Gene-TEQ--a standardized comparative assessment of effects in the comet assay using genotoxicity equivalents

Existing methods for the comparison of genotoxic effects in the comet assay bear considerable disadvantages such as the problem to link information about concentration dependence and severity of effects. Moreover, given the lack of standardized protocols and the use of various standards, it may be extremely difficult to compare different studies. In order to provide a method for standardized comparative assessment of genotoxic effects, the concept of genotoxicity equivalents (Gene-TEQ) was developed. As potential reference compounds for genotoxic effects, three directly acting (N-methyl-N'-nitro-N-nitrosoguanidine (MNNG), methyl-methanesulfonate, and N-methyl-N-nitrosourea) and three indirectly acting (cyclophosphamide, dimethylnitrosamine, and 4-nitroquinoline-oxide) genotoxic substances were compared with respect to their cytotoxic (neutral red) and genotoxic (comet assay) concentration-response profiles in the permanent fish cell line RTL-W1. For further comparison, two sediment extracts from the upper Danube River were investigated as environmental samples. Based on the results of cytotoxicity and genotoxicity testing, MNNG was selected as the reference compound. At several exposure levels and durations, genotoxic effects of both the other pure substances and the environmental samples were calculated as percentages of the maximum MNNG effect and related to the absolute MNNG effect (EC values). Thus, genotoxicity equivalent factors (Gene-TEQs) relative to MNNG could be calculated. Gene-TEQs can easily be applied to pure substances, mixtures and field samples to provide information about their toxicity relative to the reference compound. Furthermore, the Gene-TEQ concept allows a direct comparison of environmental samples from different laboratories.     

A Framework for Comprehensive,Integrated, Watershed Monitoring in New York City

The International Life SciencesInstitute (ILSI) Risk Science Institute (RSI) convenedan expert panel of scientists to developrecommendations for a comprehensive monitoring programfor the Croton and Catskill/Delaware watersheds, whichprovide drinking water to New York City's residents. This effort was conducted as part of efforts topreserve and enhance the quality of New York City'sreservoir system through a watershed protectionprogram. The panel developed recommendations for astrategic framework on which to construct a monitoringprogram. As part of this activity, the paneldetermined whether existing monitoring activities weredeficient and, where activities were deficient, thepanel developed recommendations for additionalinformation that should be collected.The panel recommended the development and use of anintegrated approach to watershed monitoring, whichdraws on modeling, risk-based planning and analysis,statistical sampling and design, and basic compliancemonitoring. The approach should be designed toprovide an assessment of natural and anthropogenicsources of stress to the system as well as anassessment of water quality trends in response tostresses acting in concert, both over the long termand over the five-year New York City Memorandum ofAgreement (MOA) assessment time frame. It should alsoprovide an assessment of the human health andenvironmental risks posed by a variety of stressors,and the impact of management actions implemented toameliorate stressors.     

Air quality and deposition of trace elements in Didouche Mourad, Algeria

Total suspended particulate matter and deposition fluxes of particles were investigated in the town of Didouche Mourad which is located 13 km north of Constantine. Samples of air particulate matter were collected at one site located in the heart of the town and situated 3 km north of a cement plant. Samples were collected from 2 November 2002 to 28 April 2003 every 3 days using a high volume air sampler. Sampling intervals were 24 h in all cases. During the same period, samples of dust fallout were collected at the same site. Samples were collected at 30-day intervals. Lead, chromium, manganese, nickel, copper, cobalt and cadmium deposition fluxes were measured and both the soluble and insoluble fractions were determined. Furthermore, the information gathered by this study was correlated with the corresponding hourly weather data provided by a weather station installed at the study station. The possible sources for dust and trace metals were analyzed by comparing average contributions of wind aspects to the concentrations and depositions of mass and chemical species with the average frequencies of wind direction. The mean concentration was 300 μg/m³. The average dust deposition rate through the period of study was 221 mg/(m².day). Results indicate that anthropogenic sources contribute greatly to trace elements. An exposure assessment to the heavy metals taking into account the inhalation route and soil dust ingestion was carried out and allowed direct comparison of trace metal intakes via these routes.     

Concentration of heavy metals in Karanja reservoir, Bidar district, Karnataka, India

In this study, some heavy metals concentrations (Zn, Pb, Fe, Mn, Cu, Ni) and other physico-chemical parameters were studied during October 2001 to September 2003 in Karanja reservoir, Bidar district. Water quality parameters were collected monthly basis whereas heavy metals were analyzed by Atomic Adsorption Spectrometer (AAS). Heavy metals have shown within the permissible limits, except Fe and Ni were recorded higher values in southwest monsoon, where as Mn has showed higher concentration in northeast monsoon in and summer. All other physico-chemical parameters are with in the permissible limit. Water is moderately hard and reservoir is productive.     

Inexact Fuzzy-Stochastic Programming for Water Resources Management Under Multiple Uncertainties

In this study, an interval-parameter fuzzy-stochastic two-stage programming (IFSTP) approach is developed for irrigation planning within an agriculture system under multiple uncertainties. A concept of the distribution with fuzzy-interval probability (DFIP) is defined to address multiple uncertainties expressed as integration of intervals, fuzzy sets, and probability distributions. IFSTP integrates the interval programming, two-stage stochastic programming, and fuzzy-stochastic programming within a general optimization framework. IFSTP incorporates the pre-regulated water resources management policies directly into its optimization process to analyze various policy scenarios; each scenario has different economic penalty when the promised amounts are not delivered. IFSTP is applied to an irrigation planning in a water resources management system. Solutions from IFSTP provide desired water allocation patterns, which maximize both the system’s benefits and feasibility. The results indicate that reasonable solutions are generated for objective function values and decision variables; thus, a number of decision alternatives can be generated under different levels of stream flows.     

Heavy metals partitioning in sediments of the Kabini River in South India

Cu, Cr, Fe, Mn, Ni, Pb, and Zn in the sediments of the Kabini River, Karnataka, India was studied to determine the association of metal with various geochemical phases by sequential extraction. The variations of heavy metal concentration depend on the lithology of the river basin and partly on anthropogenic activities. The Kabini River sediments are dominated by Sargur supracrustals with amphibolites, gneisses, carbonates, and ultrabasic rocks weathering into gneissic and serpentine soils carrying a natural load of cationic heavy metals. The source of heavy metals in the Kabini riverbed sediments is normally envisaged as additional inputs from anthropogenic over and above natural and lithogenic sources. Geochemical study indicates the metals under study were present mostly in the least mobilizable fraction in the overlying water and it is concluded that heavy metals in these sediments are to a great extent derived from multisource anthropogenic inputs besides geochemical background contributions The results show that lead and chromium have higher potential for mobilization from the sediment due to higher concentration at the exchangeable ion and sulfide ion bounded, also Cu and Pb have the greatest percentage of carbonate fraction, it means that the study area received inputs from urban and industrial effluents. Association of the Fe with organic matter fraction can be explained by the high affinity of these elements for the humic substances. Further, Zn and Ni reveal a significant enrichment in sediment and it is due to release of industrial wastewater into the river. These trace metals are possible contaminants to enter into aquatic and food chain.     

Atmospheric influences on water quality: a simulation of nutrient loading for the Pearl River Basin, USA

Knowledge of water quality conditions is essential in assessing the health of riverine ecosystems. The goal of this study is to determine the degree to which water quality variables are related to precipitation and air temperature conditions for a segment of the Pearl River Basin near Bogalusa, LA, USA. The AQUATOX ecological fate simulation model is used to estimate daily total nitrogen, total phosphorus, and dissolved oxygen concentrations over a 2-year period. Daily modeled output for each variable was calibrated against reliably measured data to assess the accuracy. Observed data were plotted against simulated data for controlled and perturbed models for validation, and stepwise multiple regression analysis was used to quantify the relationships between the water quality and meteorological variables. Results suggest that daily dissolved oxygen is significantly negatively correlated to concurrent daily mean air temperature with a total explained variance of 0.679 (p?<?0.01), and monthly dissolved oxygen is significantly negatively correlated to monthly mean air temperature with a total explained variance of 0.567 (p?<?0.01). Total mean monthly phosphorus concentration is significantly positively related to the previous month's precipitation with a total explained variance of 0.302 (p?<?0.01). These relationships suggest that atmospheric conditions have a strong influence on water quality in the Pearl Basin. Therefore, environmental planners should expect that future climatic changes are likely to alter water quality.     

Assessment of potential health risk for inhabitants living near a former lead smelter. Part 1: metal concentrations in soils, agricultural crops, and homegrown vegetables

Soil contamination by metals engenders important environmental and health problems in northern France where a smelter (Metaleurop Nord) was in activity for more than a century. This study aims to look at the long-term effects of the smelter after its closedown by combining data on the degree of soil contamination and the quality of the crops grown (agricultural crops and homegrown vegetables) in these soils for a better assessment of the local population’s exposure to Cd, Pb, and Zn. Seven years after the Metaleurop Nord closedown, (1) the agricultural and urban topsoils were strongly contaminated by Cd, Pb, and Zn; (2) the kitchen garden topsoils were even more polluted than the agricultural soils, with great variability in metal concentrations within the gardens studied; (3) a high proportion of the agricultural crops for foodstuffs did not conform with the European legislation; (4) for feedstuffs, most samples did not exceed the Cd and Pb legislation limits, indicating that feedstuffs may be an opportunity for most agricultural produce; and (5) a high proportion of the vegetables produced in the kitchen gardens did not conform with the European foodstuff legislation. The high contamination level of the soils studied continues to be a risk for the environment and the population’s health. A further investigation (part 2) assesses the associated potential health risk for local inhabitants through consumption of homegrown vegetables and ingestion of soil particles by estimating the site-specific human health assessment criteria for Cd and Pb.     

Automated riverine landscape characterization: GIS-based tools for watershed-scale research, assessment, and management

River systems consist of hydrogeomorphic patches (HPs) that emerge at multiple spatiotemporal scales. Functional process zones (FPZs) are HPs that exist at the river valley scale and are important strata for framing whole-watershed research questions and management plans. Hierarchical classification procedures aid in HP identification by grouping sections of river based on their hydrogeomorphic character; however, collecting data required for such procedures with field-based methods is often impractical. We developed a set of GIS-based tools that facilitate rapid, low cost riverine landscape characterization and FPZ classification. Our tools, termed RESonate, consist of a custom toolbox designed for ESRI ArcGIS®. RESonate automatically extracts 13 hydrogeomorphic variables from readily available geospatial datasets and datasets derived from modeling procedures. An advanced 2D flood model, FLDPLN, designed for MATLAB® is used to determine valley morphology by systematically flooding river networks. When used in conjunction with other modeling procedures, RESonate and FLDPLN can assess the character of large river networks quickly and at very low costs. Here we describe tool and model functions in addition to their benefits, limitations, and applications.     

Accuracy and uncertainty assessment on geostatistical simulation of soil salinity in a coastal farmland using auxiliary variable

Understanding the spatial soil salinity aids farmers and researchers in identifying areas in the field where special management practices are required. Apparent electrical conductivity measured by electromagnetic induction instrument in a fairly quick manner has been widely used to estimate spatial soil salinity. However, methods used for this purpose are mostly a series of interpolation algorithms. In this study, sequential Gaussian simulation (SGS) and sequential Gaussian co-simulation (SGCS) algorithms were applied for assessing the prediction accuracy and uncertainty of soil salinity with apparent electrical conductivity as auxiliary variable. Results showed that the spatial patterns of soil salinity generated by SGS and SGCS algorithms showed consistency with the measured values. The profile distribution of soil salinity was characterized by increasing with depth with medium salinization (EC_e 4–8 dS/m) as the predominant salinization class. SGCS algorithm privileged SGS algorithm with smaller root mean square error according to the generated realizations. In addition, SGCS algorithm had larger proportions of true values falling within probability intervals and narrower range of probability intervals than SGS algorithm. We concluded that SGCS algorithm had better performance in modeling local uncertainty and propagating spatial uncertainty. The inclusion of auxiliary variable contributed to prediction capability and uncertainty modeling when using densely auxiliary variable as the covariate to predict the sparse target variable.