Real-time quantification of mcrA, pmoA for methanogen, methanotroph estimations during composting

Composting is the controlled biological decomposition of organic matter by microorganisms during predominantly aerobic conditions. It is being increasingly adopted due to its benefits in nutrient recycling, soil reclamation, and urban land use. However, it poses an environmental concern related to its contribution to greenhouse gas production. During composting, activities of methanogenic and methanotrophic communities influence the net methane (CH4) release into the atmosphere. Using quantitative polymerase chain reaction (qPCR), this study was aimed at assessing the changes in the methyl-coenzyme M reductase (mcrA) and particulate methane monooxygenase (pmoA) copy numbers for estimation of methanogenic and methanotrophic communities, respectively. Open-windrow composting of beef cattle (Bos Taurus L.) manure with temperatures reaching > 55 degrees C was effective indegrading commensal Escherichia coli within the first week. Quantification of community DNA revealed significant differences in mcrA and pmoA copy numbers between top and middle sections. Consistent mcrA copy numbers (7.07 to 8.69 log copy number g(-1)) were detected throughout the 15-wk composting period. However, pmoA copy number varied significantly over time, with higher values during Week 0 and 1 (6.31 and 5.41 log copy number g(-1), respectively) and the lowest at Week 11 (1.6 log copy number g(-1)). Net surface CH4 emissions over the 15-wk period were correlated with higher mcrA copy number. Higher net ratio of mrA: pmoA copy numbers was observed when surface CH4 flux was high. Our results indicate that mcrA and pmoA copy numbers vary during composting and that methanogen and methanotroph populations need to be examined in conjunction with net CH4 emissions from open-windrow composting of cattle feedlot manure.     

Time dependent influx and efflux of phenol by immobilized microbial consortium

Phenol, like many other organic solvents, is toxic to micro-organisms even at low concentrations. However, some micro-organisms can withstand this toxicity to a certain concentration. To observe the uptake mechanism of phenol, bacteria were isolatedfrom a petroleum refinery effluent and identified. Study was carried out to understand the effect of varying sub-lethal concentrations of phenol, on all the isolated individual bacterial cultures. Out of the bacteria isolated, Serratia liquefaciens was found to tolerate phenol concentration up to 1500 mg l^-1. A microbial consortium of the isolated bacteriawas formulated and immobilized. Individual cultures were also immobilized and uptake of phenol by the immobilized micro-organisms was observed in a nutrient-rich and nutrient-stressed medium containing phenol as a sole source of carbon. A time-dependent uptake of phenol was exhibited by the micro-organismsin nutrient-stressed medium, after which a sudden increase in phenol concentration occurred in the extracellular medium, till it reached back to the initial concentration. This was attributedto an active efflux mechanism adopted by the micro-organisms to withstand the toxic shock.     

Indoor radon/thoron levels and inhalation doses to some populations in Himachal Pradesh, India

It is well established that some areas of Himachal Pradesh (H.P.) state of India situated in the environs of the Himalayan mountains are relatively rich in uranium-bearing minerals. Some earlier studies by our group have indicated high levels of radon (>200 Bq m(-3)) in the dwellings. It is in this context that an indoor radon/thoron survey has been carried out in selected villages of four districts in the state of H.P. This survey has been conducted as a part of a national, coordinated project using twin chamber dosemeter cups designed by the Environmental Assessment Division (EAD), Department of Atomic Energy, Govt. of India. The track-etch technique is used for calibration of plastic detector LR-115 type-II which are employed for recording alpha tracks due to radon/thoron and their daughters. Year long radon/thoron data have been collected for seasonal correlations of indoor radon/thoron in the dwellings. The indoor radon levels have been found to vary from a minimum value of 17.4 Bq m(-3) to a maximum value of 140.3 Bq m(-3). The indoor thoron levels vary from a minimum value of 5.2 Bq m(-3) to a maximum value of 131.9 Bq m(-3). The year average dose rate for the local population varies from 0.03 microSv h(-1) to 0.83 microSv h(-1). The annual exposure dose to inhabitants in all the dwellings lies below the upper limit of 10 mSv given in ICRP-65.     

Transcriptome analysis provides insights for understanding the adverse effects of endosulfan in Drosophila melanogaster

Indiscriminate use of agrochemicals worldwide, particularly, persistent organic pollutants (POPs), is of concern. Endosulfan, a POP, is used by various developing/developed nations and is known to adversely affect the development and the hormonal profiles of humans and animals. However, little is known about the molecular players/pathways underlying the adverse effects of endosulfan. We therefore analyzed the global gene expression changes and subsequent adverse effects of endosulfan using Drosophila. We used Drosophila melanogaster keeping in view of its well annotated genome and the wealth of genetic/molecular reagents available for this model organism. We exposed third instar larvae of D. melanogaster to endosulfan (2.0 μg mL⁻¹) for 24 h and using microarray, we identified differential expression of 256 genes in exposed organisms compared to controls. These genes are associated with cellular processes such as development, stress and immune response and metabolism. Microarray results were validated through quantitative PCR and biochemical assay on a subset of genes/proteins. Taking cues from microarray data, we analyzed the effect of endosulfan on development, emergence and survival of the organism. In exposed organisms, we observed deformities in hind-legs, reminiscent of those observed in higher organisms exposed to endosulfan. In addition, we observed delayed and/or reduced emergence in exposed organisms when compared to their respective controls. Together, our studies not only highlight the adverse effects of endosulfan on the organism but also provide an insight into the possible genetic perturbations underlying these effects, which might have potential implications to higher organisms.     

Evaluation of hexachlorocyclohexane contamination from the last lindane production plant operating in India

Purpose

??-Hexachlorocyclohexane (HCH), ??-HCH, and lindane (??-HCH) were listed as persistent organic pollutants by the Stockholm Convention in 2009 and hence must be phased out and their wastes/stockpiles eliminated. At the last operating lindane manufacturing unit, we conducted a preliminary evaluation of HCH contamination levels in soil and water samples collected around the production area and the vicinity of a major dumpsite to inform the design of processes for an appropriate implementation of the Convention.

Methods

Soil and water samples on and around the production site and a major waste dumpsite were measured for HCH levels.

Results

All soil samples taken at the lindane production facility and dumpsite and in their vicinity were contaminated with an isomer pattern characteristic of HCH production waste. At the dumpsite surface samples contained up to 450?g?kg^?1 ?? HCH suggesting that the waste HCH isomers were simply dumped at this location. Ground water in the vicinity and river water was found to be contaminated with 0.2 to 0.4?mg?l^?1 of HCH waste isomers. The total quantity of deposited HCH wastes from the lindane production unit was estimated at between 36,000 and 54,000?t.

Conclusions

The contamination levels in ground and river water suggest significant run-off from the dumped HCH wastes and contamination of drinking water resources. The extent of dumping urgently needs to be assessed regarding the risks to human and ecosystem health. A plan for securing the waste isomers needs to be developed and implemented together with a plan for their final elimination. As part of the assessment, any polychlorinated dibenzo-p-dioxins and dibenzofurans (PCDD/PCDF) generated during HCH recycling operations need to be monitored.     

Biochemical responses in tree foliage exposed to coal-fired power plant emission in seasonally dry tropical environment

A biomonitoring study was conducted to investigate the responses of plants exposed to power plant emission in a dry tropical environment. For this purpose, five sampling sites were selected in the prevailing wind direction (NE) at different distance to thermal power plant (TPP) within 8.0 km range and a reference site was selected in eastern direction at a distance of 22.0 km. The two most common tree species, Ficus benghalensis L. (Evergreen tree) and Dalbergia sisso Roxb. (deciduous tree) were selected as test plants. Ambient sulphur dioxide (SO(2)), nitrogen dioxide (NO(2)), suspended particulate matter (SPM), respirable suspended particulate matter (RSPM), dust-fall rate (DFR) and plant responses such as leaf pigments (chlorophyll a, chlorophyll b and carotenoids), ascorbic acid, sugar and sulphate-sulphur (SO4(2-)-S) contents were measured. Ambient SO(2), NO(2), SPM, RSPM and DFR showed significant spatial and temporal variation at different sites. Considerable reduction in pigment (chlorophyll a, chlorophyll b and carotenoids) and sugar contents were observed at sites receiving higher pollution load. Ascorbic acid exhibited significant positive correlation with pollution load. Accumulation of SO4(2-)-S in leaf tissue showed significant positive correlation with ambient SO(2) concentration at all the sites. At the same time, SO4(2-)-S showed significant negative correlation with pigment and sugar content. D. sisso Roxb. tree was found to be more sensitive as compared to F. benghalensis L. tree.     

Kinetics of sorption of lead on bed sediments of River Hindon, India

A number of low cost waste sorbent have been used for removal of heavy metals, however, few studies have been carried out on the sorption process on riverbed sediments in their natural state of occurrence. Stream sediments adsorb certain solutes from streams, thereby significantly changing the solute composition, but little is known about quantitatively describing sorption phenomena and rates of these processes. In the present investigation, sorption of lead ions on river bed sediments of river Hindon, a tributary of river Yamuna, India has been studied to demonstrate the role of bed sediments in controlling metal pollution. The effect of various operating variables, viz., initial concentration, solution pH, sediment dose, contact time and particle size has been studied. The sorption of lead ions increased with respect to pH and sorbent dose and decreased with sorbent particle size. Two important geochemical phases, iron and manganese oxide, also play important role in the sorption process. The sorption data were analysed using Langmuir and Freundlich isotherm models to determine the mechanistic parameters related to the sorption process. Further, although lead ions have more affinity for the fine fraction of the sediment, but the overall contribution of coarser fraction to sorption is more as compared to clay and silt fraction. The kinetic data suggest that the sorption of lead on bed sediments is an endothermic process, which is spontaneous at low temperature. The uptake of lead is controlled by both bulk and intraparticle diffusion mechanism.     

Fluoride occurrence and assessment of exposure dose of fluoride in shallow aquifers of Makur, Unnao district Uttar Pradesh, India

The water samples from the shallow aquifers of Makur, Unnao district, Uttar Pradesh, was analyzed for fluoride content (F( - )) and other water quality parameters such as pH, EC, CO(3) (2-), HCO(3) (-), Cl( - ), Na( + ), Ca(2 + ), Mg(2 + ) and RSC. It was found that the F( - ) concentration of water varied between 1.05 to 13.9 mgl( - 1) which exceeded the maximum desirable limits of 1.0 mgl( - 1) of F( - ) as laid down by BIS and 68% of water exceeded maximum permissible limits of 1.5 mgl( - 1) as prescribed by WHO. The correlation study of fluoride indicated that F( - ) has a significant (p < 0.05) positive relationship with pH (r = +0.59) and RSC (r = 0.54), while a significant negative correlation with Ca+Mg (r = -0.53) and Mg (r = -0.49). The exposure doses of fluoride in infants was found between 0.35 to 3.26 mg kg( - 1)day( - 1) (if dug well water was used) whereas 0.36 to 4.63 mg kg( - 1)day( - 1) (when shallow hand pumps) The exposure doses of water in case of children (20 kg body weight) varied between 0.157 to 1.47 mg kg( - 1)day( - 1) (for dugwell) and 0.162 to 2.08 mg kg( - 1)day( - 1) (for shallow hand pumps) whereas in case of adults (70 kg body weight), it varied between 0.09 to 0.839 mg kg( - 1)day( - 1) (for dugwell) and 0.092 to 1.19 mg kg( - 1)day( - 1) (shallow hand pumps) which is quite high against the standard value of 0.05 mg/kg/day which is the minimum risk level (MRL) calculated by the Agency for Toxic Substances and Disease Registry (ATSDR). The maximum exposure dose to fluoride for adults in the study area found to be 23.8 times higher than the ATSDR's MRL.     

Ferrate(VI) enhanced photocatalytic oxidation of pollutants in aqueous TiO<Subscript>2</Subscript> suspensions

Background, aim and scope  

Photocatalytic oxidation using UV irradiation of TiO₂ has been studied extensively and has many potential industrial applications, including the degradation of recalcitrant contaminants in water and wastewater treatment. A limiting factor in the oxidation process is the recombination of conduction band electrons (e ⁻ _cb) with electron holes (h_vb⁺) on the irradiated TiO₂ surface; thus, in aqueous conditions, the presence of an effective electron scavenger will be beneficial to the efficiency of the oxidation process. Ferrate (FeO₄²⁻) has received much recent attention as a water treatment chemical since it behaves simultaneously as an oxidant and coagulant. The combination of ferrate [Fe(VI)] with UV/TiO₂ photocatalysis offers an oxidation synergism arising from the Fe(VI) scavenging of e ⁻ _cb and the corresponding beneficial formation of Fe(V) from the Fe(VI) reduction. This paper reviews recent studies concerning the photocatalytic oxidation of problematic pollutants with and without ferrate.