Determining the community structure of the coral Seriatopora hystrix from hydrodynamic and genetic networks

The exchange of genetic information between coral reefs through the transport of larvae can be described in terms of networks that capture the linkages between distant populations. A key question arising from these networks is the determination of the highly connected modules (communities). Communities can be defined using genetic similarity or distance statistics between multiple samples but due to limited specimen sampling capacity the boundaries of the communities for the known coral reefs in the seascape remain unresolved. In this study we use the microsatellite composition of individual corals to compare sample populations using a genetic dissimilarity measure (F_ST) which is then used to create a complex network. This network involved sampling 1025 colonies from 22 collection sites and examining 10 microsatellites loci. The links between each sampling site were given a strength that was created from the pair wise F_ST values. The result is an undirected weighted network describing the genetic dissimilarity between each sampled population. From this network we then determined the community structure using a leading eigenvector algorithm within graph theory. However, given the relatively limited sampling conducted, the representation of the regional genetic structure was incomplete. To assist with defining the boundaries of the genetically based communities we also integrated the communities derived from a hydrodynamic and distance based networks. The hydrodynamic network, though more comprehensive, was of smaller spatial extent than our genetic sampling. A Bayesian Belief network was developed to integrate the overlapping communities. The results indicate the genetic population structure of the Great Barrier Reef and provide guidance on where future genetic sampling should take place to complete the genetic diversity mapping.     

Analytical solution for katabatic flow induced by an isolated cold strip

An analytical model for katabatic flow induced by cold strip of finite width in the cross-slope direction but of infinite extent in the downslope direction is presented. The fluid is assumed to have a constant (eddy) viscosity, and the Coriolis force is neglected. A numerical simulation has been used to verify the model, which is shown to revert to the classical Prandtl model if the strip width goes to infinity. The effects of the strip width and slope angle on the katabatic flow are studied. The buoyancy and downslope velocity reach maximum values at the centre of the strip, and spread outwards in the cross-slope direction. The downslope wind maximum weakens for narrow strips and shallow slopes. In contrast to the Prandtl solution, which shows a counter flow above the wind maximum, our model predicts the counter flow to occur outside the strip. The cross-slope variation in the surface forcing induces cross-slope and slope-normal velocities, which are manifested in vortices at the strip edges. Below the wind maximum, the fluid above the cooling surface descends and moves toward the strip edge where it is detrained from the strip region. Replenishment of fluid into the strip region takes place above the wind maximum.     

Influence of farm resource endowment on possibilities for sustainable development: a case study for vegetable farms in South Uruguay

In different parts of the world, there is an urgent need for redesigning and innovating farming systems. Such a process may be supported by model-based explorations that enable ex-ante evaluation of a broad range of alternatives. Since a variety of viable patterns of farm development exists related to farm resource endowment and farmer's strategy, model-based explorations should be able to capture the existing variation in resource endowment and strategies in order to have impact on strategic farm management. In this paper, we present an overview of the model-based explorative method based on the MILP model Farm Images, applied to explore options for sustainable development of vegetable farms in Canelón Grande, Uruguay. The method is used to gain insight into the impact of current farm resource endowment on the possibilities for sustainable development and on the resource use efficiency at farm scale. We maximized farm income for 128 different farm types in an environment-oriented scenario and in an income-oriented scenario. Farm types were defined by combining 4 farm sizes, 2 labor endowments, 4 irrigation endowments, 2 soil quality combinations and 2 mechanization levels. The results demonstrate a strong impact of farm resource endowment on possibilities for sustainable development, as well as synergy between labor, land and irrigated area on resource-use efficiency at farm scale. Farms with 10ha of land or less, representing 47% of the farms in the Canelón Grande region, could only achieve a family income higher than the average income of Uruguayan families when the irrigated area was ca. 40% of the farm area. The achievement of environmental targets was less costly in terms of income on farms with a low rather than high labor availability per unit area and on farms with irrigation facilities.     

Bio fuel ash in a road construction: impact on soil solution chemistry

Limited natural resources and landfill space, as well as increasing amounts of ash produced from incineration of bio fuel and municipal solid waste, have created a demand for useful applications of ash, of which road construction is one application. Along national road 90, situated about 20 km west of Sollefteå in the middle of Sweden, an experiment road was constructed with a 40 cm bio fuel ash layer. The environmental impact of the ash layer was evaluated from soil solutions obtained by centrifugation of soil samples taken on four occasions during 2001–2003. Soil samples were taken in the ash layer, below the ash layer at two depths in the road and in the ditch. In the soil solutions, pH, conductivity, dissolved organic carbon (DOC) and the total concentration of cations (metals) and anions were determined. Two years after the application of the ash layers in the test road, the concentrations in the ash layer of K, SO₄, Zn, and Hg had increased significantly while the concentration of Se, Mo and Cd had decreased significantly. Below the ash layer in the road an initial increase of pH was observed and the concentrations of K, SO₄, Se, Mo and Cd increased significantly, while the concentrations of Cu and Hg decreased significantly in the road and also in the ditch. Cd was the element showing a potential risk of contamination of the groundwater. The concentrations of Ca in the ash layer indicated an ongoing hardening, which is important for the leaching rate and the strength of the road construction.     

The effect of summer drought on the predictability of local extinctions in a butterfly metapopulation

The ecological impacts of extreme climatic events on population dynamics and community composition are profound and predominantly negative. Using extensive data of an ecological model system, we tested whether predictions from ecological models remain robust when environmental conditions are outside the bounds of observation. We observed a 10-fold demographic decline of the Glanville fritillary butterfly (Melitaea cinxia) metapopulation on the Åland islands, Finland in the summer of 2018 and used climatic and satellite data to demonstrate that this year was an anomaly with low climatic water balance values and low vegetation productivity indices across Åland. Population growth rates were strongly associated with spatiotemporal variation in climatic water balance. Covariates shown previously to affect the extinction probability of local populations in this metapopulation were less informative when populations were exposed to severe drought during the summer months. Our results highlight the unpredictable responses of natural populations to extreme climatic events.     

Comparison of SOC estimates and uncertainties from aerosol chemical composition and gas phase data in Atlanta

In the Southeastern US, organic carbon (OC) comprises about 30% of the PM_2.5 mass. A large fraction of OC is estimated to be of secondary origin. Long-term estimates of SOC and uncertainties are necessary in the evaluation of air quality policy effectiveness and epidemiologic studies. Four methods to estimate secondary organic carbon (SOC) and respective uncertainties are compared utilizing PM_2.5 chemical composition and gas phase data available in Atlanta from 1999 to 2007. The elemental carbon (EC) tracer and the regression methods, which rely on the use of tracer species of primary and secondary OC formation, provided intermediate estimates of SOC as 30% of OC. The other two methods, chemical mass balance (CMB) and positive matrix factorization (PMF) solve mass balance equations to estimate primary and secondary fractions based on source profiles and statistically-derived common factors, respectively. CMB had the highest estimate of SOC (46% of OC) while PMF led to the lowest (26% of OC). The comparison of SOC uncertainties, estimated based on propagation of errors, led to the regression method having the lowest uncertainty among the four methods. We compared the estimates with the water soluble fraction of the OC, which has been suggested as a surrogate of SOC when biomass burning is negligible, and found a similar trend with SOC estimates from the regression method. The regression method also showed the strongest correlation with daily SOC estimates from CMB using molecular markers. The regression method shows advantages over the other methods in the calculation of a long-term series of SOC estimates.     

Measuring the radium quartet (Ra, Ra, Ra, Ra) in seawater samples using gamma spectrometry

Radium isotopes are widely used in marine studies (eg. to trace water masses, to quantify mixing processes or to study submarine groundwater discharge). While ²²⁸Ra and ²²⁶Ra are usually measured using gamma spectrometry, short-lived Ra isotopes (²²⁴Ra and ²²³Ra) are usually measured using a Radium Delayed Coincidence Counter (RaDeCC). Here we show that the four radium isotopes can be analyzed using gamma spectrometry. We report ²²⁶Ra, ²²⁸Ra, ²²⁴Ra, ²²³Ra activities measured using low-background gamma spectrometry in standard samples, in water samples collected in the vicinity of our laboratory (La Palme and Vaccarès lagoons, France) but also in seawater samples collected in the plume of the Amazon river, off French Guyana (AMANDES project). The ²²³Ra and ²²⁴Ra activities determined in these samples using gamma spectrometry were compared to the activities determined using RaDeCC. Activities determined using the two techniques are in good agreement. Uncertainties associated with the ²²⁴Ra activities are similar for the two techniques. RaDeCC is more sensitive for the detection of low ²²³Ra activities. Gamma spectrometry thus constitutes an alternate method for the determination of short-lived Ra isotopes.     

Quantifying the influence of humic acid adsorption on colloidal microsphere deposition onto iron-oxide-coated sand

This article describes an approach for quantifying microsphere deposition onto iron-oxide-coated sand under the influence of adsorbed Suwannee River Humic Acid (SRHA). The experimental technique involved a triple pulse injection of model latex microspheres (microspheres) in pulses of (1) microspheres, followed by (2) SRHA, and then (3) microspheres, into a column filled with iron-coated quartz sand as a water-saturated porous medium. A random sequential adsorption model (RSA) simulated the gradual rise in the first (microsphere) breakthrough curve (BTC). Using the same model calibration parameters a dramatic increase in concentration at the start of the second particle BTC, generated after SRHA injection, could be simulated by matching microsphere concentrations to extrapolated RSA output. RSA results and microsphere/SRHA recoveries showed that 1 μg of SRHA could block 5.90 ± 0.14 × 10⁹ microsphere deposition sites. This figure was consistent between experiments injecting different SRHA masses, despite contrasting microsphere deposition/release regimes generating the second microsphere BTC.     

The influence of the North-Föhn on tracer organic compounds in ambient air PM10 at a pre-alpine site in Northern Italy

The ambient air in Northern Italy is characterised by relatively high PAH and PM₁₀ concentrations in relation to calm wind and intensive temperature inversions, especially during cold periods. These stagnant conditions are occasionally interrupted by North-Föhn events, which cause a drop in relative humidity and an increase in O₃ levels, indicating the mixing of local and free troposphere air flows. In this study the influence of the North-Föhn on concentrations of tracer organic compounds, including polycyclic aromatic hydrocarbons (PAHs), PM₁₀, O₃ and black carbon (BC) was studied during a North-Föhn event in November 2007. Large fluctuations in the concentration of these compounds, as well as changes in PM₁₀ composition due to daytime and night-time variations of local source emissions were observed. Although these events occur at low frequencies (6-10%) they can for short periods, strongly affect the regional air quality by quickly decreasing the concentrations of these tracer organic compounds.     

Experimental field estimation of organic nitrogen formation in tree canopies

The content of organic N has been shown in many studies to increase during the passage of rain water through forest canopies. The source of this organic N is unknown, but generally assumed to come from canopy processing of wet or dry-deposited inorganic N. There have been very few experimental studies in the field to address the canopy formation or loss of organic N. We report two studies: a Scots pine canopy exposed to ammonia gas, and a Sitka spruce canopy exposed to ammonium and nitrate as wet deposition. In both cases, organic N deposition in throughfall was increased, but only represented a small fraction (<10%) of the additional inorganic N supplied, suggesting a limited capacity for net organic N production, similar in both conifer canopies under Scottish summertime conditions, of less than 1.6 mmol N m⁻² mth⁻¹ (equivalent to 3 kg N ha⁻¹ y⁻¹).