Genetic differentiation ofMytilus edulis in eastern North America

There is significant differentiation at five polymorphic loci ofMytilus edulis among certain geographical areas of the Atlantic coast of North America. Non-metric multidimensional numerical methods distinguished three population groups: (I) populations south of Cape Cod, (II) populations throughout the Gulf of Maine, Gulf of St. Lawrence, areas of both southern and northern Newfoundland, and southern Hudson Bay, and (III) populations in southeastern Nova Scotia, northern Newfoundland and Hudson Strait, Quebec. Each subset consists of populations that exhibit characteristic multilocus, multiple allele genotypes. Populations in Groups II and III are spatially interdigitated among each other. At least one geographical area of mixing between genetically distinct populations occurs in northeastern Newfoundland. There is no evidence for interbreeding among genetically distinct individuals in mixed populations, suggesting the possibility that populations in the Atlantic Canadian Provinces and areas of northern Canada may consist of two distinct species.     

Effect of Forest Fragmentation on Genetic Diversity and Mating System in a Tropical Tree, Pithecellobium elegans

Genetic diversity, population differentiation, and temporal variation in outcrossing rates were examined for Pithecellobium elegans , a Neotropical rain forest canopy tree. Several forest fragments and a large reserve (1500 ha) were compared for several population genetic parameters. For eight populations sampled on the Atlantic coastal plain of Costa Rica, allozyme heterozygosity (0.13), polymorphism (35%), and effective number of alleles (1.24) were similar to values reported for other tropical tree species that occur at similar densities of less than one individual per hectare. These measures of genetic variation were lowest in populations of the smallest size, farthest from the reserve, and more isolated from other populations. Differentiation among samples collected in small forest fragments and the reserve population accounted for 10% of the total genetic variation observed. There was a positive relationship between the level of differentiation of populations from the reserve population and their distance from the reserve. Though predominantly an annually flowering species, the number of trees in flower at any one time varied from 80% of observed trees to only 6%. Outcrossing rates did not differ for two episodes in which the proportions of flowering trees were 33% and 80%. But periods of low density of flowering adults resulted in poor seed crops or failure to set fruit for many individuals. Population size at many sites will be effectively decreased because of the variation in flowering. Fragmentation of what was once a large, continuous forested area is resulting in genetic erosion of small, isolated populations of Pithecellobium elegans .     

Transfer of radioactive carbon within the copepod Temora longicornis

Standard autoradiographic techniques have been used to describe the temporal pattern in the transfer of radioactive carbon from the chlorophyte Tetraselmis suesica (Kylin) to females of the neritic copepod Temora longicornis (Müller, 1792). After 4 and 6 h exposure to labelled phytoplankton, silver grains were deposited only in the cells of the gut-wall. After 24 h exposure, grains were deposited in most tissues, with highest concentrations in cells of the gut-wall and in oocytes within the ovary. Experiments with Centropages typicus (Krøyer), Centropages hamatus (Lilljeborg), and Labidocera aestiva Wheeler demonstrated that much of the assimilated label was not turning over rapidly and that the amount of label assimilated was correlated with known food preferences of these species.     

Analysis of Historical Salinity and Boron Surface Water Monitoring Data from the San Joaquin River Watershed: 1985–2002

The objectives of this study were to use both parametric and probabilistic approaches to analyze water column concentrations of both salinity (24,845 measurements) and boron (13,028 measurements) from numerous investigations conducted in the San Joaquin River watershed from 1985 to 2002 to assess spatial and temporal trends and determine the probability of exceeding regulatory targets during both the irrigation and non-irrigation season. Salinity and boron concentrations from 26 mainstem and tributary sites were highly correlated based on this 17 yr data set. Generally, salinity and boron concentrations were higher in winter/spring and lower in summer/fall; higher concentrations of both constituents were reported in tributary sites when compared with the mainstem San Joaquin River. Approximately half the sites showed showed a negative correlation between flow and both constituents. Concentrations of both salinity and boron were somewhat variable with flow conditions for the other sites. Both linear and curvilinear trends were inconsistent over time. The salinity 90th centiles for the 26 sites ranged from 143 to 7,559 micros cm(-1) with the highest 90th centiles in tributary sites. Probabilistic analysis of salinity 90th centiles by year for five sites with extensive data showed a significant decrease over time at two sites and no significant trend for the other three sites. The probability of exceeding the salinity targets during either the irrigation (700 microm cm(-1)) or non-irrigation (1,000 micros cm(-1)) season was greater than 19% for all but three sites. The boron 90th centiles for the 26 sites ranged from 0.41 to 13.6 mg L(-1) with the highest 90th centiles from tributary sites. Probabilistic analysis of the boron 90th centile values by year for the five sites with the most extensive data showed a significant decrease over time at two sites and no significant trend for the other three sites. The probability of exceeding the boron target during the irrigation season (0.80 mg L(-1)) and non-irrigation (1.0 mg L(-1)) season was greater that 18% for all but three sites. Results from this analysis have important regulatory implications as targets for both salinity and boron are frequently exceeded at various sites in the San Joaquin River watershed.     

Monitoring contaminant exposure: Relative concentrations of organochlorines in three tissues of American black ducks

Comparison of organochlorine residues in wildlife must often be made to regulatory standards or to values of known biological significance; this is difficult when dissimilar tissues are analyzed and results are expressed on different bases. To relate levels in the different tissues used for regulatory and monitoring purposes and for biological assessments, we exposed American black ducks to mixtures of three organochlorines. Differences in residue burdens among tissues were not statistically significant when levels were expressed on a lipid weight basis. Levels of heptachlor and Aroclor 1254 in one tissue can be accurately predicted from those in another; such predictions for endrin are less reliable. Lipid weight based residue concentrations in wings may be used to predict whether levels in fat exceed residue standards set for human health or approach those associated with effects on populations of species sampled.     

Evolution through cold and deep waters: the molecular phylogeny of the Lithodidae (Crustacea: Decapoda)

The objectives of this work are to use gene sequence data to assess the hypothesis that the Lithodinae arose from ancestors with uncalcified abdomens in shallow waters of the North-East Pacific, investigate the monophyly and interrelationships of genera within the Lithodinae and to estimate the scale and minimum number of biogeographic transitions from the shallow environment to the deep sea and vice versa. To do this, phylogenetic analysis from three mitochondrial and three nuclear markers was conducted using minimum evolution, maximum likelihood and Bayesian methods. The Lithodinae as defined to include North Pacific genus Cryptolithodes may be paraphyletic, with the Hapalogastrinae and Cryptolithodes as sister taxa. This implies that the soft-bodied abdomen of the Hapalogastrinae might not be plesiomorphic for the Lithodidae. Paralomis, Lopholithodes, Phyllolithodes, Lithodes and Neolithodes share a common ancestor, from which the North Pacific Hapalogastrinae did not descend. Lithodid ancestors are likely to have had a north Pacific, shallow water distribution and to have had planktotrophic larvae. North Pacific genus Paralithodes is paraphyletic; P. brevipes is the most basal member of the genus (as sampled) while P. camtschaticus and P. platypus are more closely related to the genera Lithodes and Neolithodes. Genera Lithodes, Neolithodes and Paralomis (as sampled) are monophyletic if Glyptolithodes is included within Paralomis. Lopholithodes is closely related to, but not included within, the Paralomis genus. Paralomis is divided into at least two major lineages: one containing South Atlantic, West African, and Indian Ocean species, and the other containing Pacific and South American species. Several species of Paralomis do not resolve consistently with any other groups sampled, implying a complex and possibly rapid global evolution early in the history of the genus. Relationships within the Lithodes genus vary between analytical methods, suggesting that conclusions may not be stable. Consistently, however, Indian Ocean and Pacific forms—L. murrayi, L. longispina and L. nintokuae form a group separated from Atlantic species such as L. santolla, L. confundens, L. maja and L. ferox.     

Maryland Biological Stream Survey: Development of a Fish Index of Biotic Integrity

As a step towards determining the extent of degradation in non-tidal streams, a multi-metric Index of Biotic Integrity (IBI) based on fish assemblages was developed for the Maryland Biological Stream Survey (MBSS). The MBSS is a probability-based statewide sampling program designed to assess the status of biological resources and to evaluate the effects of anthropogenic activities. We used data from 419 MBSS sites sampled in 1994-95 to develop the IBI. Two distinct geographic strata, corresponding with ecoregional and physiographic boundaries, were identified via cluster analysis and multivariate analysis of variance (MANOVA) as supporting distinctly different species groups. Reference conditions were based on minimally degraded sites. We quantitatively evaluated the ability of various attributes of the fish assemblage (candidate metrics) to discriminate between these reference sites and sites known to be degraded, using statistical tests and classification efficiency. Provisional formulations of the IBI were selected for each region based on high classification efficiency and broad representation of fish assemblage attributes. Fish IBI scores for 1995 MBSS sites spanned a wide range of biological conditions, from good to very poor. Over all six basins sampled in 1995, half of the stream miles fell into the range of good to fair. Roughly 25% of stream miles showed some degradation. The IBI will be used in conjunction with physical and chemical data to answer critical questions about the health of Maryland streams and the relative impacts of human-induced stresses on the state's aquatic systems.     

Effects of forms and rates of potassium fertilizers on cadmium uptake by two cultivars of spring wheat (Triticum aestivum, L.)

A greenhouse pot experiment was conducted to study the influence of potassium fertilizers in different forms and rates on cadmium (Cd) uptake by two cultivars of spring wheat (Triticum aestivum, L.): Brookton and Krichauff. Potassium fertilizers were added to soil at four levels: 0, 55, 110 and 166 mg K kg(-1) soil as KNO(3) (N), KCl (C) or K(2)SO(4) (S). CdCl(2) was added to all the treatments at a uniform rate equivalent to 15 mg Cd kg(-1) soil. Plant shoot and root dry weights (DW) of both cultivars were reduced significantly by the addition of K-fertilizer in C and S treatments but there were only marginal changes in the N treatments. The Cd concentrations in shoots and whole plants increased significantly (P<.001) with increasing K addition, from 37.5 to 81.4 mg kg(-1) and from 42.9 to 86.8 mg kg(-1) for Brookton and Krichauff, respectively. However, no obvious effect was observed in the N treatments, except for the highest K level (K3) where there was a sharp increase in Cd concentration compared to the lower additions. Forms of K-fertilizers significantly influenced the Cd concentrations in plant shoots and roots (P<.001), but there was no significant difference between C and S treatments. This experiment showed that anions Cl(-) and SO(4)(2-) increase Cd uptake by plants, which can be interpreted as Cl(-) and SO(4)(2-) complexing readily with Cd(2+) and thereby increasing the bioavailability of Cd(2+) in soils. The effect of potassium itself on plant uptake of Cd was also observed. We suggest that when applying potassium fertilizer to Cd-contaminated soils, the forms and rates should be considered.     

Effects of sheltering fish on growth of their host corals

Stony corals are the foundation species of tropical reefs, and their structures can harbor a diverse range of mutualist taxa that can confer important benefits, including provision of nutrients. Prominent among the associates of branching coral in the genus Pocillopora are groups of zooplanktivorous damselfishes that take refuge in the coral to avoid their predators. In field and laboratory experiments, we explored the effects of colonies of resident damselfishes on growth of their host corals. Laboratory studies revealed a positive relationship between biomass of fish and output of ammonium. In the field, levels of ammonium were significantly elevated in the water surrounding the branches of Pocillopora occupied by colonies of damselfish, particularly in time periods following active feeding by the fish. Experimental manipulation of the presence of fish on host corals during a month-long field experiment revealed that corals hosting fish grew significantly more than those that lacked fish, and coral growth was positively correlated with the biomass of resident fish. The Pocillopora colonies in the field experiment varied in the degree of openness of their branching structure, and dye studies indicated that this affected their ability to retain waterborne nutrients. Together with biomass of resident fish, colony openness explained 76% of the variation in coral growth rate during the experiment. Corals can exhibit considerable morphological variability, and mutualistic fish respond to colony architecture during habitat selection, with some species preferring more open-branched forms. This makes it likely that corals may face tradeoffs in attracting resident fish and in retaining the nutrients they provide.     

Characterizing source-sink dynamics with genetic parentage assignments

Source-sink dynamics have been suggested to characterize the population structure of many species, but the prevalence of source-sink systems in nature is uncertain because of inherent challenges in estimating migration rates among populations. Migration rates are often difficult to estimate directly with demographic methods, and indirect genetic methods are subject to a variety of assumptions that are difficult to meet or to apply to evolutionary timescales. Furthermore, such methods cannot be rigorously applied to high-gene-flow species. Here, we employ genetic parentage assignments in conjunction with demographic simulations to infer the level of immigration into a putative sink population. We use individual-based demographic models to estimate expected distributions of parent-offspring dyads under competing sink and closed-population models. By comparing the actual number of parent-offspring dyads (identified from multilocus genetic profiles) in a random sample of individuals taken from a population to expectations under these two contrasting demographic models, it is possible to estimate the rate of immigration and test hypotheses related to the role of immigration on population processes on an ecological timescale. The difference in the expected number of parent-offspring dyads between the two population models was greatest when immigration into the sink population was high, indicating that unlike traditional population genetic inference models, the highest degree of statistical power is achieved for the approach presented here when migration rates are high. We used the proposed genetic parentage approach to demonstrate that a threatened population of Marbled Murrelets (Braclhyrarmphus marmotus) appears to be supplemented by a low level of immigration (approximately 2-6% annually) from other populations.