified the information in four groups: (1) mining districts where this contaminant poses or has posed a risk for human populations and/or ecosystems; (2) cities, where the concentration of atmospheric mercury could be higher than normal due to the burning of fossil fuels and industrial activities; (3) areas with natural emissions from volcanoes; and (4) pristine areas where no anthropogenic influence was apparent. All the surveys were performed using portable LUMEX RA-915 series atomic absorption spectrometers. The results for cities fall within a low GEM concentration range that rarely exceeds 30 ng m^?3, that is, 6.6 times lower than the restrictive ATSDR threshold (200 ng m^?3) for chronic exposure to this pollutant. We also observed this behavior in the former mercury mining districts, where few data were above 200 ng m^?3. We noted that high concentrations of GEM are localized phenomena that fade away in short distances. However, this does not imply that they do not pose a risk for those working in close proximity to the source. This is the case of the artisanal gold miners that heat the Au–Hg amalgam to vaporize mercury. In this respect, while GEM can be truly regarded as a hazard, because of possible physical–chemical transformations into other species, it is only under these localized conditions, implying exposure to high GEM concentrations, which it becomes a direct risk for humans.